mRNA_F-serratus_M_contig855.19944.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Match: D7FJI0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI0_ECTSI) HSP 1 Score: 255 bits (652), Expect = 1.150e-74 Identity = 140/241 (58.09%), Postives = 180/241 (74.69%), Query Frame = 2
Query: 2168 GTDGPETSFGSVGGPFATESPQETTSAKDEQKLTP-SGLSSLSSSQELFASLEKERLEEATAGAKSRSRKVPGPTWANIGHGGECHNAGTEESASIYAHPEDRFTTTNSERFGPLMREKHIEKGRRSPWFYRRRVGDAAAVASARQQRSEIRSNKIRQHLERIALSVKAEEIEARLKDERHIRGMARLRLRYGKWANSVDTWHANEAPRLADFSKRQFPEQMTRFRGGQQVFELLGGDSTI 2887
G DG TSFGS GGPFA QE + E L+P + L+SLSS +LF+SLE+ RL++ATAGA +R+RKV TWA+IGHGG ++AGT+ES+S YA P +RFTTTNSER+ PL++ K IEKG+RS F R+R+GD+A AS R Q+SE RS K+++H+ERI+LSVK EE+ ARLK+ER +RG AR RLRY +W NS+D W +E P+LAD+ KRQFP Q +R RGGQQ+ E LGG I
Sbjct: 13 GKDGASTSFGSEGGPFAEAPLQE----QGEGSLSPKTSLASLSSCHDLFSSLEEGRLQDATAGALARARKVAKQTWADIGHGGIGNDAGTDESSSFYACPSERFTTTNSERYAPLIKMKKIEKGQRSAGFCRQRLGDSATEASRRMQKSEDRSIKLKEHMERISLSVKTEEVAARLKEERRVRGKARTRLRYSRWVNSMDNWLGDEVPKLADYDKRQFPVQSSRIRGGQQMHEALGGPMAI 249
BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Match: D7FJI1_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJI1_ECTSI) HSP 1 Score: 220 bits (560), Expect = 2.310e-61 Identity = 117/209 (55.98%), Postives = 151/209 (72.25%), Query Frame = 2
Query: 1277 KSGSVELDEFAALLERAMAEKVPADTTSAWQERELPKREAVDAELRSVELQPIHDHRSQRIKNKVCHYLNKVVPHATVGLAEDRCTFLKKQFTLLHGDAPKRNTRGIRLEDLARALGPTGMNLGVSDNDLGLLMREMDTSGDGVVTLKEFAAFINLDEHEPLYHPLFDARRRNVNLLQTFVDLPPPAATPEELNIKERANQLHLAAVPS 1903
KSG +ELDEFA L ++ + + SA Q +E +++A D E RSV LQPI DH++QRIKNK+ H + + VP+A+ GLA++R FLKKQF L DA +RGI LE+L +ALGP GMNLGV+D DL LL++EMDT+ DG +T+KEFAAF+NLD+H+PLY PLFD RRRNVN+LQ V+ PP +PEE K RA+ LH AVPS
Sbjct: 72 KSGGIELDEFADFLGQSETKGASSGDPSALQ-KEKTQQQADDVEARSVTLQPIQDHKAQRIKNKLAHCVQQAVPNASTGLADNRTMFLKKQFAFLSEDAA---SRGISLENLVQALGPRGMNLGVNDEDLRLLVKEMDTNCDGNITVKEFAAFLNLDDHDPLYQPLFDGRRRNVNILQAMVEQAPPVESPEEEFFKARADHLHSVAVPS 276
BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Match: A0A7R9YBQ5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBQ5_9STRA) HSP 1 Score: 115 bits (288), Expect = 2.230e-23 Identity = 73/238 (30.67%), Postives = 123/238 (51.68%), Query Frame = 2
Query: 1076 INRACQRLGHLANIKYGSVREFFRMYDANCDGVLGFDEFSKGITMCQLDHLFPRSLQRALFDRVDTNKSGSVELDEFAALLERAMAEKVPADTTSAWQERELPKREAVDAELRSVELQPIHDHRSQRIKNKVCHYLNKVVPHATVGLAEDRCTFLKKQFTLLHGDAPKRNTRGIRLEDLARALGPTGMNLGVSDNDLGLLMREMDTSGDGVVTLKEFAAFINLDEHEPLYHPLFDARR 1789
++RA RL L +KYGSVR+FF +D N +G + +EFS+ L+ L PR QR +F+R+D ++SGS++L+EF + L R A P D R +A + V+L+ + R++ +++ + L KV + D + K T + ++ A ALGP G+N+ ++DL ++ MD + D ++ EF F+N+D+ +P Y+P +D RR
Sbjct: 164 LDRAIGRLQQLLVLKYGSVRDFFHTFDENHNGKITLEEFSRTFKRRNLERLIPRREQRLIFERLDADQSGSLDLEEFKSALTRETAFSQPLD------------RMREEAREKGVKLRRTNP-RAELVRDAL---LQKVTQRLRMSKESDSVERKTAYLLNIFKQIDKDMTGLLSADEFAAALGPGGLNVCAKEDDLRMVFEAMDVNEDERISYSEFIDFLNVDDIDPEYNPFYDGRR 385 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig855.19944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig855.19944.1 >prot_F-serratus_M_contig855.19944.1 ID=prot_F-serratus_M_contig855.19944.1|Name=mRNA_F-serratus_M_contig855.19944.1|organism=Fucus serratus male|type=polypeptide|length=798bp MDVNKLSRPGRNKRTQVGTTNRHSIFPTKALGSSSRKSRHQRRDLIRRKKback to top mRNA from alignment at F-serratus_M_contig855:43524..60116+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig855.19944.1 ID=mRNA_F-serratus_M_contig855.19944.1|Name=mRNA_F-serratus_M_contig855.19944.1|organism=Fucus serratus male|type=mRNA|length=16593bp|location=Sequence derived from alignment at F-serratus_M_contig855:43524..60116+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig855:43524..60116+ >mRNA_F-serratus_M_contig855.19944.1 ID=mRNA_F-serratus_M_contig855.19944.1|Name=mRNA_F-serratus_M_contig855.19944.1|organism=Fucus serratus male|type=CDS|length=4788bp|location=Sequence derived from alignment at F-serratus_M_contig855:43524..60116+ (Fucus serratus male)back to top |