mRNA_F-serratus_M_contig853.19934.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: UPI001C2DCDB9 (2-dehydropantoate 2-reductase n=1 Tax=Marinobacterium ramblicola TaxID=2849041 RepID=UPI001C2DCDB9) HSP 1 Score: 69.7 bits (169), Expect = 3.550e-11 Identity = 47/119 (39.50%), Postives = 72/119 (60.50%), Query Frame = 1
Query: 79 VRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSW-SAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMG 432
+RWH+LGAGAIG L++ RLTRA + L+L++E ++L + ++ +V Q +A W +A+V +P S + IQHLLVTTKA D A+ + R+ +A ++LL NG G
Sbjct: 1 MRWHILGAGAIGCLFAERLTRA-----GIAVTLLLRDE--AQLDRLNQRGCQVRVQRDNA-----WHTAQVDAEPISASGDIQHLLVTTKAYDSIDAINAISPRLTPDAQILLLQNGYG 107
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: UPI001BE7A8D4 (2-dehydropantoate 2-reductase n=4 Tax=Neptunomonas phycophila TaxID=1572645 RepID=UPI001BE7A8D4) HSP 1 Score: 67.8 bits (164), Expect = 1.700e-10 Identity = 48/124 (38.71%), Postives = 71/124 (57.26%), Query Frame = 1
Query: 79 VRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSW-SAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEEL 447
++WH+LGAGAIG LW+ L +A QD R +IL+NE K T ++ A +S S+ AE+ P+ A PI L +TTKA A++ + R++ NA +VLL NGMG +E++
Sbjct: 1 MQWHILGAGAIGCLWAHCLIKAKQDVR-----IILRNEAHLHTYKA---TSGLHYTDMDACKSHSFPQAEL----PNDAAPITRLFITTKAFSTQDAIDSIRHRLVDNAHIVLLQNGMGQHEQV 112
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: A0A430KR26_9GAMM (2-dehydropantoate 2-reductase n=3 Tax=Amphritea TaxID=515417 RepID=A0A430KR26_9GAMM) HSP 1 Score: 65.5 bits (158), Expect = 1.240e-9 Identity = 43/126 (34.13%), Postives = 71/126 (56.35%), Query Frame = 1
Query: 79 VRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSWSAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEELISD 456
+ WH+LGAGAIG LW+A+L +A + +++ E ++ + + + N + +E + SA++ Q +DPI HLL+TTK+ V A + R+ NA V+LL+NGMG ++L D
Sbjct: 16 MHWHILGAGAIGLLWAAKLEKAGHQ----VTLILHTPEKLTQYTEAGGFALTDN----NHTERFTPSAQLADQ----SDPISHLLITTKSFAVTDAFASIQHRLSNNARVLLLHNGMGPQQQLTED 129
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: A0A1H6AXH2_9GAMM (2-dehydropantoate 2-reductase n=1 Tax=Marinobacterium lutimaris TaxID=568106 RepID=A0A1H6AXH2_9GAMM) HSP 1 Score: 64.7 bits (156), Expect = 2.150e-9 Identity = 46/123 (37.40%), Postives = 66/123 (53.66%), Query Frame = 1
Query: 79 VRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSWSAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEEL 447
+ WH+LGAGA+G L++ARL RA D + +L+ E +L + R++ Q E AE+ +PI HLLVTTKA D ALE + R+L A ++LL NG G +E+
Sbjct: 1 MHWHILGAGAVGCLFAARLERAGID----VSLLLRSPERQQQLNLNAN---RISLQDGDRVEEVPMQAELIED----GNPISHLLVTTKAYDSASALESIALRLLTGAQILLLQNGYGHQQEI 112
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: A0A1X7AE46_9GAMM (2-dehydropantoate 2-reductase n=1 Tax=Parendozoicomonas haliclonae TaxID=1960125 RepID=A0A1X7AE46_9GAMM) HSP 1 Score: 64.7 bits (156), Expect = 2.370e-9 Identity = 42/121 (34.71%), Postives = 65/121 (53.72%), Query Frame = 1
Query: 85 WHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSWSAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEEL 447
WH+LGAGAIG LW+A LTR+ + ++ L ++ K +N Q + + + V + + I HLLVTTKA D A+E V +R+ +A +VLL NG+G+ +E+
Sbjct: 24 WHILGAGAIGTLWTALLTRSGLSATLLVRPQRLPDQ---------KQVCDLNIQE----DGETTTLPVTLESTNYTTKISHLLVTTKAGDTLSAIESVKERLTEDACIVLLQNGLGSQQEV 131
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: A0A0K1XGB6_9GAMM (2-dehydropantoate 2-reductase n=4 Tax=Thiopseudomonas alkaliphila TaxID=1697053 RepID=A0A0K1XGB6_9GAMM) HSP 1 Score: 64.3 bits (155), Expect = 3.000e-9 Identity = 40/127 (31.50%), Postives = 69/127 (54.33%), Query Frame = 1
Query: 70 MSSVRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSWSAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEELI 450
+S++ WH+LGAG++G LW+ARL + Q LIL++ + + +V H +S + +AE+ + PI HL+V KA D A++ + R+ NA ++LL NG+G+ + +I
Sbjct: 5 VSTIHWHILGAGSLGCLWAARLAQVKQSVH-----LILRSAV-----RLQAFPGQVQLTTQHTCQSLALTAELAD---TSQTPITHLIVACKAYDALTAIDSIAPRLAENACIILLQNGLGSQQAII 118
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: UPI001662D575 (2-dehydropantoate 2-reductase n=1 Tax=Marinobacterium zhoushanense TaxID=1679163 RepID=UPI001662D575) HSP 1 Score: 63.5 bits (153), Expect = 5.770e-9 Identity = 42/119 (35.29%), Postives = 67/119 (56.30%), Query Frame = 1
Query: 79 VRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSW-SAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMG 432
+RWH+LGAGAIG L++ RLTRA + L+L+++ + K +R+ ++ W +A+V + + + IQHLLVTTKA D A+ + R+ +A ++LL NG G
Sbjct: 1 MRWHILGAGAIGCLYAERLTRA-----GIAVTLLLRDDVQLDRLKQLGGQLRIQRHNA-------WHTAQVDAEMIAASGTIQHLLVTTKAYDSLDAIHAISPRLTPDAQILLLQNGYG 107
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: UPI00129B9DAE (2-dehydropantoate 2-reductase n=1 Tax=Endozoicomonas sp. OPT23 TaxID=2072845 RepID=UPI00129B9DAE) HSP 1 Score: 63.2 bits (152), Expect = 7.600e-9 Identity = 37/129 (28.68%), Postives = 65/129 (50.39%), Query Frame = 1
Query: 85 WHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETW--SEL------GKPSKWTIRVNEQHSHASESSSWSAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEEL 447
WH+LGAG+IG LW+++L + Q P +I++ + + +EL G W ++ H+ + PI+ LL+ TKA D ++A+ V D + N +VL+ NGMG+ +++
Sbjct: 7 WHILGAGSIGCLWASKLLQKQQQ-----PTIIVRQQKYQNTELKLVELDGSTHCWPVKTATSHT------------------LNQPIERLLLCTKAQDAFEAISSVEDHLTENCQIVLMQNGMGSQQQI 112
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: A0A5J6LFW4_9GAMM (2-dehydropantoate 2-reductase n=2 Tax=Nitrincola iocasae TaxID=2614693 RepID=A0A5J6LFW4_9GAMM) HSP 1 Score: 63.2 bits (152), Expect = 8.310e-9 Identity = 43/124 (34.68%), Postives = 64/124 (51.61%), Query Frame = 1
Query: 79 VRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKW-TIRVNEQHSHASESSSWSAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEEL 447
++WH+LGAGA+G L++ RL +A QD +L L KP + + E + + S + QP S + I LL+TTKA D AL V R+ NA ++LL NGMG ++ +
Sbjct: 26 MKWHILGAGAMGNLFATRLLQAGQDVSLIL-----------RLPKPDDYYQLHCLEGKARRTYS------LPIQPASATETISQLLITTKAYDTEMALASVAGRLTPNATILLLQNGMGQHDRI 132
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Match: A0A369WF17_9GAMM (2-dehydropantoate 2-reductase n=2 Tax=Motiliproteus coralliicola TaxID=2283196 RepID=A0A369WF17_9GAMM) HSP 1 Score: 62.8 bits (151), Expect = 1.250e-8 Identity = 44/125 (35.20%), Postives = 64/125 (51.20%), Query Frame = 1
Query: 73 SSVRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSKWTIRVNEQHSHASESSSWSAEVYTQPPSVADPIQHLLVTTKAPDVYQALEDVLDRMLYNAVVVLLNNGMGAYEEL 447
S+ WH+LGAGAIG LW+ L Q + +L+ + + +P W++ Q +E AE+ PI LLVTTK+ D A+E V R+ +AV+VLL NGMG ++L
Sbjct: 47 SASHWHILGAGAIGCLWACHLQLQQQP----VSLLVRSDSKLQQFQQP--WSLSGQSQ----AEGIQLQAELNQS----ESPISRLLVTTKSYDTLAAVEAVRHRLSKDAVIVLLQNGMGQQQQL 157 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig853.19934.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig853.19934.1 >prot_F-serratus_M_contig853.19934.1 ID=prot_F-serratus_M_contig853.19934.1|Name=mRNA_F-serratus_M_contig853.19934.1|organism=Fucus serratus male|type=polypeptide|length=134bp MSSVRWHVLGAGAIGRLWSARLTRAMQDSRSVLPVLILKNETWSELGKPSback to top mRNA from alignment at F-serratus_M_contig853:232408..236121- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig853.19934.1 ID=mRNA_F-serratus_M_contig853.19934.1|Name=mRNA_F-serratus_M_contig853.19934.1|organism=Fucus serratus male|type=mRNA|length=3714bp|location=Sequence derived from alignment at F-serratus_M_contig853:232408..236121- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig853:232408..236121- >mRNA_F-serratus_M_contig853.19934.1 ID=mRNA_F-serratus_M_contig853.19934.1|Name=mRNA_F-serratus_M_contig853.19934.1|organism=Fucus serratus male|type=CDS|length=804bp|location=Sequence derived from alignment at F-serratus_M_contig853:232408..236121- (Fucus serratus male)back to top |