prot_F-serratus_M_contig853.19925.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig853.19925.1
Unique Name	prot_F-serratus_M_contig853.19925.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	279

Homology

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BLAST of mRNA_F-serratus_M_contig853.19925.1 vs. uniprot
Match: D7G920_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G920_ECTSI)

HSP 1 Score: 221 bits (562), Expect = 4.280e-68
Identity = 122/188 (64.89%), Postives = 147/188 (78.19%), Query Frame = 0

Query:   13 SSARRPLATTVSEKIAEGQRLKDEGLRLLKEDKGIKAAVKFKTCFAYTKGLLPRHSQLAQYATLTGQQIIIDSEQQIAVRELELACNEGLATVYFRRARSGDHLKALGYSEKVLVSDPDNLKGLFRAGQLHLRLKNIDKAKICLTRAAKKEPHNVAIRSELRNLSKLAHEYGVD-GVAGASLPGGSES 199
            S+ARRPL TT  +KI EG+RL+DE   LLK DK   AAVKF+T FAYTKGL+P+ S+LA YA +TGQQ +ID +QQ+AVR LEL+CNEGLAT+YFR   SG H KALGYSEKVL+++P++ K LFRAGQL+LRLKNI+ AK CLTRAAK EP NV IR+ELRNL+KLA   GV+ G   A+   G ES
Sbjct:   60 SNARRPLPTTPGDKIVEGERLRDEAQSLLKSDKPKTAAVKFRTVFAYTKGLIPQTSELALYAAVTGQQTVIDQKQQVAVRALELSCNEGLATIYFR---SGHHEKALGYSEKVLLAEPESAKALFRAGQLNLRLKNIEAAKRCLTRAAKHEPQNVNIRTELRNLTKLAQGEGVEAGTESATTEEGKES 244

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BLAST of mRNA_F-serratus_M_contig853.19925.1 vs. uniprot
Match: A0A1V9Y4X3_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y4X3_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 1.070e-6
Identity = 48/166 (28.92%), Postives = 80/166 (48.19%), Query Frame = 0

Query:   20 ATTVSEKIAEGQRLKDEGLRLLKEDKGIKAAVKFKTCFAYTKGLLPRHSQLAQYATLTGQQIIIDSEQQIAVRELELACNEGLATVYFRRARSGDHLKALGYSEKVLVSDPDNLKGLFRAGQLHLRLKNIDKAKICLTRAAKKEPHNVAIRSELRNL---SKLAHE 182
            A +V+ KI +   LK +G  L K  +  KA  K+ + F Y  GL      ++ Y+      +   +E+ + ++ L+       A  + +    G   KA+   +KVL ++P+++K LFR GQ +        AK  L +A   EP N A+R+EL+ +   SKL  E
Sbjct:   19 ALSVAGKIEQANLLKAQGNTLFKGGEYKKAIRKYSSIFLYVNGLSVAGDGMSTYSAGNAS-MSASAEEGVEIQALKTVAFTNSAMAHLKL---GAFDKAIEACDKVLATEPEHVKALFRKGQAYAGKGKYSLAKEVLKKAMALEPKNAAVRNELKRVIDESKLHPE 180

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BLAST of mRNA_F-serratus_M_contig853.19925.1 vs. uniprot
Match: UPI001C4BF54E (tetratricopeptide repeat protein 9C n=1 Tax=Sceloporus undulatus TaxID=8520 RepID=UPI001C4BF54E)

HSP 1 Score: 55.1 bits (131), Expect = 1.500e-5
Identity = 44/153 (28.76%), Postives = 70/153 (45.75%), Query Frame = 0

Query:   27 IAEGQRLKDEGLRLLKEDKGIKAAVKFKTCFAYTKGL-----LPRHSQLAQYATLTGQQIIIDSEQQIAVRELELACNEGLATVYFRRARSGDHLKALGYSEKVLVSDPDNLKGLFRAGQLHLRLKNIDKAKICLTRAAKKEPHNVAIRSELR 174
            +   Q  K+EG R  KE +   A  ++       KGL      P     A+ A++T       SEQ+  +  ++  C   LA    +     ++ +   YS KVL   P+N+KGL+RAG     LK+ DKA+  L  A  K+P +  ++  L+
Sbjct:   23 LQRAQAFKEEGNRCYKEGRFRDAVSRYHWALLQVKGLDPSVPFPLQEFGAERASMT-------SEQERVLHNIQSDCYNNLAACLLQMQHV-NYERVKEYSLKVLERQPENVKGLYRAGVAFYHLKDYDKARHYLLAATSKQPKDANVKRYLQ 167

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig853.19925.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig853.19925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
D7G920_ECTSI	4.280e-68	64.89	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A1V9Y4X3_9STRA	1.070e-6	28.92	Uncharacterized protein n=1 Tax=Achlya hypogyna Ta...	[more]
UPI001C4BF54E	1.500e-5	28.76	tetratricopeptide repeat protein 9C n=1 Tax=Scelop...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10		coord: 19..185 e-value: 4.1E-20 score: 74.0
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 29..182
IPR031208	AH receptor-interacting protein	PANTHER	PTHR11242:SF3	AH RECEPTOR-INTERACTING PROTEIN	coord: 11..181
IPR039663	AIP/AIPL1	PANTHER	PTHR11242	ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED	coord: 11..181
IPR013026	Tetratricopeptide repeat-containing domain	PROSITE	PS50293	TPR_REGION	coord: 99..166 score: 9.597

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig853	contig	F-serratus_M_contig853:91228..96006 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig853.19925.1	mRNA_F-serratus_M_contig853.19925.1	Fucus serratus male	mRNA	F-serratus_M_contig853 90963..96145 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig853.19925.1 ID=prot_F-serratus_M_contig853.19925.1|Name=mRNA_F-serratus_M_contig853.19925.1|organism=Fucus serratus male|type=polypeptide|length=279bp
MATSAITPVSPVSSARRPLATTVSEKIAEGQRLKDEGLRLLKEDKGIKAA
VKFKTCFAYTKGLLPRHSQLAQYATLTGQQIIIDSEQQIAVRELELACNE
GLATVYFRRARSGDHLKALGYSEKVLVSDPDNLKGLFRAGQLHLRLKNID
KAKICLTRAAKKEPHNVAIRSELRNLSKLAHEYGVDGVAGASLPGGSESN
VFGSQSEIPRGTSAKPDAVTGSMSRDGHASSVRREHETSDGAGSGSRHGT
GGGGNDSIGDEDDGGGKRRRDDGGVGKP*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011990	TPR-like_helical_dom_sf
IPR031208	AIP
IPR039663	AIP/AIPL1
IPR013026	TPR-contain_dom