prot_F-serratus_M_contig85.19901.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig85.19901.1
Unique Nameprot_F-serratus_M_contig85.19901.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length333
Homology
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BLAST of mRNA_F-serratus_M_contig85.19901.1 vs. uniprot
Match: A0A6H5KIX7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KIX7_9PHAE)

HSP 1 Score: 195 bits (496), Expect = 5.030e-56
Identity = 115/214 (53.74%), Postives = 134/214 (62.62%), Query Frame = 0 
Query:    1 MRAVGAKRPREPFASSKHAPVQWTGRVPKPAMNKDSWVDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTK--CARAPSATLP--------VTEEQKLRSHSRHPMGDSATRASHAAPALGESIYSGLRLGASLPA-SHGPPS------FAVGDLSGETTGVDFTDCSD-APPSHHMLVRDESGGSWWSLEEQ 196
            +RAVGAKRPR   A+++   + W GRVPKPAM+ DS+VDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKT     R P+ T P            ++ R    +      T+    A   G +        +  PA +H  P          G+LSGETT VD TDCSD   P H +L RDESG SWWSL++Q
Sbjct:    4 VRAVGAKRPRGYVAAAEKPTLPWAGRVPKPAMDADSFVDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTGNGTRRQPAGTSPPDCAGSSGADARKQRRQFMEYQQRALRTQQQQHAAVGGLARAPASSASSRYPAVAHSRPLAPHASVLTTGELSGETTCVDQTDCSDNGLPPHRVLSRDESGSSWWSLDDQ 217
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BLAST of mRNA_F-serratus_M_contig85.19901.1 vs. uniprot
Match: A0A6H5K1B7_9PHAE (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1B7_9PHAE)

HSP 1 Score: 60.1 bits (144), Expect = 2.950e-6
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:   35 DSWVDYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRS 87
            + W     G LRKSCD+C SSK +C G  PC RC +R+  C +++R++CGP++
Sbjct:   13 EGWRRGSRGPLRKSCDTCTSSKTKCQGSIPCDRCKKRRIECKFSKRRRCGPKA 65
[Close]
BLAST of mRNA_F-serratus_M_contig85.19901.1 vs. uniprot
Match: A0A2I2G358_9EURO (C6 zinc finger domain protein n=1 Tax=Aspergillus steynii IBT 23096 TaxID=1392250 RepID=A0A2I2G358_9EURO)

HSP 1 Score: 56.6 bits (135), Expect = 3.650e-5
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 0 
Query:   13 FASSKHAPVQWTGRVPKPAMNKDSWV--DYGSGFLRKSCDSCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKT 91
            F+SS    V  T  V +P M + + V   +    ++ +C SC +S+ RCDGQDPC+ CL +KK C Y   K+ GPR  +++
Sbjct:    6 FSSSYDNGVTTTTTVTQPKMARTTVVRKKFAKPPVKVACLSCRASRTRCDGQDPCSNCLGKKKKCSYMPSKRGGPRKKKRS 86
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig85.19901.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KIX7_9PHAE5.030e-5653.74Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
A0A6H5K1B7_9PHAE2.950e-645.28Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
A0A2I2G358_9EURO3.650e-538.27C6 zinc finger domain protein n=1 Tax=Aspergillus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 43..86
e-value: 0.0022
score: 27.3
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 47..82
e-value: 1.9E-5
score: 24.6
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 48..77
score: 9.743
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 44..101
e-value: 4.5E-7
score: 31.7
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 45..82
NoneNo IPR availablePANTHERPTHR31069:SF16coord: 46..101
NoneNo IPR availablePANTHERPTHR31069FAMILY NOT NAMEDcoord: 46..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig85contigF-serratus_M_contig85:769532..772943 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig85.19901.1mRNA_F-serratus_M_contig85.19901.1Fucus serratus malemRNAF-serratus_M_contig85 769218..774940 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig85.19901.1 ID=prot_F-serratus_M_contig85.19901.1|Name=mRNA_F-serratus_M_contig85.19901.1|organism=Fucus serratus male|type=polypeptide|length=333bp
MRAVGAKRPREPFASSKHAPVQWTGRVPKPAMNKDSWVDYGSGFLRKSCD
SCVSSKRRCDGQDPCTRCLRRKKPCHYTERKKCGPRSGQKTKCARAPSAT
LPVTEEQKLRSHSRHPMGDSATRASHAAPALGESIYSGLRLGASLPASHG
PPSFAVGDLSGETTGVDFTDCSDAPPSHHMLVRDESGGSWWSLEEQVKAP
ESSSRPAWAQEAGYGRSGTAGHPNHDVDHVDDGHLRKRCRYESGGRWEDA
HEATGGGGSVSGASGGSGCETSEDDVSEEQAEEEVAALLIHLWRSEPFVE
DLSGEPLKGARPSPAVVRRTAHASRHVDFNKR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf