prot_F-serratus_M_contig85.19896.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig85.19896.1
Unique Nameprot_F-serratus_M_contig85.19896.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length729
Homology
BLAST of mRNA_F-serratus_M_contig85.19896.1 vs. uniprot
Match: D7FRX1_ECTSI (SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX1_ECTSI)

HSP 1 Score: 439 bits (1130), Expect = 1.980e-141
Identity = 418/723 (57.81%), Postives = 477/723 (65.98%), Query Frame = 0
Query:    1 MPLTMRSIPHALNLGAPEIYGQGTSGEGSHGTQVLEDVNMASMVGTLAQLGALATYAQDIFDGLFETADTLASKVSAASARCSRLQKALPEAERQTAEAILTGSVVDDNAAVEAIKAERQLAHQAESEAAAKVFHPEAMPKGVVERYRSPEVAPLPNLHLIDAVISEEDKALLRKDGLDSCALRYSNPQFFYQEWYRLEMERQEKAMREKXXXXXXXXXXXXXXXXXXXXXXXXXXXEGARNQRPARKTISDWRGKLSIGTAGLGKGSGMGGTRGGNARSAAGDVSFLVGNEKVVIEKREDFGDKFYRQEEDFADTGYQITSTDASNET-SALTEMRQLGALTAEDFEGRPAASTADNRRLFRPPVVRGAQSLSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARPXALPHXXXXSASMNLEGNAARPXXXXXXXXXXFAVQGAPAPSLPXXXXXXXXXXXXXXXXXXXXXXSHSRIPSFQEPVVS-FLQSTDGEIDAAPTRPSFELWGMDQPPPXXXXXXPAPPEEV-TFEPPLMSPEAPSAFPPVKVSPTGWEPPPXXXXMPSRXXXXXXXXSATATVIPQASQ---QPLPXXXXXXLP--GSVLPPPXXXXXXAPGGPLDGRDALLTGITEGKKLKKVVRPAPDTGADGGGG-NELLEAIRRGXXXXXXQQPPAAAPDTANPPLGGNPGINEILARRKFLEAES 714
            MPLTMR IPHALNLG PEIYGQG SG+G+ GTQVLEDVNMASMVGTLAQLG LATYAQD+FDGLF+TAD L+ K+SAAS RCS L +ALPEAE++TAEAI +G+ +DDNAAVEAIKAERQ A QAESEAA+KVFHPEAMP+ +VERY SPEVA +P+LHLIDAV+S E+K+LL KDGLDSCALRYSNPQFFYQEWYRLE+ERQEK++REKXXXXXXXXXXXXXXXXXXXX       E AR  RPARK++ DWRGKL++G AGLG GS   G   G +   AGDVS LVG +KVV++KRE + DKFYR+EE+ ADT YQI  +DA     S   +++QLGALT EDF  +  +++   R LF+PP  RG      XXXXXXXXXXXXXXXXXXXXXXX    XXXXXXXXXXXXXXXXX   X    XXXX             XXXXXXXX X                     XXXXXXXXXXX   ++  PS+QEP+V+  L+S     +    RPS+E WG+             PPE    FE       AP+  PP                         XXX A    + +ASQ    PLPXXXXXX+P  G      XXXXXX   G    R  LL  IT GKKLKKV RPAP          NE        XXXXXX    A A +T+NP  GGNPGINEILARRK+LEAES
Sbjct:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPGTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADDLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXXAGVEKDEERARAPRPARKSLGDWRGKLAVGAAGLGIGSXXXGVSRGASTRGAGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDAGAAVPSGGQQLQQLGALTPEDFNRKLGSASEGGRLLFKPPSARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAXXXXX-----------------XXXXXXXXXXXTQPYAPRPSYQEPIVTPTLESEAMMEETHARRPSYESWGI-------------PPEPAQNFE----HGGAPAVAPPAXXX---------------------XXXXAQLPPVQEASQFGQPPLPXXXXXXMPSMGHAXXXXXXXXXXXXSGGASMRGDLLASITNGKKLKKVERPAPVAXXXXXXXXNEXXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAES 668          
BLAST of mRNA_F-serratus_M_contig85.19896.1 vs. uniprot
Match: A0A7R9U748_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U748_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 1.970e-13
Identity = 65/203 (32.02%), Postives = 102/203 (50.25%), Query Frame = 0
Query:    1 MPLTMRSIPHALNLGAPEIYGQGTSGEGSHGTQVLEDVNMASMVGTLAQLGALATYAQDIFDGLFETADTLASKVSAASARCSRLQKALPEAERQTAEAILTGSVVDDNAAVEAIKAERQLAHQAESEAAAKVFHPEAMPKGVVERYRSPEVAPLPNLHLIDAVISEEDKALLRKDGLDSCALRYSNPQFFYQEWYRLEMERQ 203
            MP+  R I H L    P++Y      E S    VL++++MAS+ G +AQLG LA+YA ++F  L + A+  + ++ AAS +   L   L + +          SVV  N          ++  +   E  + +F  +AMP  +  RY +  V   P L  +D V+  E K   ++ G   CA R+SNP+FF +EW++ E ERQ
Sbjct:    1 MPIVKRGIAHPLAYADPQLY------ENSPPELVLQNIDMASLSGAMAQLGNLASYATEMFRELMDIANEQSKRLVAASEKTEGLLLKLRDVD----------SVVSTNTKPLGAAGGVEVTVREPQEVDSGLFDKDAMPMAIRHRYENEVVQRAPPLQRLDTVVLPETK---KEWG--PCADRFSNPRFFREEWFKAEKERQ 182          
BLAST of mRNA_F-serratus_M_contig85.19896.1 vs. uniprot
Match: A0A7S3H440_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H440_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 7.230e-9
Identity = 61/210 (29.05%), Postives = 98/210 (46.67%), Query Frame = 0
Query:    1 MPLTMRSIPHALNLGAPEIYGQGTSGEGSHGTQVLEDVNMASMVGTLAQLGALATYAQDIFDGLFETADTLASKVSAASARCSRLQKALPEAERQTAEAILTGSVVDDNAAVEAIKAERQLAHQAESEAAAKVFHPEAMPKGVVERYRSPEVAPLPNLHLIDAVISEEDKALLRKDGLDSCALRYSNPQFFYQEWYRLEMERQEKAMREK 210
            MPLT R I    +    +I       E SHG ++L D   A  VG L QL  LA +A ++F GL   +  L  ++ +  +R ++LQ ALP+        ++T S  D +   + I+  RQ+    +S+    +    ++   ++ R  S +V P    H +DA      K L       + A RYSNP FF  +W  +++ R ++  REK
Sbjct:    1 MPLTQRLISRDSSASYSKIM------ENSHGEELLTDKTFAETVGCLRQLSDLALFANEVFSGLLSLSVNLNERIESLHSRSAKLQVALPKL-------VVTNSAFDIHG--DEIQHHRQMLQNPQSQ---HLVDRSSISNALLLRCCSNQVKPRIQFHTLDAYA----KHLAIGSKSTTIAQRYSNPDFFLNQWCTVQVARMKQLEREK 188          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig85.19896.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRX1_ECTSI1.980e-14157.81SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7R9U748_9STRA1.970e-1332.02Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S3H440_9STRA7.230e-929.05Hypothetical protein (Fragment) n=1 Tax=Spumella e... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95
NoneNo IPR availableCOILSCoilCoilcoord: 196..227
NoneNo IPR availableGENE3D1.20.5.340coord: 1..93
e-value: 6.1E-7
score: 31.6
NoneNo IPR availableGENE3D1.20.58.1570coord: 108..252
e-value: 1.3E-7
score: 33.5
coord: 660..727
e-value: 4.1E-6
score: 28.6
NoneNo IPR availablePANTHERPTHR12902:SF1MIP02973Pcoord: 1..222
IPR003124WH2 domainSMARTSM00246wh2_8coord: 632..649
e-value: 0.031
score: 23.4
coord: 662..679
e-value: 0.0031
score: 26.7
IPR003124WH2 domainPFAMPF02205WH2coord: 659..681
e-value: 1.8E-4
score: 21.3
coord: 631..650
e-value: 5.4E-4
score: 19.7
IPR003124WH2 domainPROSITEPS51082WH2coord: 632..649
score: 9.16
IPR003124WH2 domainPROSITEPS51082WH2coord: 662..679
score: 9.695
IPR028288SCAR/WAVE familyPANTHERPTHR12902WASP-1coord: 1..222

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig85contigF-serratus_M_contig85:604748..619299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig85.19896.1mRNA_F-serratus_M_contig85.19896.1Fucus serratus malemRNAF-serratus_M_contig85 604562..620354 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig85.19896.1 ID=prot_F-serratus_M_contig85.19896.1|Name=mRNA_F-serratus_M_contig85.19896.1|organism=Fucus serratus male|type=polypeptide|length=729bp
MPLTMRSIPHALNLGAPEIYGQGTSGEGSHGTQVLEDVNMASMVGTLAQL
GALATYAQDIFDGLFETADTLASKVSAASARCSRLQKALPEAERQTAEAI
LTGSVVDDNAAVEAIKAERQLAHQAESEAAAKVFHPEAMPKGVVERYRSP
EVAPLPNLHLIDAVISEEDKALLRKDGLDSCALRYSNPQFFYQEWYRLEM
ERQEKAMREKKQKKEERRRRKAAAKSAAARAGGKEDEEGARNQRPARKTI
SDWRGKLSIGTAGLGKGSGMGGTRGGNARSAAGDVSFLVGNEKVVIEKRE
DFGDKFYRQEEDFADTGYQITSTDASNETSALTEMRQLGALTAEDFEGRP
AASTADNRRLFRPPVVRGAQSLSTTTSTPPAIPRPSPPQQRPPPPQVPAA
QPGTATSAAPPIPPPPPSARPPALPHPPPPSASMNLEGNAARPAAPPVPP
APPFAVQGAPAPSLPPPPPSARPPPPRAAPPPPPPPPSHSRIPSFQEPVV
SFLQSTDGEIDAAPTRPSFELWGMDQPPPPPLPPLPAPPEEVTFEPPLMS
PEAPSAFPPVKVSPTGWEPPPPPPPMPSRPPVPPPLPSATATVIPQASQQ
PLPPPLPPPLPGSVLPPPPPPLPPAPGGPLDGRDALLTGITEGKKLKKVV
RPAPDTGADGGGGNELLEAIRRGAELKKVQQPPAAAPDTANPPLGGNPGI
NEILARRKFLEAESEDSDSEEESDWEEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003124WH2_dom
IPR028288SCAR/WAVE_fam