mRNA_F-serratus_M_contig101.198.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: D7FN20_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN20_ECTSI) HSP 1 Score: 321 bits (822), Expect = 3.890e-96 Identity = 185/349 (53.01%), Postives = 220/349 (63.04%), Query Frame = 1 Query: 1 SSGRDGLVRVFDASSAASLDGPESPGFRLGGR-------------------------------------EGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELK----AAGGGQARACTDAA--GTTIAS 918 S+ RD LVRVFDAS + + S G +GGR G+ + T + G +E V AA A PL+ TL HTGSV+AV+FSKDGKRLI+AGGD LVLN VRGP + R +AV VPQGTIYGLDVDPTN Y++T GQDKRL+IW+ SGKHVRAY+VE P T + SA + +V G +KG+ GGELFK+DLDPTGMYAAACSFDKWIRLFDFYSG+CLA V+GHSELATGVRFTPDGRRLV+ GGDGVM VWRLS +L ++MRDRM EL+ AGGG R D G+T++S Sbjct: 823 SASRDRLVRVFDASRSPFV---YSAGAGVGGRGXXXXXXXSEAATTAARGSAAACAENVVAHRSSRGKEAGQPGARENAANTDATAAPGGAAETGVGAASEAAGLPLLTTLDSHTGSVSAVKFSKDGKRLITAGGDKTLVLNSVRGPHVHRLRAVKVPQGTIYGLDVDPTNKYIITAGQDKRLNIWSTISGKHVRAYQVE-PLTKTPNPSPSAESTAGGQGGASVGEGPRDKGDTGGELFKVDLDPTGMYAAACSFDKWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGGDGVMFVWRLSSELHESMRDRMCELRPGGETAGGGSIRGTRDGGRGGSTLSS 1167
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A6H5L4C9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4C9_9PHAE) HSP 1 Score: 273 bits (697), Expect = 2.170e-79 Identity = 162/308 (52.60%), Postives = 188/308 (61.04%), Query Frame = 1 Query: 1 SSGRDGLVRVFDASSAASLDGPESPGFRLGG--------------------------------REGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPL------SLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDK--------WIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGD 786 S+ RD LVRVFDAS + S+ G GG + G++ + T + G +E V AA A PL+ TL HTG V AV+FSKDGKRLI+AGGD +LVLN VRGP + R +AV V QGTIYGLDVDPTN Y+VT GQDKRL+IW+ SGKHVRAYKVE PL SL A+S A R+ G G +KG+ GGELFK+DLDPTGMYAAACSFDK WIRLFDFYSG+CLA V+GHSELATGVRFTPDGRRLV+ G D Sbjct: 210 SASRDRLVRVFDASRSPSVCSAGVGGRGAGGXXXASEAATPAARGSAAACADNGVAHRSSRGKKAGQLGARENATNTDATAAPGVAAETGVGAASEAAGLPLLLTLDSHTGPVGAVKFSKDGKRLITAGGDKMLVLNSVRGPHVHRLRAVKVTQGTIYGLDVDPTNKYIVTAGQDKRLNIWSTISGKHVRAYKVE----PLMKTRNPSLLAESTAGGQGRTSVGG---GPRDKGDTGGELFKVDLDPTGMYAAACSFDKVCVRCSIVWIRLFDFYSGECLAKVAGHSELATGVRFTPDGRRLVTTGDD 510
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S2AWM8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AWM8_9STRA) HSP 1 Score: 171 bits (433), Expect = 7.470e-49 Identity = 95/235 (40.43%), Postives = 129/235 (54.89%), Query Frame = 1 Query: 235 GSVTAVRFSKDGKRLISAGGDNVLVLNKV--------------------------RGP---DIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDE 852 GSVTA R SK+G +L + GGD L L +V R P D + A PQ +Y + D T YVVTVG D+ LHI++ A+GKHVR Y + P G + GGG GEL+K+ + P GMYAA CSFD+W+RLFD +SG+CLA V GH+EL TG+RF+ DG+RL+S+GGDG + VW+L+ + Q + +R++E Sbjct: 1 GSVTAARMSKNGSKLFTCGGDLHLNLCRVASNAEVTAMCDMTSDEGQREVVTRYLRAPLIRDSSQTSAAGDPQQMVYDMTSDGTGKYVVTVGSDRHLHIFSAANGKHVRKYAADAPNNTQDKGGE----------------GGG------GELYKVAVCPAGMYAATCSFDRWVRLFDLFSGRCLAQVGGHAELITGIRFSSDGQRLLSVGGDGCIFVWKLASQITQAIGERLEE 213
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S2S3R8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S3R8_9STRA) HSP 1 Score: 184 bits (468), Expect = 8.430e-49 Identity = 96/235 (40.85%), Postives = 140/235 (59.57%), Query Frame = 1 Query: 202 FPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPD--------------IQRFKAVSVPQGTIYGLDVDPTNNYVVTVG-QDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKA 861 + L+++ HT +V++VRFS DGKRL S G D +L L++V P + ++++ + QG Y ++ D T Y++T G +DK LHI++ SGKHVR Y + P A G G G EL+K+ + P GMY A CSFDKWIRLFDFYSG C+A V+GH+EL TG++FTPDG+RL+SIGGDG + VW+L+ + + +++R E++A Sbjct: 163 YRLLESQEYHTAAVSSVRFSLDGKRLFSCGTDKILTLSRVLAPGPENTTPSEGSPMNLVHLYRSIPLNQGMAYDMNTDRTGKYIITTGGEDKLLHIYSATSGKHVRCYSADLEP--------------------AADAGKGASGSS--ELYKLAICPGGMYTATCSFDKWIRLFDFYSGACIAQVAGHAELVTGLKFTPDGKRLISIGGDGCIFVWKLNSAIARGIQEREKEIEA 375
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S1CEL4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CEL4_9STRA) HSP 1 Score: 181 bits (459), Expect = 6.570e-48 Identity = 110/292 (37.67%), Postives = 153/292 (52.40%), Query Frame = 1 Query: 10 RDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVR-------GPDIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAA 864 R+G VRV+D + L + EV + G+R +R V R + L +L HT +VTAV FS D RL+S GD LV N+V G + R KA + P GTIY + VD TN +VT GQDKRL+IWN+AS K VR+Y A PG EL ++ +DP G+ A CSFDK IR++DFY G+ L+ V+ HSE+ TG+ FT D RR++S+GGD ++VWRL+P+L MR+R+ E++++ Sbjct: 540 REGNVRVYDLRTMGLT-------HMLPAHDAEVMSVCFAPRSGALVASGSR-DRMVHVFDARRSYALGASLDAHTSAVTAVLFSNDDSRLLSCAGDKTLVFNRVNLDGDAAAGELVTRIKAATAPNGTIYDMHVDSTNRSLVTAGQDKRLNIWNMASCKPVRSY--------------------------AADPGCQ-------ELNRVVMDPAGILAVTCSFDKAIRMYDFYEGRRLSRVTAHSEMVTGLAFTHDCRRMISVGGDACIMVWRLAPELTSAMRERLSEIQSS 790
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2R5GFS1_9STRA (WD repeat-containing protein 62 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFS1_9STRA) HSP 1 Score: 178 bits (451), Expect = 1.620e-46 Identity = 99/217 (45.62%), Postives = 131/217 (60.37%), Query Frame = 1 Query: 211 VKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPD--IQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDEL 855 V+TL H+ VTAVRFS DG+RL+S GGD +VL+ V G D R K+V+VP GTI+ +DVD +N Y T GQDK+++IW++++GK +R+YK EG P GEL K+ LDP GMY A S DK IRL DFYSG CLA +GH E TG+ FT D +RLVS+ DG + VWRL+P++ +++R EL Sbjct: 553 VQTLKDHSAIVTAVRFSVDGERLLSTGGDKTIVLS-VLGLDGRYARQKSVNVPYGTIHDVDVDASNKYFCTSGQDKKINIWSLSNGKSIRSYKPEGDP---------------------------------GELTKVLLDPAGMYCATGSHDKAIRLLDFYSGDCLAKSAGHGEPITGLAFTSDCKRLVSVSRDGCVFVWRLAPEIHAAIKERKREL 735
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S2CJK0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CJK0_9STRA) HSP 1 Score: 160 bits (405), Expect = 2.700e-45 Identity = 84/168 (50.00%), Postives = 105/168 (62.50%), Query Frame = 1 Query: 352 VSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDEL 855 V + QG +Y + D T YVVTVG D++LHI ASGKHVR Y + PP+ + G T SKS EL+K+ L P GMY A CSFDKWIRLFDFYSG+CLA V+GH+EL TG+RF+ DG RL+S+GGDG + VW+L L M +R+ EL Sbjct: 1 VPLNQGMVYDMASDVTGKYVVTVGADRQLHIHAAASGKHVRCYTGDPPPSLVGGGGPGGETV---SKS---------------ELYKMALCPAGMYTATCSFDKWIRLFDFYSGRCLAQVAGHAELVTGLRFSADGTRLLSVGGDGCIFVWKLGGGLVSAMAERLQEL 150
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S1UAY3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UAY3_9STRA) HSP 1 Score: 164 bits (414), Expect = 1.030e-41 Identity = 91/259 (35.14%), Postives = 145/259 (55.98%), Query Frame = 1 Query: 100 GEVERTNTVQDGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDI-----QRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKA 861 G +R + + T + G + + GV R LV + H+G+VT+V+FS+D +RL+S G D+ L ++ + ++K+ S +G+++G+ D + Y VTVGQDK + I+N+ +G+ VR YK + AQ AA G RG E ++ +DP+G+Y A CS+D+W+R+ DFYSG+ +A +GH E+ T FTPDG+ LV+ G DGV+ W+L P ++ + DR+ ELKA Sbjct: 407 GSRDRLVHIFEDAATAAGGEKPQPEEDGGGVPR---LVCSTAYHSGAVTSVQFSRDARRLLSVGTDSALTCMELCYAEEGAVKPSKYKSASHAKGSLHGVATDASGKYCVTVGQDKVMRIYNVKNGRFVRNYKPQ---------AQGAA---------------GGSAPRG-ETLRVSVDPSGLYVATCSYDRWVRITDFYSGRVVARAAGHGEVVTAAAFTPDGQNLVTAGADGVIFSWKLPPHVRTAVSDRLQELKA 637
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A2P6NS99_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NS99_9EUKA) HSP 1 Score: 155 bits (392), Expect = 1.150e-38 Identity = 98/292 (33.56%), Postives = 149/292 (51.03%), Query Frame = 1 Query: 10 RDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQ-----DGPCTRSVGTRSERSVAAAGVARPFPLVKTLGCHTGSVTAVRFSKDGKRLISAGGDNVLVLNKVRGPDIQRFKAVS---VPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDG--RRLVSIGGDGVMLVWRLSPDLQQTMRDRMDEL 855 R G VRV D S + + E+ + EV Q GP + G+R + + + F LV +L H+ S+T+++F+ G +L+S G D ++ +V+ I FK V GT++ +D+DPTN +VVT GQ+K+L+++ IA+GK R+YK EG GE K+ LDP G+YAA S DK IRL+DF+SG + V GHSE+ TG+ F+ D RL+S+ GD + +W+LSP+L M +R+ E+ Sbjct: 506 RSGNVRVHDMHSLSEISYSEA-------HDEEVLSLAFSQPKEDGSGPLLLASGSR-DHLIHVFDINNRFQLVHSLADHSSSITSIQFANQGTKLLSCGADRSILFREVQTNPIG-FKLAHTSMVHYGTVFDMDIDPTNRFVVTAGQEKKLNVYTIATGKSSRSYKTEG---------------------------------ECGETLKVKLDPAGLYAATSSADKNIRLYDFFSGDFMTKVCGHSEVVTGLAFSRDKDCSRLLSVSGDSCIFIWKLSPELSANMEERLSEI 755
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Match: A0A7S3CYC9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3CYC9_9EUKA) HSP 1 Score: 144 bits (364), Expect = 1.460e-37 Identity = 80/213 (37.56%), Postives = 109/213 (51.17%), Query Frame = 1 Query: 235 GSVTAVRFSKDGKRLISAGGDNVLVLNKVRGP--DIQRFKAVSVPQGTIYGLDVDPTNNYVVTVGQDKRLHIWNIASGKHVRAYKVEGPPTPLSLGAQSAATAPVRSKSGAVRPGGGNKGERGGELFKIDLDPTGMYAAACSFDKWIRLFDFYSGKCLATVSGHSELATGVRFTPDGRRLVSIGGDGVMLVWRLSPDLQQTMRDRMDELKAAG 867 G V + D +L+S D +V ++ P ++ R+ GTIY + +D TN Y VT GQDK++ IW + +GK R YK++ GE KI +DP G+ A DK++RL DF SG+CL V GHSEL TG++FTPD RRL+S+ GDG M VW+L DL + M DR+ EL AG Sbjct: 11 GGPFVVGSNMDDVKLLSCSADKSIVFRSIQEPSGEVGRYSQCVSQYGTIYDMSLDVTNKYAVTGGQDKKIKIWKVENGKSNRIYKLDADT---------------------------------GEPIKIQMDPAGVTFATSGSDKFVRLHDFLSGECLVRVGGHSELITGLKFTPDCRRLISVAGDGCMFVWKLRSDLTRAMLDRLAELFPAG 190 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig101.198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig101.198.1 >prot_F-serratus_M_contig101.198.1 ID=prot_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=polypeptide|length=309bp SSGRDGLVRVFDASSAASLDGPESPGFRLGGREGEVERTNTVQDGPCTRSback to top mRNA from alignment at F-serratus_M_contig101:217333..220246- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=mRNA|length=2914bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig101:217333..220246- >mRNA_F-serratus_M_contig101.198.1 ID=mRNA_F-serratus_M_contig101.198.1|Name=mRNA_F-serratus_M_contig101.198.1|organism=Fucus serratus male|type=CDS|length=1854bp|location=Sequence derived from alignment at F-serratus_M_contig101:217333..220246- (Fucus serratus male)back to top |