mRNA_F-serratus_M_contig85.19895.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE) HSP 1 Score: 546 bits (1407), Expect = 7.280e-168 Identity = 347/863 (40.21%), Postives = 485/863 (56.20%), Query Frame = 1
Query: 2605 NPEYNGVAERGLAMIESAALAARIQASELFPGFDIPEKPSLWAEAMSWACDAYNRTATVANPGNRSPHEMFYGKIPQNSPIPFLKPGYCKYKRMNKMDPKARECFYLGPARNHPRESKRVFVHTGKVIVTRNVTWAHVGSGRSLITRSKPSVVGEGDESGQDREASASED---------------GESVSEGTRSEIVTPEAEAATPI-------TSGRAPTSEARSSQCGVST------------------------DPEGMTPGESLADASADASSSLGPDKRYAALGTGEARRLAEYI--LGPLRSSLR-------GRTRGEERRLTTDAQGLVSLEDELAIAQAVEEEAMLEEAYMAD--AGVSIEMPTGKIQDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLT--VFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG 5016
+P+YNGVAERGL +IE AA+AARIQA LF +P+ LWAEAM WAC+A N TA ANP + SP+EM+YG+ P PFLKP YC+++R K+ PK CFY+GP+R+HPR+ RV G + TR+VTW + S + S P V E E G+D + + + ++V G R E V E+ A + +S P+S A +S V++ DP G ES+ A A R ++ L ++ R GRTR + R + Q + L L A E L M++ AG E+P +QD+ P + E RS + K +E + E+EGL+ G FT ++P ++ ++WV +K DE G VK K+RLVAKGF Q GVDY ET SPT AA +++ A+A + L + H D+ QAFVQ+ L E+FM+LP GCG ++GKV+RL K YGLKQA R ++ LV+ L ++IG EQ ++PCV R M+ DEV MV +HVDDI+ +G KS + A L + P KN GE++ + GCAFVRD E+G +EM+Q +Y+ +++ ++ + TS+IP SP D +DE G+ F R +VGSLMW++ TRPDI+NA+RA ARHSH P HWKA Q++ Y+ T + LKF + + + V+ DAD+A+ +NDRRSVSG V++ + W S TQKCV+ +T EAEY+A+ D KEALF+ +L FL+P ++DV DNEGA A+A NP S+SRSKHIDV+ HF+R L G
Sbjct: 76 SPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPYPFLKPAYCRWQRPTKLLPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEVLQSQLPPLQPSLPIEVAE--EGGEDSDDNVETEVWPLVGRGVAHTLLKRDAVPSGARVEEV--ESVGAGSVGPSFSVPSSPAEPSSLANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPAARRPRHVAELADFNTASRENDEVREGRTRAQTR--AVNQQSVPGLVASLGPISATE----LVYTLMSEQRAGDETELPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLA--AKVPISCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSEL-KRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPF---REVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEG 922
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE) HSP 1 Score: 548 bits (1413), Expect = 2.990e-165 Identity = 348/863 (40.32%), Postives = 486/863 (56.32%), Query Frame = 1
Query: 2605 NPEYNGVAERGLAMIESAALAARIQASELFPGFDIPEKPSLWAEAMSWACDAYNRTATVANPGNRSPHEMFYGKIPQNSPIPFLKPGYCKYKRMNKMDPKARECFYLGPARNHPRESKRVFVHTGKVIVTRNVTWAHVGSGRSLITRSKPSVVGEGDESGQDREASASED---------------GESVSEGTRSEIVTPEAEAATPI-------TSGRAPTSEARSSQCGVST------------------------DPEGMTPGESLADASADASSSLGPDKRYAALGTGEARRLAEYI--LGPLRSSLR-------GRTRGEERRLTTDAQGLVSLEDELAIAQAVEEEAMLEEAYMAD--AGVSIEMPTGKIQDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLT--VFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG 5016
+P+YNGVAERGL +IE AA+AARIQA LF +P+ LWAEAM WAC+A N TA ANP + SP+EM+YG+ P PFLKP YC+++R K+ PK CFY+GP+R+HPR+ RV G + TR+VTW + S + S P V E E G+D + + + ++V G R E V E+ A + +S P+S A +S V++ DP G ES+ A A R ++ L ++ R GRTR + R + Q + L L A E L M++ AG E+P +QD+ P + E RS + K +E + E+EGL+ G FT ++P G ++ ++WV +K DE G VK K+RLVAKGF Q GVDY ET SPT AA +++ A+A + L + H D+ QAFVQ+ L E+FM+LP GCG ++GKV+RL K YGLKQA R ++ LV+ L ++IG EQ ++PCV R M+ DEV MV +HVDDI+ +G KS + A L + P KN GE++ + GCAFVRD E+G +EM+Q +Y+ +++ ++ + TS+IP SP D +DE G+ F R +VGSLMW++ TRPDI+NA+RA ARHSH P HWKA Q++ Y+ T + LKF + + + V+ DAD+A+ +NDRRSVSG V++ + W S TQKCV+ +T EAEY+A+ D KEALF+ +L FL+P ++DV DNEGA A+A NP S+SRSKHIDV+ HF+R L G
Sbjct: 343 SPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPYPFLKPAYCRWQRPTKLLPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEVLQSQLPPLQPSLPIEVAE--EGGEDSDDNVETEVWPLVGRGVAHTLLKRDAVPSGARVEEV--ESVGAGSVGPSFSVPSSPAEPSSLANNSFDSVASVSSPMPVNDGEGQGGQESGELEMGDPGGDDEEESMEQXXXXXXXXXXXXXPVEAEAPPPAARRPRHVAELADFNTASRENDEVREGRTRAQTR--AVNQQSVPGLVASLGPISATE----LVYTLMSEQRAGDETELPKELVQDVESVPDSYQEAQRSKYAKIWEGAMSAEVEGLIRAGTFTLA--AKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSEL-KRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPF---REVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDNSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSAKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEG 1189
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE) HSP 1 Score: 546 bits (1407), Expect = 2.480e-161 Identity = 348/852 (40.85%), Postives = 488/852 (57.28%), Query Frame = 1
Query: 2605 NPEYNGVAERGLAMIESAALAARIQASELFPGFDIPEKPSLWAEAMSWACDAYNRTATVANPGNRSPHEMFYGKIPQNSPIPFLKPGYCKYKRMNKMDPKARECFYLGPARNHPRESKRVFVHTGKVIVTRNVTWAHVGSGRSLITRSKPSVVGE--GDESGQDREASASEDGESVSEGTRSEI------VTPEAEAATPITS------GRAPTSEAR--------SSQCGVSTDPEG-----------MTPGESLAD--------ASADASSSLGPDKRYAALGTGEARRLAEYILGPLRSS---LRGRTRGEERRLTTDA-QGLVSLEDELAIAQAVEEEAMLEEAYMADAGVSIEMPTGKIQDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLK---LTVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG 5016
+P+YNGVAERGL +IE AA+AARIQA LF +P+ LWAEAM WAC+A N TA ANP ++SP+EM+YG+ P PFLKP YCK++R +K+ PK CFY+GP+R+HPR+ RV G + TR+VTW + S P + E G+ES D E E V G + V P EA + S GR+P+ SS TD +G M PG+ D A+AS + R+ A LA++ P R + GRTR + R + + GLV+ + + + ++L E DA +E+P +QD+ P + E +S ++ + E+EGL+ G FT +IP G ++ ++WV +K DE G VK K+RLVAKGF Q GVDY ET SPT AA ++++ A+A + L + H D+ QAFVQ+ L E+FM+LP GCG ++GKV+RL K YGLKQA R ++ LV+ L ++IG EQ ++PCV R M+ DEV MV +HVDDI+ +G KS L + P KN GE+K + GCAF+RD E+G +E++Q +Y+ +++ ++ I TS+IP SP D +DE G+ F R +VG LMW++ TRPDI+NA+RA ARHSH P R WKA Q++ Y+ +T + LK+ R S + V+ DAD+A+ + DRRSVSG VI+ + W S TQKCV+ +T EAEY+A+ D KE+LF+ +L FL+P + ++DV DNEGA A+A NP S+ RSKHIDV+ HF+R L G
Sbjct: 426 SPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPYPFLKPAYCKWQRPSKLFPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEALPSQLPPPQPPLPIEIAEEGGEESDNDVET---EVWPLVGRGVAHTLLRNNAAVVPSGEAIDVVESVDAGSVGRSPSPXXXXXXXVPSVSSPAPEFTDGDGQGGQDVGEIESMGPGDQETDPVXXXXXEVEAEASPPVARRPRHVA-------ELADFN-NPARENDEVREGRTRAQTRAVNQQSVPGLVATLGPVFATEIIN--SLLAEQRAGDA---VELPKELVQDVESEPGSYQEARQSKHAAIWDGAMSAEVEGLIRAGTFTLA--VKIPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFRQKYGVDYLETFSPTANAASIRLLVALACKYDLELLHWDIEQAFVQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDL-KRIGFEQSLSDPCVLRFMMGDEVLGMVAIHVDDILYAGTKSLAKVVVEALGDSLPTKNLGEVKFFLGCAFIRDREAGTIEISQESYIRSVLERFKICRTSSIPASPANDNRSVMEDEEAGDVPF---REVVGCLMWVANGTRPDISNAVRAVARHSHEPKKRDWKAAQKILNYLLATAHLTLKYKRDSTVDDVGTLVYVDADFASKATDRRSVSGALVIVAACLVAWLSWTQKCVSQSTSEAEYLAMGDGVKESLFVNGMLQFLRPSVEPRKIDVLEDNEGAIALAENPLSSCRSKHIDVRHHFLRNLTEEG 1255
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE) HSP 1 Score: 518 bits (1335), Expect = 4.030e-153 Identity = 333/863 (38.59%), Postives = 474/863 (54.92%), Query Frame = 1
Query: 2605 NPEYNGVAERGLAMIESAALAARIQASELFPGFDIPEKPSLWAEAMSWACDAYNRTATVANPGNRSPHEMFYGKIPQNSPIPFLKPGYCKYKRMNKMDPKARECFYLGPARNHPRESKRVFVHTGKVIVTRNVTWAHVGSGRSLITRSKPS--------------------VVGEGDESGQDREASASEDGESVSEGTRSEIVTPEAEAATPI--------------------TSGRAPTSEARSSQCGVSTDPEG--------------MTPGESLADASADASSSLGPDKRYAALGTGEARRLAEYILGPLRSS--LRGRTRGEERRLTTDA-QGLVSLEDELAIAQAVEEEAMLEEAYMADAGVSIEMPTGKIQDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKL--TVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG 5016
+P+YNGVAERGL +IE AA+AARIQA LF +P+ LWAEAM WAC+A N TA ANP ++SP+EM+YG+ P PFLKP YC+++R +K+ PK CFY+GP+R+HPR+ RV G + TR+VTW + S +VG G A E+V GT E+V E+ S P + S + DP G +AS G R+ A LA++ + GRTR + R + + GL++ ++ + + A+L E AG E+P +QD+ P + E RS + K +E ++ E+EGL+ G FT ++P G ++ ++WV +K DE G VK K+RLVAKGF Q GVDY ET SPT AA +++ A+A + L + H D+ QAFVQ+ L E+FM++P GCG ++ KV+RL K YGLKQA R ++ LV+ L ++IG EQ ++PCV R M+ DEV MV +HVDDI+ +G KS + A L + P KN GE+K + GC ++RD ++G +E++Q +Y+ +++ ++ I TS+IP S D ++E G+ F R +VGSLMW++ TR DI+NA+RA ARHSH P HWKA Q++ Y+ T + LKF R S + + V+ DAD+A+ + DRRSVSG V + + W S TQKCV+ +T EAEY+A+ D KEALF+ +L FL+P + ++DV DNEGA A+A NP S+SRSKHIDV+ HF+R L G
Sbjct: 529 SPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPYPFLKPAYCRWQRPSKLLPKGESCFYVGPSRDHPRDCHRVLTRAGTIQETRDVTWEVLPSQLXXXXXXXXXXXXXXXXXXXXXXXXXEVWPLVGRG-------VAHTLLKREAVPPGT--EVVEVESXXXXXXXXXXXXXXXXXXXXXXXXXSVSSPVPEIDVNSGEIETG-DPGGDDEXXXXXXXXXXXXXXXXXXRPVETEASPPTGRRPRHVA-------ELADFNTAARENDEVREGRTRAQTRAVNQQSVPGLMATIGPISGTEVLY--ALLSEQR---AGDETELPKELVQDVESEPGSYEEAQRSKYAKIWEGARSAEVEGLMRAGTFTLA--VKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASFRLVVALACKYNLELLHWDIEQAFVQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSEL-KRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDILYAGTKSLAEVVVAALGDSLPTKNLGEVKFFLGCEYIRDRKAGTIEISQESYIRSVLERFNIVRTSSIPASLNNDDRSLMEEEGAGDVPF---REVVGSLMWIASQTRADISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKRDSSVDVGTLVYVDADFASKATDRRSVSGAMVFVAAMLVVWISRTQKCVSQSTSEAEYLAMGDGVKEALFVNGMLQFLRPSVKPRKIDVLEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEG 1363
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE) HSP 1 Score: 519 bits (1336), Expect = 2.260e-150 Identity = 342/921 (37.13%), Postives = 481/921 (52.23%), Query Frame = 1
Query: 2608 PEYNGVAERGLAMIESAALAARIQASELFPGFDIPEKPSLWAEAMSWACDAYNRTATVANPGNRSPHEMFYGKIPQ-NSPIPFLKPGYCKYKRMNKMDPKARECFYLGPARNHPRESKRVFVHTGKVIVTRNVTWAHVGSGRSLITRSKPSVVGEGDESGQDREASASEDGESVSEGTRSEIVTPEAEAATPITSGRAPTSEARSSQC-----GVSTDPEGMTPGESLAD-------------------------------------------------------ASADASSSLGPDK----------RYAALGTGEARRLAEYILGPLRSSL-RGRTRGEERR--------------------LTT--DAQGLVSLEDELAIAQAVEEEAMLEEAYM----------------------ADAGVSIEMPTG-KIQDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLTVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAGK 5019
P+YNGVAER L +I AALA+RIQA E+FP D P P+LWAEA++ AC N TAT ANPG++SP+EMF+GK P S PFLKP K +R K PK R+ +YLGPA NHPR+ R+ G V+ TRN TW HV + + + + +GEG E SED S G ++ + T I T AR + G+ D P L + D S G D RY G+ GPLR L RGRT L+T + +G L E VEE M E A ++ +SI P G K D+ P T ++ S +RK ++ + + E++G G F+ + E++P+GRK V++KWV YK DEKG K+RLVA+GFSQV G DY+ ++S PA + +K+ A A E GLP H D+ QA+ A ++EE+++R+ G G + GKV+++ + YGLKQ+GREW N LV+ G EQC+A+PCVFR +V +V ++ ++VDDI+ G + ++ L++ PVK+ GE Y GCA RD E G ++Q AY+ L+ ++GI+ T++ P P DLGP++DDEPG + R +G LMW + TRPDIA AL A R++H P+ R WKAL Q+ +Y+N+T ++G+ +VRGSGL L V+ DA YA RRSV+G+AV +G T + S TQ+ V+ +T EAEY+A + KEALF+RAVL F+ PE +G ++ V DN+GA ++ NP S++RSKHIDV+ HFIR L ++G+
Sbjct: 856 PKYNGVAERWLGIISDAALASRIQAKEMFP--DAPTDPALWAEAIACACHQLNCTATTANPGDKSPYEMFHGKPPPAGSVYPFLKPAVYKARRERKSHPKGRKGWYLGPAHNHPRDCVRMLTEAGTVVTTRNFTWRHVPAVSPVPPQLPLADIGEGGE------GEGSEDTSSRGGGGEEDLASESDLDMTEIRGPGRATLPARENAPAVPGNGIQGDEGSAPPSPHLGGGDFGGGDGIPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDVDGEDSGGSDDGEYKYDPADTRYPPGTQGKKLLWGASKEGPLRYGLQRGRTXXXXXXXXXXXXXXXXXXXXXXXXXLLSTVLEVEGGKELVAEYLQRSLVEERQMEEMALXXXXXXXXXXSDVPVERPFNIDCSNPELSIPSPIGQKPNDVEALPLTYEDVKWSKYRKQWDEAIKKEMDGHEKTGTFSKI--EKLPEGRKAVSTKWVFDYKTDEKGLITDFKARLVARGFSQVHGQDYHHSSSACPAVSSIKLAMAFATEGGLPTRHFDIKQAYTHAKIQEELYVRIADGSGAMAGKVLKVERALYGLKQSGREWGFEAANILVDS-GYEQCRADPCVFRKIVDGKVVSIIVIYVDDIMYVGSEEEGEELLTSLRKTLPVKDLGECTWYDGCAIERDLELGTTTLSQKAYIAGLMDRFGITTTASTPADPNADLGPKRDDEPGVDKPV---RQAIGCLMWPATFTRPDIATALNAVQRNAHAPTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVLSFIAPETSGAKIKVLEDNQGAISLVQNPFSSARSKHIDVRFHFIRELFKSGR 1762
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5JCG0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG0_9PHAE) HSP 1 Score: 456 bits (1172), Expect = 5.850e-140 Identity = 240/494 (48.58%), Postives = 336/494 (68.02%), Query Frame = 1
Query: 3586 TQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLTVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG----KFVSCTWEQRSNM 5055
T A + +S +R+ +E + R E +G L G F+ VDG P+GR+ V+SKW T+K ++ G K K+RLVA+GFSQ+ VDY ++SP P++A +K++ AVANEK L + H DV QAF A L E++F+RLP GCGE + KV++ + YGLKQ+GR+W + LVE G EQCKA+PCVFR M D V D I+V+G C + A L + FP K+ GE + GCA RD E+G L ++QTAY++++V ++ + +TS+IP SPGVD+GP++DDE GG E+P+ R +GS+MW+S +RPDI+ A+RA ARH+H P+ RHWKA+ ++ AY+ T+++G+ + RGSGL L V+ DA YA A DRRSVSG+A +G T I S TQ V+ ++ EAEY+A + KEALF+RAVL F+ PE +G + V DN+GA A+ NP S++RSKHIDV+ HFIRGL R+G KFVS T EQ ++M
Sbjct: 2 TVAGVTKSVYREGWEQAMREEFDGHLGTGTFSFVDGT--PEGRRPVSSKWRFTWKTNKDGKIEKFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKSLKLNHWDVKQAFTHAKLDEDVFLRLPAGCGEKSHKVVKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMKDDVVXXXXXXXXDXILVAGSDDDCKELLASLNKAFPTKDLGECVWFDGCAVERDLEAGTLRISQTAYIDSIVNRFDVQSTSSIPASPGVDIGPKRDDESGG--EWPV-REAIGSMMWVSTFSRPDISFAVRAVARHAHAPAERHWKAIVKILAYLKETRDLGITYERGSGLGLAVYVDASYADAE-DRRSVSGLATTVGGTVISHGSKTQAIVSLSSTEAEYIAAGEGVKEALFVRAVLSFIAPETSGSSIQVLEDNQGAMALVQNPLSSARSKHIDVRYHFIRGLFRSGDISIKFVS-TSEQHADM 487
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 8.420e-135 Identity = 237/510 (46.47%), Postives = 350/510 (68.63%), Query Frame = 1
Query: 3541 EMPTGKI-QDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLTVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG----KFVSCTWEQRSNM 5055
E P GK D+ PP T A + +S +R+ +E + R E EG L G F+ VDG P+GR+ V+SKW ++K +++G K+RLVA+GFSQ+ VDY ++SP P++A +K++ AVANEKG+ + H DV QA+ A L EE+F++LP GCG+ + K+ + + YGLKQ+GR+W + LVE G EQCKA+PCVFR MV + V +++ ++VDDI+V+G C++ A L ++FP KN GE + + GCA RD E+G L ++QTAY++++V ++ + +TS IP +PG DLGP+++DE GG E+P+ R +GS+MW+S +RPD++ A+RA ARH+H P+ RHW A+Q++ Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSG+A +G T + S TQ V+ ++ EAEY+A + KEALF+RAVL F+ PE +G + V DN+GA A+ NP S+ R+KHIDV+ HFIRGL R+G KFV T EQ +++
Sbjct: 723 ESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGA--PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWPV-REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTT-EQHADL 1224
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5JC10_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC10_9PHAE) HSP 1 Score: 446 bits (1146), Expect = 2.940e-133 Identity = 233/510 (45.69%), Postives = 342/510 (67.06%), Query Frame = 1
Query: 3541 EMPTGKI-QDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLTVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATC-------EAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG----KFVSCT 5034
E P GK D+ PP T A + +S +R+ +E + R E EG L G F+ VDG P+GR+ V+SKW ++K +++G K+RLVA+GFSQ+ VDY ++SP P++A +K++ AVANEKG+ + H DV QA+ A L EE+F++LP GCG+ + ++ + + YGLKQ+GR+W + LVE G EQCKA+PCVFR MV + V +++ ++VDDI+V+G C++ A L ++FP KN E + + GCA RD E+G L ++QTAY++++V ++ + +TS IP SPGVDLGP++DDE GG E+P+ R +GS+MW+S +RPD++ A+RA ARH+H P+ RHW A+Q++ Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSG+A +G T + S TQ V+ ++ EAEY + KEALF+RAVL F+ PE +G + V DN+GA A+ NP S+ R+KHIDV+ HFIR L R+G KF+ T
Sbjct: 277 ESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGA--PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHEIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLSKKFPTKNLEECQWFDGCAIERDVETGTLRISQTAYIDSMVKRFDVQSTSRIPASPGVDLGPKRDDEKGG--EWPV-REAIGSIMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTXXXXXXTEAEYFTAGECVKEALFVRAVLSFVAPETSGSSIQVL-DNQGAMALVQNPLSSGRTKHIDVRFHFIRVLFRSGDISVKFIPTT 778
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 463 bits (1192), Expect = 4.540e-132 Identity = 237/510 (46.47%), Postives = 350/510 (68.63%), Query Frame = 1
Query: 3541 EMPTGKI-QDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLTVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG----KFVSCTWEQRSNM 5055
E P GK D+ PP T A + +S +R+ +E + R E EG L G F+ VDG P+GR+ V+SKW ++K +++G K+RLVA+GFSQ+ VDY ++SP P++A +K++ AVANEKG+ + H DV QA+ A L EE+F++LP GCG+ + K+ + + YGLKQ+GR+W + LVE G EQCKA+PCVFR MV + V +++ ++VDDI+V+G C++ A L ++FP KN GE + + GCA RD E+G L ++QTAY++++V ++ + +TS IP +PG DLGP+++DE GG E+P+ R +GS+MW+S +RPD++ A+RA ARH+H P+ RHW A+Q++ Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSG+A +G T + S TQ V+ ++ EAEY+A + KEALF+RAVL F+ PE +G + V DN+GA A+ NP S+ R+KHIDV+ HFIRGL R+G KFV T EQ +++
Sbjct: 1102 ESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGA--PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWPV-REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTT-EQHADL 1603
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 462 bits (1190), Expect = 2.050e-131 Identity = 237/510 (46.47%), Postives = 349/510 (68.43%), Query Frame = 1
Query: 3541 EMPTGKI-QDLPPPPTTQAELLRSPFRKAFELSQRVEIEGLLDVGCFTPVDGEEIPKGRKIVASKWVHTYKGDEKGYCVKTKSRLVAKGFSQVAGVDYNETTSPTPAAAPVKMIAAVANEKGLPVYHLDVSQAFVQAPLKEEIFMRLPLGCGELTGKVMRLLKCQYGLKQAGREWHMLLVNWLVEKIGLEQCKAEPCVFRLMVKDEVSLMVGVHVDDIIVSGGKSACDKFFAQLKERFPVKNQGELKMYTGCAFVRDWESGVLEMNQTAYVENLVAQYGISATSNIPGSPGVDLGPRKDDEPGGNDEFPLYRPLVGSLMWLSVMTRPDIANALRACARHSHNPSARHWKALQQVAAYVNSTKEIGLKFVRGSGLKLTVFADADYAAASNDRRSVSGVAVILGDTAIGWKSSTQKCVTTATCEAEYVALCDASKEALFMRAVLVFLQPELTGMRVDVFGDNEGAKAIANNPSSASRSKHIDVKLHFIRGLIRAG----KFVSCTWEQRSNM 5055
E P GK D+ PP T A + +S +R+ +E + R E EG L G F+ VDG P+GR+ V+SKW ++K +++G K+RLVA+GFSQ+ VDY ++SP P++A +K++ AVANEKG+ + H DV QA+ A L EE+F++LP GCG+ + K+ + + YGLKQ+GR+W + LVE G EQCKA+PCVFR MV V +++ ++VDDI+V+G C++ A L ++FP KN GE + + GCA RD E+G L ++QTAY++++V ++ + +TS IP +PG DLGP+++DE GG E+P+ R +GS+MW+S +RPD++ A+RA ARH+H P+ RHW A+Q++ Y+ T+++G+ + RGSGL L V+ DA YA + DRRSVSG+A +G T + S TQ V+ ++ EAEY+A + KEALF+RAVL F+ PE +G + V DN+GA A+ NP S+ R+KHIDV+ HFIRGL R+G KFV T EQ +++
Sbjct: 1122 ESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMREEFEGHLGTGTFSFVDGA--PEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVEN-GFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGG--EWPV-REAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYAD-TEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRSGDISVKFVPTT-EQHADL 1623 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig85.19895.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig85.19895.1 >prot_F-serratus_M_contig85.19895.1 ID=prot_F-serratus_M_contig85.19895.1|Name=mRNA_F-serratus_M_contig85.19895.1|organism=Fucus serratus male|type=polypeptide|length=840bp MISRVMPGCTTFPTSLMLQNPEYNGVAERGLAMIESAALAARIQASELFPback to top mRNA from alignment at F-serratus_M_contig85:547564..553209- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig85.19895.1 ID=mRNA_F-serratus_M_contig85.19895.1|Name=mRNA_F-serratus_M_contig85.19895.1|organism=Fucus serratus male|type=mRNA|length=5646bp|location=Sequence derived from alignment at F-serratus_M_contig85:547564..553209- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig85:547564..553209- >mRNA_F-serratus_M_contig85.19895.1 ID=mRNA_F-serratus_M_contig85.19895.1|Name=mRNA_F-serratus_M_contig85.19895.1|organism=Fucus serratus male|type=CDS|length=5040bp|location=Sequence derived from alignment at F-serratus_M_contig85:547564..553209- (Fucus serratus male)back to top |