prot_F-serratus_M_contig1264.1987.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig1264.1987.1
Unique Name	prot_F-serratus_M_contig1264.1987.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	93

Homology

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5JKS3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKS3_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 8.100e-18
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R WKAL+Q+ SY+NAT ++G+ +VRGSGL L VY DA YA     RRS +G+AV +G T +S  S TQ+ V+  T +A         KEA+F R+ L
Sbjct: 1058 PTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVL 1157

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5L175_9PHAE (Uncharacterized protein n=9 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L175_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 8.180e-18
Identity = 47/100 (47.00%), Postives = 64/100 (64.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R WKAL+Q+ SY+NAT ++G+ +VRGSGL L VY DA YA     RRS +G+AV +G T +S  S TQ+ V+  T +A         KEA+F R+ L
Sbjct: 1611 PTMRDWKALVQILSYLNATMDLGITYVRGSGLDLEVYVDASYADRDTGRRSVTGIAVTVGGTVVSHASKTQRIVSLSTSEAEYIAAGEGVKEALFVRAVL 1710

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5K588_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K588_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.320e-15
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:   66 PTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQPTTEAEYIAAGEGVKEALFVRGVL 165

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5KR64_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR64_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 3.500e-15
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:   24 PTERMWNALVRIMSYLNETKDLGIAYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVL 123

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5JRV3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV3_9PHAE)

HSP 1 Score: 77.0 bits (188), Expect = 4.780e-15
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:   92 PTERKWNALVRILSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVL 191

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5K887_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K887_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 5.620e-15
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:   24 PTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVL 123

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5JU54_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU54_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.100e-14
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:  183 PTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAGGEAVKEALFVRGVL 282

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BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5KCN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCN6_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.230e-14
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:  225 PTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVL 324

[Close]

BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5JUQ8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUQ8_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.410e-14
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:  278 PTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVL 377

[Close]

BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Match: A0A6H5KNB1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNB1_9PHAE)

HSP 1 Score: 76.6 bits (187), Expect = 2.550e-14
Identity = 41/100 (41.00%), Postives = 61/100 (61.00%), Query Frame = 0

Query:    1 PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRRSESGVAVVLGSTAISWKSNTQKCVTTVTCDA--------AKEAIFERSSL 92
            P+ R W AL+++ SY+N TK++G+ +VRGSGL L V+ D+ YA ++ DRRS +G+AV +G T +   + TQ      T +A         KEA+F R  L
Sbjct:  326 PTERMWNALVRIMSYLNETKDLGITYVRGSGLDLDVFVDSSYADSTVDRRSTTGLAVTVGGTVVCASTKTQPVTAQSTTEAEYIAAGEGVKEALFVRGVL 425

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig1264.1987.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5JKS3_9PHAE	8.100e-18	47.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5L175_9PHAE	8.180e-18	47.00	Uncharacterized protein n=9 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K588_9PHAE	2.320e-15	41.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5KR64_9PHAE	3.500e-15	41.00	Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JRV3_9PHAE	4.780e-15	41.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5K887_9PHAE	5.620e-15	41.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A6H5JU54_9PHAE	2.100e-14	41.00	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KCN6_9PHAE	2.230e-14	41.00	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5JUQ8_9PHAE	2.410e-14	41.00	Reverse transcriptase Ty1/copia-type domain-contai...	[more]
A0A6H5KNB1_9PHAE	2.550e-14	41.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039537	Retrotransposon Ty1/copia-like	PANTHER	PTHR11439	GAG-POL-RELATED RETROTRANSPOSON	coord: 1..85
None	No IPR available	PANTHER	PTHR11439:SF275		coord: 1..85

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig1264	contig	F-serratus_M_contig1264:116608..116886 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig1264.1987.1	mRNA_F-serratus_M_contig1264.1987.1	Fucus serratus male	mRNA	F-serratus_M_contig1264 116608..116886 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig1264.1987.1 ID=prot_F-serratus_M_contig1264.1987.1|Name=mRNA_F-serratus_M_contig1264.1987.1|organism=Fucus serratus male|type=polypeptide|length=93bp
PSPRHWKALLQVASYVNATKEIGLRFVRGSGLRLSVYADADYAAASNDRR
SESGVAVVLGSTAISWKSNTQKCVTTVTCDAAKEAIFERSSL*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR039537	Retrotran_Ty1/copia-like