mRNA_F-serratus_M_contig848.19874.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig848.19874.1
Unique NamemRNA_F-serratus_M_contig848.19874.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: D8LL65_ECTSI (Phosphatidylinositol-3-phosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL65_ECTSI)

HSP 1 Score: 428 bits (1101), Expect = 2.250e-135
Identity = 292/716 (40.78%), Postives = 357/716 (49.86%), Query Frame = 1 
Query:    1 IRCRDKKVYPFVVMRGASRTAEAVLLQSVRKVEEEISWLAQEDNFAHSVDTCRADASLDPEGKSLELNLDVSSILN--DPSSPLSRWTRGFPSEYHPAQEHIRQGIDEAS-WGWAGVNRSFSLCQTYGRHLVVPSALGEDDIVKASKGRSRSRIPALTWLHPMSGAGLCRSSQPLAGFRLNPSLLDDEKLLNAIRATVDSPPDNHVCSGTVSTSGSKSSSSVATDACAEEKASYGDHA-------------------------------------------EPSPTHEVLEHSRTRMWNSDEGSLESCAGSCVDQGVAGAEARQEGGALQGKPIIVKAKRNIEDEGSYKTACGAGIVVGVDEFRGKPRSRGSRDEGRGNEGSLADTKSRQGILFLEHSSSSESEKIKAWHPPTEATGASADNTAKGDVISKDSV---SPRISVGQSDFNLFPSDVSSRLPVLTDGAEKRSTESCLGSIRTTSAGVTSAVNEERPASRVVGEARDEPRPGGEHI-AVLRIMDARSVLSANAHRFLGKGYENIARLGGDGRASITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLLLLLVHAFCSR 1998
            I CRDK+ Y F V RGA+R  +AVLLQ VR+ E+EI+WL +EDNF+HS DTCR +ASLD  G++L L+ D  + L+  +P+   S  TRGFPS YHPA EH RQGI++++ W ++GVN+SF LC TYGR+LVVPSAL E  I KASK RSR RIP L+WLHP++GAGLCRSSQP+ G  +NPS  +DE+LL AIRA                                                                                     + SP   V +H R+     D+       G     G +G   R  G   Q    ++   R   D G                                                                                           S R S+G +           R P +       S  + LGSI  T                           G     AVLRI+DAR ++SA  H  LGKG+E I+RLGG  RAS+TFL+IPN HA+QQ+F  L+  C  +ED+PA LV++H  RW++ + ALL GAS V  YLEAGDPVLVHCSDGWDRT QLT+LAQLLLDPYYRTIEGFQVLV KDWCSFGHRFA RGG+G    + +SPIFPQFLDATYQLLRQFP SFEFSENLLLLL+HA+ SR
Sbjct:   12 IECRDKRTYYFSVARGATRADDAVLLQGVRRFEDEIAWLIEEDNFSHSSDTCRVNASLDSRGETLGLDPDTHAFLDGCEPTCDSSECTRGFPSGYHPALEHRRQGIEDSTEWAYSGVNKSFRLCPTYGRYLVVPSALDEAGIRKASKWRSRCRIPVLSWLHPLTGAGLCRSSQPMTGLGINPSSPEDEQLLMAIRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWQRSPA--VCDHGRSFRSGGDDAVQRLDGGGAGAAGRSGGNLRASGDDAQ----VIDWDRAF-DHGRINNGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSNRSSLGAAKVTPV------RPPRML------SVPASLGSISATXXXXXXXXXXXXXXXXXXXXXXXXXXXGERRASAVLRIVDARPMISAKGHLILGKGHEVISRLGGPRRASLTFLEIPNVHAMQQSFATLMSACSGREDDPAWLVNLHNSRWLDFVGALLSGASDVAEYLEAGDPVLVHCSDGWDRTSQLTALAQLLLDPYYRTIEGFQVLVSKDWCSFGHRFAVRGGHGRQGAAESSPIFPQFLDATYQLLRQFPASFEFSENLLLLLLHAYHSR 708
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BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: A0A6H5KWR5_9PHAE (Myotubularin phosphatase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWR5_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 8.760e-65
Identity = 119/196 (60.71%), Postives = 150/196 (76.53%), Query Frame = 1 
Query:    1 IRCRDKKVYPFVVMRGASRTAEAVLLQSVRKVEEEISWLAQEDNFAHSVDTCRADASLDPEGKSLELNLDVSSILN--DPSSPLSRWTRGFPSEYHPAQEHIRQGIDEAS-WGWAGVNRSFSLCQTYGRHLVVPSALGEDDIVKASKGRSRSRIPALTWLHPMSGAGLCRSSQPLAGFRLNPSLLDDEKLLNAIRA 579
            I CRDK+ Y F V RG +R  +AVLLQ VR+ E+EI+WL +EDNFAHS DTCR +ASLDP G++L L+ D  + L+  +P+   S  TRGFPS YHPA EH RQG+D+++ W ++GVN+SF LC TYGR+LVVP+AL E  I KASK RSR RIP L+WLHP++GAGLCRSSQP+ G  +NPS  +DE+LL AIRA
Sbjct:  207 IECRDKRTYYFSVARGPTRADDAVLLQGVRRFEDEIAWLIEEDNFAHSSDTCRVNASLDPRGETLGLDPDTHAFLDGCEPTCDSSECTRGFPSGYHPALEHRRQGVDDSTEWAYSGVNKSFRLCPTYGRYLVVPAALDEAGIRKASKWRSRCRIPVLSWLHPLTGAGLCRSSQPMTGLGINPSSPEDEQLLMAIRA 402
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BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: F0Y8Q0_AURAN (Myotubularin phosphatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y8Q0_AURAN)

HSP 1 Score: 214 bits (544), Expect = 2.890e-59
Identity = 107/210 (50.95%), Postives = 138/210 (65.71%), Query Frame = 1 
Query: 1369 PRPGGEHIAVLRIMDARSVLSANAHRFLGKGYENIARLGGDGRASITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLLLLLVHAFCSR 1998
            P+  G    VLRI+D R VL+A A+  +GKG+E ++RLGG   A++ FLDI N H +Q++F  L E     ++       +H  RW+ ++S LL+GA  V  +   GDPVLVHCSDGWDRT Q+  LAQ LLDPY RTI+GF VLVEKDWC+FGH F  RGG+G +P   T PIF QFLDA  Q++ Q PT+ EF+E  L +L  A  SR
Sbjct:  103 PKARGTGAPVLRIVDCRPVLNAKANAAMGKGHEVMSRLGGKESATLEFLDIANIHGMQESFRVLREALGAPDEGDGVYRAVHDSRWLNHVSLLLRGAVAVADHSAGGDPVLVHCSDGWDRTAQVCGLAQFLLDPYCRTIDGFGVLVEKDWCAFGHMFRERGGFGSDPQQETGPIFLQFLDAVSQIMWQCPTACEFTEEFLEVLADAERSR 312
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BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: A0A5D6Y8C1_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y8C1_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.750e-51
Identity = 105/195 (53.85%), Postives = 136/195 (69.74%), Query Frame = 1 
Query: 1393 AVLRIMDARSVLSANAHRFLGKGYENIARLGGDG--RASITFLDIPNAHAVQQNFNALVETCRTQED-NPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLL 1968
            +VL I+DAR  L+A ++   GKG+E++ +   DG   ASITF+ I N H V+ +F  L +     ED N    V     RW+E++ ++L+GAS V A+LE GD VLVHCSDGWDRT QL+SLAQL+LDPY+RT+EGF +L+EKDWC+FGH F  R   GH  + +TSPIFPQFLDA YQL  QFPT F+F+E  L
Sbjct:  610 SVLHIVDARPELNAKSNALTGKGHESVKQYDRDGVPTASITFMGIDNIHVVRSSFAGLAQALYEVEDANFFGAVQKS--RWLEHVCSVLQGASEVAAHLERGDAVLVHCSDGWDRTAQLSSLAQLMLDPYFRTLEGFAILIEKDWCAFGHMFKKR--CGHPTSDQTSPIFPQFLDAVYQLTLQFPTHFQFNELFL 800
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BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: K3WJF8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJF8_GLOUD)

HSP 1 Score: 201 bits (511), Expect = 1.060e-50
Identity = 106/195 (54.36%), Postives = 133/195 (68.21%), Query Frame = 1 
Query: 1393 AVLRIMDARSVLSANAHRFLGKGYENIARLGGDGR--ASITFLDIPNAHAVQQNFNALVETCRTQED-NPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLL 1968
            +VL I+DAR  L+A ++   GKG+E+  +   DG   ASITF+ I N H V+ +F  L +     ED N    V     RW+E++  +L+GAS V  +LE GD VLVHCSDGWDRT QL++LAQL+LDPYYRT+EGF +LVEKDWCSFGH F  R   GH  + +TSPIFPQFLDA YQL  QFPT F+F+E  L
Sbjct:  645 SVLHIVDARPELNAKSNALTGKGHESTKQYDRDGTPMASITFMGIDNIHVVRSSFAGLAQALYDVEDANFFGAVQKS--RWLEHVCNILQGASEVAMHLERGDAVLVHCSDGWDRTAQLSALAQLMLDPYYRTLEGFAILVEKDWCSFGHMFKKR--CGHPTSDQTSPIFPQFLDAVYQLTLQFPTHFQFNELFL 835
[Close]
BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: A0A1V9Y998_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Y998_9STRA)

HSP 1 Score: 194 bits (493), Expect = 6.230e-50
Identity = 101/202 (50.00%), Postives = 137/202 (67.82%), Query Frame = 1 
Query: 1369 PRPGGEHIAVLRIMDARSVLSANAHRFLGKGYENIARLGGDGR--ASITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLL 1968
            P+P     AV+ I+DAR  ++A ++   GKG+E+      DG   ASI F+ I N H V+ +FN L +    Q D+      +   RW+E+I+++L+GA+ + ++LE GD VLVHCSDGWDRT QL++LAQL+LDP+YRTIEGF +LVEKDWCSFGH FA R  +  + +  TSP+F QFLDA YQL  QFPT F+F+E  L
Sbjct:   27 PKPN----AVVHIVDARPEINAKSNALAGKGHESAKHYDRDGVPCASIAFMGIDNIHVVRTSFNVLSQALY-QVDDTTFFSTLQKSRWLEHITSILQGATEMASHLERGDAVLVHCSDGWDRTSQLSALAQLMLDPFYRTIEGFAILVEKDWCSFGHMFAKRCAFPTSDD--TSPVFLQFLDAVYQLTLQFPTHFQFNEMYL 221
[Close]
BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: A0A421FNX7_9STRA (Protein-tyrosine-phosphatase n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421FNX7_9STRA)

HSP 1 Score: 198 bits (503), Expect = 7.290e-50
Identity = 100/214 (46.73%), Postives = 143/214 (66.82%), Query Frame = 1 
Query: 1333 PASRVVGEARDEPRPGGEHIAVLRIMDARSVLSANAHRFLGKGYENIARLGGDG--RASITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLL 1968
            PA +  G  R+   P  +  ++L I+DAR  ++A ++   GKG+E++ +   DG   A+ITF+ I N H V+ +   L +     ED+      +   RW+E++ ++L+GAS V  +LE GD VLVHCSDGWDRT QL++LAQ++LDPYYRT+EGF +L+EK+WCSFGH F  R   GH+ + +TSPIF QF+DA YQL  QFPT F+++E LL
Sbjct:  526 PAEQASGRPRNYAMP--KKNSILHIVDARPEINAKSNALAGKGHESVKQYDRDGVATAAITFMGIDNIHVVRNSLAGLAQALYEVEDSNF-FGSVQKSRWLEHVCSILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQMMLDPYYRTLEGFAILIEKEWCSFGHMFQKR--CGHSTSDQTSPIFLQFIDAVYQLTLQFPTHFQYNELLL 734
[Close]
BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: A0A0P1AHU8_PLAHL (Myotubularin-related protein 2 isoform 1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AHU8_PLAHL)

HSP 1 Score: 198 bits (504), Expect = 8.250e-50
Identity = 116/256 (45.31%), Postives = 159/256 (62.11%), Query Frame = 1 
Query: 1225 RLPVLT-----DGAEK-RSTESCLGSIRTTSAGVTSAVNEERPASRVVGEARDEPRPGGEHIAVLRIMDARSVLSANAHRFLGKGYENIARLGGDG--RASITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLL 1968
            RLPVLT      GA   RS++   G +R+TS      +   R A+     A    R   +  +V+ I+DAR  ++A ++   GKG+E++ +   DG   A+ITF+ I N H V+ + N L +     ED+      +   RW+E+I ++L+GAS V  +LE GD VLVHCSDGWDRT QL++LAQ++LDPYYRT+EGF +L+EKDWCSFGH F  R    H  + +TSPIF QF+DA YQL  QFPT F+F+E LL
Sbjct:  578 RLPVLTWIHPRTGAPLCRSSQPNTGVLRSTSPEDKKLIWAIRDAAIPADHAAKSIRTLPKKNSVVHIVDARPEINAKSNALAGKGHESVKQYDRDGVSTAAITFMGIDNIHVVRNSLNGLAQALYEVEDSNF-FGAVQKSRWLEHICSILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQIMLDPYYRTLEGFAMLIEKDWCSFGHNFQKR--CSHPTSDQTSPIFLQFIDAVYQLTLQFPTHFQFNELLL 830
[Close]
BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: A0A3F2RFR1_9STRA (Protein-tyrosine-phosphatase n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RFR1_9STRA)

HSP 1 Score: 198 bits (503), Expect = 1.490e-49
Identity = 100/214 (46.73%), Postives = 143/214 (66.82%), Query Frame = 1 
Query: 1333 PASRVVGEARDEPRPGGEHIAVLRIMDARSVLSANAHRFLGKGYENIARLGGDG--RASITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLL 1968
            PA +  G  R+   P  +  ++L I+DAR  ++A ++   GKG+E++ +   DG   A+ITF+ I N H V+ +   L +     ED+      +   RW+E++ ++L+GAS V  +LE GD VLVHCSDGWDRT QL++LAQ++LDPYYRT+EGF +L+EK+WCSFGH F  R   GH+ + +TSPIF QF+DA YQL  QFPT F+++E LL
Sbjct: 2182 PAEQASGRPRNYAMP--KKNSILHIVDARPEINAKSNALAGKGHESVKQYDRDGVATAAITFMGIDNIHVVRNSLAGLAQALYEVEDSNF-FGSVQKSRWLEHVCSILQGASEVATHLERGDAVLVHCSDGWDRTAQLSALAQMMLDPYYRTLEGFAILIEKEWCSFGHMFQKR--CGHSTSDQTSPIFLQFIDAVYQLTLQFPTHFQYNELLL 2390
[Close]
BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Match: T0QJT8_SAPDV (Protein-tyrosine-phosphatase n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QJT8_SAPDV)

HSP 1 Score: 195 bits (496), Expect = 6.890e-49
Identity = 99/194 (51.03%), Postives = 134/194 (69.07%), Query Frame = 1 
Query: 1393 AVLRIMDARSVLSANAHRFLGKGYENIARLGGDGRA--SITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALLKGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQVLVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFEFSENLL 1968
            AV+ I+DAR  ++A ++   GKG+E+      DG A  SI F+ I N H V+ +FN L +    Q D+      +   RW+E+I+++L+GA+ V ++LE GD VLVHCSDGWDRT QL++LAQ++LDPYYRT+EGF +LVEKDWCSFGH FA R  +  + +  TSP+F QFLDA YQL  QFPT F+F+E  L
Sbjct:  475 AVVHIVDARPEINAKSNALAGKGHESAKHYDRDGVACASIAFMGIDNIHVVRTSFNVLSQALY-QVDDTTFFSTLQKSRWLEHITSILQGATEVASHLERGDAVLVHCSDGWDRTSQLSALAQIMLDPYYRTLEGFAILVEKDWCSFGHMFAKRCAFPTSDD--TSPVFLQFLDAVYQLTLQFPTHFQFNEMFL 665
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig848.19874.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL65_ECTSI2.250e-13540.78Phosphatidylinositol-3-phosphatase n=1 Tax=Ectocar... [more]
A0A6H5KWR5_9PHAE8.760e-6560.71Myotubularin phosphatase domain-containing protein... [more]
F0Y8Q0_AURAN2.890e-5950.95Myotubularin phosphatase domain-containing protein... [more]
A0A5D6Y8C1_9STRA1.750e-5153.85Protein-tyrosine-phosphatase n=1 Tax=Pythium brass... [more]
K3WJF8_GLOUD1.060e-5054.36Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9Y998_9STRA6.230e-5050.00Protein-tyrosine-phosphatase n=1 Tax=Achlya hypogy... [more]
A0A421FNX7_9STRA7.290e-5046.73Protein-tyrosine-phosphatase n=1 Tax=Phytophthora ... [more]
A0A0P1AHU8_PLAHL8.250e-5045.31Myotubularin-related protein 2 isoform 1 n=1 Tax=P... [more]
A0A3F2RFR1_9STRA1.490e-4946.73Protein-tyrosine-phosphatase n=4 Tax=Phytophthora ... [more]
T0QJT8_SAPDV6.890e-4951.03Protein-tyrosine-phosphatase n=2 Tax=Saprolegnia T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig848contigF-serratus_M_contig848:301171..305106 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score441.8
Seed ortholog evalue5.6e-121
Seed eggNOG ortholog2880.D8LL65
KEGG koko:K01104,ko:K18081
KEGG Pathwayko00562,ko01100,ko04070,map00562,map01100,map04070
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity
EggNOG OGsKOG4471@1,KOG4471@2759
EC3.1.3.48,3.1.3.64,3.1.3.95
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons7
Model size2001
Cds size2001
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932498.7389598-CDS-F-serratus_M_contig848:301170..3013141622932498.7389598-CDS-F-serratus_M_contig848:301170..301314Fucus serratus maleCDSF-serratus_M_contig848 301171..301314 +
1690964337.8848028-CDS-F-serratus_M_contig848:301170..3013141690964337.8848028-CDS-F-serratus_M_contig848:301170..301314Fucus serratus maleCDSF-serratus_M_contig848 301171..301314 +
1622932498.7620134-CDS-F-serratus_M_contig848:301942..3021331622932498.7620134-CDS-F-serratus_M_contig848:301942..302133Fucus serratus maleCDSF-serratus_M_contig848 301943..302133 +
1690964337.8980448-CDS-F-serratus_M_contig848:301942..3021331690964337.8980448-CDS-F-serratus_M_contig848:301942..302133Fucus serratus maleCDSF-serratus_M_contig848 301943..302133 +
1622932498.778659-CDS-F-serratus_M_contig848:302441..3025291622932498.778659-CDS-F-serratus_M_contig848:302441..302529Fucus serratus maleCDSF-serratus_M_contig848 302442..302529 +
1690964337.9111192-CDS-F-serratus_M_contig848:302441..3025291690964337.9111192-CDS-F-serratus_M_contig848:302441..302529Fucus serratus maleCDSF-serratus_M_contig848 302442..302529 +
1622932498.792461-CDS-F-serratus_M_contig848:302722..3036671622932498.792461-CDS-F-serratus_M_contig848:302722..303667Fucus serratus maleCDSF-serratus_M_contig848 302723..303667 +
1690964337.925418-CDS-F-serratus_M_contig848:302722..3036671690964337.925418-CDS-F-serratus_M_contig848:302722..303667Fucus serratus maleCDSF-serratus_M_contig848 302723..303667 +
1622932498.8105261-CDS-F-serratus_M_contig848:304045..3042911622932498.8105261-CDS-F-serratus_M_contig848:304045..304291Fucus serratus maleCDSF-serratus_M_contig848 304046..304291 +
1690964337.9355826-CDS-F-serratus_M_contig848:304045..3042911690964337.9355826-CDS-F-serratus_M_contig848:304045..304291Fucus serratus maleCDSF-serratus_M_contig848 304046..304291 +
1622932498.823984-CDS-F-serratus_M_contig848:304492..3046751622932498.823984-CDS-F-serratus_M_contig848:304492..304675Fucus serratus maleCDSF-serratus_M_contig848 304493..304675 +
1690964337.9439256-CDS-F-serratus_M_contig848:304492..3046751690964337.9439256-CDS-F-serratus_M_contig848:304492..304675Fucus serratus maleCDSF-serratus_M_contig848 304493..304675 +
1622932498.842652-CDS-F-serratus_M_contig848:304902..3051061622932498.842652-CDS-F-serratus_M_contig848:304902..305106Fucus serratus maleCDSF-serratus_M_contig848 304903..305106 +
1690964337.9525099-CDS-F-serratus_M_contig848:304902..3051061690964337.9525099-CDS-F-serratus_M_contig848:304902..305106Fucus serratus maleCDSF-serratus_M_contig848 304903..305106 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig848.19874.1prot_F-serratus_M_contig848.19874.1Fucus serratus malepolypeptideF-serratus_M_contig848 301171..305106 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig848.19874.1

>prot_F-serratus_M_contig848.19874.1 ID=prot_F-serratus_M_contig848.19874.1|Name=mRNA_F-serratus_M_contig848.19874.1|organism=Fucus serratus male|type=polypeptide|length=667bp
IRCRDKKVYPFVVMRGASRTAEAVLLQSVRKVEEEISWLAQEDNFAHSVD
TCRADASLDPEGKSLELNLDVSSILNDPSSPLSRWTRGFPSEYHPAQEHI
RQGIDEASWGWAGVNRSFSLCQTYGRHLVVPSALGEDDIVKASKGRSRSR
IPALTWLHPMSGAGLCRSSQPLAGFRLNPSLLDDEKLLNAIRATVDSPPD
NHVCSGTVSTSGSKSSSSVATDACAEEKASYGDHAEPSPTHEVLEHSRTR
MWNSDEGSLESCAGSCVDQGVAGAEARQEGGALQGKPIIVKAKRNIEDEG
SYKTACGAGIVVGVDEFRGKPRSRGSRDEGRGNEGSLADTKSRQGILFLE
HSSSSESEKIKAWHPPTEATGASADNTAKGDVISKDSVSPRISVGQSDFN
LFPSDVSSRLPVLTDGAEKRSTESCLGSIRTTSAGVTSAVNEERPASRVV
GEARDEPRPGGEHIAVLRIMDARSVLSANAHRFLGKGYENIARLGGDGRA
SITFLDIPNAHAVQQNFNALVETCRTQEDNPARLVHMHGLRWMENISALL
KGASRVCAYLEAGDPVLVHCSDGWDRTPQLTSLAQLLLDPYYRTIEGFQV
LVEKDWCSFGHRFATRGGYGHNPNSRTSPIFPQFLDATYQLLRQFPTSFE
FSENLLLLLVHAFCSRR
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mRNA from alignment at F-serratus_M_contig848:301171..305106+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig848.19874.1 ID=mRNA_F-serratus_M_contig848.19874.1|Name=mRNA_F-serratus_M_contig848.19874.1|organism=Fucus serratus male|type=mRNA|length=3936bp|location=Sequence derived from alignment at F-serratus_M_contig848:301171..305106+ (Fucus serratus male)
ATCCGTTGCCGCGATAAAAAAGTTTACCCCTTCGTGGTGATGAGAGGAGC
ATCGCGAACGGCCGAGGCCGTCCTACTGCAAAGCGTCAGGAAGGTTGAGG
AGGAGATATCGTGGCTTGCACAGGAAGACAACTTCGCACACTCGGTGAGA
GGCTGAGCCCTAAAAGGGGGTCAACACGGGGGAAGGGGATGGACCACGAA
AGCTGAGAAGCTTATGATGCGCAGAGGCGACAGATGCCCATTATGTTCCG
TGGTCGGTTGCAAGATATGTCTCAAGGTCGACGAATGTTGGTTCTGCACG
GCCCGTGTGTGCTTATCGCGCCTTTTGCTCCGAATGGGCTTCGTTTTTTT
CCCCTCTAGTCGTACTTATTACTCATGCCGATTCTGCTAGGTGCTGCGAC
TCACGAGCTACTCTTTTAGCTAGAAGCCAAAGCGCGCCGACTTAGGGCTA
GAAGGTGTATGCCTCTATATTCTTCTTGTCTCTTCAGGCAGACCAAGCTA
GAGCCTTAGCAAGAAGATGACCCCGCCCCCCCCCCTCCAAGGTTTCGATG
ATTATGTCCGTCTCTCCAAGATACCATCACCTGATCTCTAATGTCTGCGG
TGCAAACGAGTTTCCAATCTCAAACCTGCTTTGACAGAACGGCATGCATG
GTATATTGGGGAACGGCGGTAAGATCATGGCGAACCGTTTCTCCTTAAAC
TCTAACCCTATCCTTGGCACCTTGGCCACCCTTTCACGGCCACCTCATTC
CTTGCTCATGCCCCCCGCGAAGGTGGATACCTGTCGCGCGGACGCTTCTC
TGGACCCTGAGGGCAAAAGCCTTGAGCTTAATCTCGACGTGAGCTCAATC
TTGAACGATCCTTCGAGCCCCCTCTCGAGGTGGACCAGAGGGTTTCCCAG
CGAATACCATCCTGCGCAGGAGCACATACGGCAGGGGATAGACGAGGCGA
GTTGGGGTTGGGCGTAAAGGGACACGGGGGAGAGAGGCTGGCTCATCAGT
TGTCGTGCTATCCTGACTTTTTTCACTGTGTGCATTCATCAGAGCCTACC
CACCCGTCTCTTGTAGCAAGACGCCGTGGCCATCGCACCTCATTCCGATG
TCTGTAAAGCTCGTAGCATCCCTATCACGGGAAACCATTTTGAAACCTCC
ACCGTACACGTGTTTGTCACCACCCTCCGGCGTGTCTACCTTTCTCCCCG
CCCTCAAACTTCTCCCCTCCCTCTCCAACTCCCCGCAATATAATAAAACA
GTCGGACCAGTGGCGTTCCAGCGGGGTAAACCGAAGCTTCTCTCTGTGCC
AGACGTACGGGCGCCACTTGGTGGTCCCTTCTGCCTTGGGAGAAGATGAT
ATCGTAAAGGTGGCGTGATCGATGAAATTCGTGAGCCTGAGTGCTTATCG
ATGAGGTGGAAGCGACAGCGGTATCACACAGGTCATTTCTCGTTCCTAAT
ACTACGGAAAACACCGTACTCCTAGTCTCACGCGCCTTCCCAACCCAACC
GCCCTCACGCGGCATGTGTTCACGTTGCCGTCATTCCTATAATCGCTTCC
AGGCTTCTAAAGGGCGCAGCCGGAGTCGTATCCCCGCGCTCACGTGGCTT
CATCCTATGTCCGGAGCTGGCCTCTGTCGCTCGAGCCAGCCCTTGGCGGG
GTTCAGGCTGAACCCGTCCTTGCTGGATGACGAGAAGCTGCTTAATGCGA
TAAGAGCGACCGTGGATTCACCCCCTGATAATCATGTTTGCTCTGGTACA
GTATCGACGAGCGGGAGCAAGAGTTCTTCTTCCGTCGCGACCGACGCCTG
CGCCGAGGAAAAAGCCTCCTACGGTGATCACGCCGAACCGTCGCCTACAC
ATGAGGTACTCGAGCATTCGCGCACGAGGATGTGGAACAGCGACGAAGGG
TCTCTCGAGAGCTGTGCTGGAAGTTGCGTTGACCAAGGCGTAGCTGGAGC
AGAGGCAAGGCAAGAAGGCGGGGCACTGCAGGGAAAGCCGATCATCGTGA
AGGCAAAACGCAATATCGAGGACGAGGGTAGTTACAAAACGGCTTGTGGA
GCTGGAATAGTCGTGGGAGTGGACGAGTTCCGCGGTAAACCACGTTCGAG
AGGCTCCCGCGACGAGGGGCGGGGAAACGAGGGTTCTCTAGCCGATACCA
AAAGCCGCCAAGGGATACTCTTCCTAGAGCACAGCAGCTCCAGCGAGAGC
GAAAAGATTAAGGCGTGGCACCCGCCCACGGAAGCTACGGGTGCGTCGGC
GGACAATACAGCAAAAGGTGATGTCATCTCGAAGGACTCTGTATCACCAC
GAATCTCGGTCGGACAAAGCGACTTTAATCTCTTTCCAAGCGATGTAAGC
AGCCGCCTTCCCGTCCTCACCGATGGAGCGGAGAAGCGGTCGACCGAGTC
ATGTCTTGGAAGCATACGCACGACTTCTGCGGGGGTCACTAGCGCCGTGA
ATGAAGAACGTCCCGCAAGCCGGGTGGTGGGTGAGGCCAGAGACGAGGTC
CCGCGGAATCTTGTGGGCGGGCAAGTATTGCCCGTCACAAAGACGACGCT
GTCCGTCAGTCCACCCGTCATGGATGATCTGGTACGCGACGTAGGCGACG
ATGAAGATGACGAGGCTGAAGACGTTTTGTCGCCGTCGATGACCTCGATC
TCCCTCCCACCGGAAATGCTGACGCTTGAATCCAACTCTGTCTTCACGAC
ACAGCGTGTCTTTGGAGCGGGGGTGGAAAATGTGGCGGCAACCGATAGCA
CCCCGTCCGAGCCATTCTTCGTGTCCAGAATGCAGACGCATCATATGCGC
GTCGGTAGTGATGTGACTGAGGCTGCCGTCCGTCCCGCCTGGCACCGATC
TCACTCCGCGCCAAATTTGATGGAGCCTAGACCCGGCGGGGAGCACATAG
CCGTGCTTCGAATTATGGACGCTCGGTCCGTGCTTTCGGCAAACGCCCAC
CGATTCTTGGGCAAGGGCTACGAGAACATCGCGCGACTGGGCGGGGACGG
GCGTGCGTCAATAACTTTCTTGGATATCCCGAACGCCCATGCAGTGCAGC
AGAATTTCAACGCACTGGTGGAGACGTGCCGCACGCAGGAGGACAACCCT
GCTCGGCTCGTTCACATGCACGTAAGCTTGTGCCGCGAGCACCGCTCCGG
GGCGTACACACACGCGTCACTACGTACACGAGCTGCTTTTTAAATAGTGT
CCGGAATTCCTCGATATTTTTCGGGCGACGGTGGGCGCAGACTCTACGTT
TTTGTCTTGCCGATCCGTTCCAGCCTATCCTGTTGCCCACCCCCCTCCCC
ACCCCCTCGTTTTTGTTTGTAGGGCTTGCGTTGGATGGAGAATATTAGCG
CGCTGCTCAAGGGAGCCTCGCGCGTGTGCGCATACCTTGAGGCCGGGGAT
CCGGTGCTTGTGCACTGCAGTGACGGCTGGGACCGAACGCCTCAGCTGAC
TTCCTTGGCGCAGTTACTACTGGACCCATACTACCGCACTATTGAAGGGT
TTCAGGTATAGCGGTGGTGGATGATATGACGTGACGGTCGCGTGGGAGAG
AGCCTTGACTTGCTCGAAAGGGACCATTTCGCGGTGAAACGTGCACTTGG
AGCCCTGGATTTCGAAAAGACGCTGTCACAAGTCATTTTAGTCTACGGGC
GAATGCGCAACAACAAACGATGACCACGTTGTTCCTTCGCGACCTTCTTC
CTTCGTTGACACCTTTACCTAACTAATTCCAGGTGTTGGTGGAGAAGGAC
TGGTGCAGTTTTGGCCACCGTTTCGCTACCCGGGGCGGATACGGACACAA
CCCCAACTCACGCACGTCGCCGATATTTCCGCAGTTTCTGGACGCGACGT
ACCAGCTTTTGCGGCAATTTCCCACATCCTTCGAGTTCTCGGAGAACCTC
CTGCTCCTTCTCGTACACGCCTTCTGCTCCAGGCGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig848:301171..305106+

>mRNA_F-serratus_M_contig848.19874.1 ID=mRNA_F-serratus_M_contig848.19874.1|Name=mRNA_F-serratus_M_contig848.19874.1|organism=Fucus serratus male|type=CDS|length=4002bp|location=Sequence derived from alignment at F-serratus_M_contig848:301171..305106+ (Fucus serratus male)
ATCCGTTGCCGCGATAAAAAAGTTTACCCCTTCGTGGTGATGAGAGGAGC
ATCGCGAACGGCCGAGGCCGTCCTACTGCAAAGCGTCAGGAAGGTTGAGG
AGGAGATATCGTGGCTTGCACAGGAAGACAACTTCGCACACTCGATCCGT
TGCCGCGATAAAAAAGTTTACCCCTTCGTGGTGATGAGAGGAGCATCGCG
AACGGCCGAGGCCGTCCTACTGCAAAGCGTCAGGAAGGTTGAGGAGGAGA
TATCGTGGCTTGCACAGGAAGACAACTTCGCACACTCGGTGGATACCTGT
CGCGCGGACGCTTCTCTGGACCCTGAGGGCAAAAGCCTTGAGCTTAATCT
CGACGTGAGCTCAATCTTGAACGATCCTTCGAGCCCCCTCTCGAGGTGGA
CCAGAGGGTTTCCCAGCGAATACCATCCTGCGCAGGAGCACATACGGCAG
GGGATAGACGAGGCGAGTTGGGGTTGGGCGTGGATACCTGTCGCGCGGAC
GCTTCTCTGGACCCTGAGGGCAAAAGCCTTGAGCTTAATCTCGACGTGAG
CTCAATCTTGAACGATCCTTCGAGCCCCCTCTCGAGGTGGACCAGAGGGT
TTCCCAGCGAATACCATCCTGCGCAGGAGCACATACGGCAGGGGATAGAC
GAGGCGAGTTGGGGTTGGGCCGGGGTAAACCGAAGCTTCTCTCTGTGCCA
GACGTACGGGCGCCACTTGGTGGTCCCTTCTGCCTTGGGAGAAGATGATA
TCGTAAAGCGGGGTAAACCGAAGCTTCTCTCTGTGCCAGACGTACGGGCG
CCACTTGGTGGTCCCTTCTGCCTTGGGAGAAGATGATATCGTAAAGGCTT
CTAAAGGGCGCAGCCGGAGTCGTATCCCCGCGCTCACGTGGCTTCATCCT
ATGTCCGGAGCTGGCCTCTGTCGCTCGAGCCAGCCCTTGGCGGGGTTCAG
GCTGAACCCGTCCTTGCTGGATGACGAGAAGCTGCTTAATGCGATAAGAG
CGACCGTGGATTCACCCCCTGATAATCATGTTTGCTCTGGTACAGTATCG
ACGAGCGGGAGCAAGAGTTCTTCTTCCGTCGCGACCGACGCCTGCGCCGA
GGAAAAAGCCTCCTACGGTGATCACGCCGAACCGTCGCCTACACATGAGG
TACTCGAGCATTCGCGCACGAGGATGTGGAACAGCGACGAAGGGTCTCTC
GAGAGCTGTGCTGGAAGTTGCGTTGACCAAGGCGTAGCTGGAGCAGAGGC
AAGGCAAGAAGGCGGGGCACTGCAGGGAAAGCCGATCATCGTGAAGGCAA
AACGCAATATCGAGGACGAGGGTAGTTACAAAACGGCTTGTGGAGCTGGA
ATAGTCGTGGGAGTGGACGAGTTCCGCGGTAAACCACGTTCGAGAGGCTC
CCGCGACGAGGGGCGGGGAAACGAGGGTTCTCTAGCCGATACCAAAAGCC
GCCAAGGGATACTCTTCCTAGAGCACAGCAGCTCCAGCGAGAGCGAAAAG
ATTAAGGCGTGGCACCCGCCCACGGAAGCTACGGGTGCGTCGGCGGACAA
TACAGCAAAAGGTGATGTCATCTCGAAGGACTCTGTATCACCACGAATCT
CGGTCGGACAAAGCGACTTTAATCTCTTTCCAAGCGATGTAAGCAGCCGC
CTTCCCGTCCTCACCGATGGAGCGGAGAAGCGGTCGACCGAGTCATGTCT
TGGAAGCATACGCACGACTTCTGCGGGGGTCACTAGCGCCGTGAATGAAG
AACGTCCCGCAAGCCGGGTGGTGGGTGAGGCCAGAGACGAGGCTTCTAAA
GGGCGCAGCCGGAGTCGTATCCCCGCGCTCACGTGGCTTCATCCTATGTC
CGGAGCTGGCCTCTGTCGCTCGAGCCAGCCCTTGGCGGGGTTCAGGCTGA
ACCCGTCCTTGCTGGATGACGAGAAGCTGCTTAATGCGATAAGAGCGACC
GTGGATTCACCCCCTGATAATCATGTTTGCTCTGGTACAGTATCGACGAG
CGGGAGCAAGAGTTCTTCTTCCGTCGCGACCGACGCCTGCGCCGAGGAAA
AAGCCTCCTACGGTGATCACGCCGAACCGTCGCCTACACATGAGGTACTC
GAGCATTCGCGCACGAGGATGTGGAACAGCGACGAAGGGTCTCTCGAGAG
CTGTGCTGGAAGTTGCGTTGACCAAGGCGTAGCTGGAGCAGAGGCAAGGC
AAGAAGGCGGGGCACTGCAGGGAAAGCCGATCATCGTGAAGGCAAAACGC
AATATCGAGGACGAGGGTAGTTACAAAACGGCTTGTGGAGCTGGAATAGT
CGTGGGAGTGGACGAGTTCCGCGGTAAACCACGTTCGAGAGGCTCCCGCG
ACGAGGGGCGGGGAAACGAGGGTTCTCTAGCCGATACCAAAAGCCGCCAA
GGGATACTCTTCCTAGAGCACAGCAGCTCCAGCGAGAGCGAAAAGATTAA
GGCGTGGCACCCGCCCACGGAAGCTACGGGTGCGTCGGCGGACAATACAG
CAAAAGGTGATGTCATCTCGAAGGACTCTGTATCACCACGAATCTCGGTC
GGACAAAGCGACTTTAATCTCTTTCCAAGCGATGTAAGCAGCCGCCTTCC
CGTCCTCACCGATGGAGCGGAGAAGCGGTCGACCGAGTCATGTCTTGGAA
GCATACGCACGACTTCTGCGGGGGTCACTAGCGCCGTGAATGAAGAACGT
CCCGCAAGCCGGGTGGTGGGTGAGGCCAGAGACGAGCCTAGACCCGGCGG
GGAGCACATAGCCGTGCTTCGAATTATGGACGCTCGGTCCGTGCTTTCGG
CAAACGCCCACCGATTCTTGGGCAAGGGCTACGAGAACATCGCGCGACTG
GGCGGGGACGGGCGTGCGTCAATAACTTTCTTGGATATCCCGAACGCCCA
TGCAGTGCAGCAGAATTTCAACGCACTGGTGGAGACGTGCCGCACGCAGG
AGGACAACCCTGCTCGGCTCGTTCACATGCACCCTAGACCCGGCGGGGAG
CACATAGCCGTGCTTCGAATTATGGACGCTCGGTCCGTGCTTTCGGCAAA
CGCCCACCGATTCTTGGGCAAGGGCTACGAGAACATCGCGCGACTGGGCG
GGGACGGGCGTGCGTCAATAACTTTCTTGGATATCCCGAACGCCCATGCA
GTGCAGCAGAATTTCAACGCACTGGTGGAGACGTGCCGCACGCAGGAGGA
CAACCCTGCTCGGCTCGTTCACATGCACGGCTTGCGTTGGATGGAGAATA
TTAGCGCGCTGCTCAAGGGAGCCTCGCGCGTGTGCGCATACCTTGAGGCC
GGGGATCCGGTGCTTGTGCACTGCAGTGACGGCTGGGACCGAACGCCTCA
GCTGACTTCCTTGGCGCAGTTACTACTGGACCCATACTACCGCACTATTG
AAGGGTTTCAGGGCTTGCGTTGGATGGAGAATATTAGCGCGCTGCTCAAG
GGAGCCTCGCGCGTGTGCGCATACCTTGAGGCCGGGGATCCGGTGCTTGT
GCACTGCAGTGACGGCTGGGACCGAACGCCTCAGCTGACTTCCTTGGCGC
AGTTACTACTGGACCCATACTACCGCACTATTGAAGGGTTTCAGGTGTTG
GTGGAGAAGGACTGGTGCAGTTTTGGCCACCGTTTCGCTACCCGGGGCGG
ATACGGACACAACCCCAACTCACGCACGTCGCCGATATTTCCGCAGTTTC
TGGACGCGACGTACCAGCTTTTGCGGCAATTTCCCACATCCTTCGAGTTC
TCGGAGAACCTCCTGCTCCTTCTCGTACACGCCTTCTGCTCCAGGCGAGT
GTTGGTGGAGAAGGACTGGTGCAGTTTTGGCCACCGTTTCGCTACCCGGG
GCGGATACGGACACAACCCCAACTCACGCACGTCGCCGATATTTCCGCAG
TTTCTGGACGCGACGTACCAGCTTTTGCGGCAATTTCCCACATCCTTCGA
GTTCTCGGAGAACCTCCTGCTCCTTCTCGTACACGCCTTCTGCTCCAGGC
GA
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