prot_F-serratus_M_contig848.19871.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig848.19871.1
Unique Nameprot_F-serratus_M_contig848.19871.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length308
Homology
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BLAST of mRNA_F-serratus_M_contig848.19871.1 vs. uniprot
Match: D8LL68_ECTSI (Rab geranylgeranyl transferase component A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LL68_ECTSI)

HSP 1 Score: 272 bits (696), Expect = 2.370e-87
Identity = 145/285 (50.88%), Postives = 189/285 (66.32%), Query Frame = 0 
Query:   23 ARFEEDTDSFRLRRRKFGFAGIPAVVLRQDFLCVEGTGGAVWRSSIRFAEFVCSQEGRRSLPITGKSVLEISSGLGLGAIVAWHLGASPLVATDIDSEHGPLRLLEENIRENCGQLGARADRPISTSCSSSKNQHQQKQEGQELGSSTSPPLIEPKEHTSERDAVSGAQGPSIPPSPRPLVRTLRWGNRAQLLEAVASLEGHGPDIVFACDVVFDEAMLPALTRTLLDACALRTRNGGRPILCVSHQRRNRAREEAFFADVSSHLGQGLE---VHRDEDVSIFLF 304
            A FE DT+SF LRRR+F F G+P VVL QDF+ VEGTGGAVWR SI F+EFVCS+EGRR LP+ GKSVLEISSGLGLGAIV+W+LGASP+VATD+ S+ GP+ LL  N+ ENCG       R ++T   S     +    G E G+S        K  ++E +                 V++LRWG++AQL +A+   +G GPD++ ACDVVFD+A+LP L  TL +A    TR GGRP LCVSHQ+RNR RE+ FFA ++  +G G +   +H+  D+S+F+F
Sbjct:   20 ACFERDTESFMLRRRRFMFPGLPPVVLNQDFVSVEGTGGAVWRPSIEFSEFVCSEEGRRCLPLAGKSVLEISSGLGLGAIVSWNLGASPVVATDLGSKDGPMTLLARNVSENCGP------RAVATPQPSPGRTSRDHSRGGEAGTSA-------KGRSAEDEGTPXXXXXXXXXXXXXSVQSLRWGDKAQLADALKKFDGFGPDVLLACDVVFDDALLPPLLETLAEAACRTTRGGGRPSLCVSHQKRNRRREDNFFASLAKRIGGGGQFRMLHQQNDLSVFVF 291
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig848.19871.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LL68_ECTSI2.370e-8750.88Rab geranylgeranyl transferase component A n=2 Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019410Lysine methyltransferasePFAMPF10294Methyltransf_16coord: 56..134
e-value: 2.9E-4
score: 20.6
coord: 203..285
e-value: 2.0E-5
score: 24.4
NoneNo IPR availableGENE3D3.40.50.150coord: 55..300
e-value: 1.4E-32
score: 115.1
NoneNo IPR availablePANTHERPTHR14614HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGENcoord: 47..286
IPR029063S-adenosyl-L-methionine-dependent methyltransferaseSUPERFAMILY53335S-adenosyl-L-methionine-dependent methyltransferasescoord: 80..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig848contigF-serratus_M_contig848:249081..257419 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig848.19871.1mRNA_F-serratus_M_contig848.19871.1Fucus serratus malemRNAF-serratus_M_contig848 248557..257767 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig848.19871.1 ID=prot_F-serratus_M_contig848.19871.1|Name=mRNA_F-serratus_M_contig848.19871.1|organism=Fucus serratus male|type=polypeptide|length=308bp
MPLATGLTANGPWWSADGEGEEARFEEDTDSFRLRRRKFGFAGIPAVVLR
QDFLCVEGTGGAVWRSSIRFAEFVCSQEGRRSLPITGKSVLEISSGLGLG
AIVAWHLGASPLVATDIDSEHGPLRLLEENIRENCGQLGARADRPISTSC
SSSKNQHQQKQEGQELGSSTSPPLIEPKEHTSERDAVSGAQGPSIPPSPR
PLVRTLRWGNRAQLLEAVASLEGHGPDIVFACDVVFDEAMLPALTRTLLD
ACALRTRNGGRPILCVSHQRRNRAREEAFFADVSSHLGQGLEVHRDEDVS
IFLFRCV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019410Methyltransf_16
IPR029063SAM-dependent_MTases