prot_F-serratus_M_contig848.19869.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig848.19869.1
Unique Nameprot_F-serratus_M_contig848.19869.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length171
Homology
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BLAST of mRNA_F-serratus_M_contig848.19869.1 vs. uniprot
Match: D8LL70_ECTSI (DUF4524 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL70_ECTSI)

HSP 1 Score: 134 bits (336), Expect = 3.870e-33
Identity = 86/178 (48.31%), Postives = 103/178 (57.87%), Query Frame = 0 
Query:   22 EPSRLLLYENGASLGVFPPALGGNDHEVTLP------SVIVMEPEGACFTHIRQDGTCYRLLTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLHVD-----KSFQGTS-----------TPPPSRRLSRLALWPE------RPPSSGNSKRCTVH-ADGRVEVRAAGGNARLVLSSS 170
            EP R LL+ENGA+L VF       DH           S +V+EP GACF  +RQDGTC+R L+DFCRRDL+P +AAV++FRNAHS RPYLS+R+H        S  GT            TP      SR+A WP       R  +S +S    V  ADG VEVRAAGGNARL LS+S
Sbjct:    3 EPRRCLLFENGAALAVFG---DDGDHHTRQSGDERGNSAVVLEPSGACFAEVRQDGTCHRQLSDFCRRDLIPHVAAVSSFRNAHSPRPYLSQRIHATLEQETHSSNGTXXXXXXXXXXXXTP------SRIAHWPAAAEPTCRHSTSNSSSTFVVRGADGSVEVRAAGGNARLALSAS 171
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BLAST of mRNA_F-serratus_M_contig848.19869.1 vs. uniprot
Match: A0A6H5KVD6_9PHAE (DUF4524 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVD6_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.000e-32
Identity = 85/187 (45.45%), Postives = 107/187 (57.22%), Query Frame = 0 
Query:    8 LLRVRIPLSSYNWMEPSRLLLYENGASLGVFPPALGGNDHEVTLPS-------VIVMEPEGACFTHIRQDGTCYRLLTDFCRRDLLPQLAAVANFRNAHSSRPYLSRRLH--VDKSFQGTSTPPPSRRL--------SRLALWPERPPSSGN-------SKRCTVHADGRVEVRAAGGNARLVLSSS 170
            LL+ R+  S     EP R LL+ENGA+L VF     G+ H  T  S        +V+EP GACFT +RQDGTC+R L+DFCRRDL+P +AA ++FRNAHS RPYLS+R+H  +++    +S                SR+A WP               S      ADGRVEVRAAGGNARL LS+S
Sbjct:    7 LLQKRVRRSEREMTEPLRYLLFENGAALAVFGDR--GDYHTSTRQSRNERGNSAVVLEPSGACFTQVRQDGTCHRQLSDFCRRDLIPHVAAASSFRNAHSPRPYLSQRIHATLEQGPHNSSXXXXXXXXXXXXXXXPSRIAHWPAAAEPXXXXXXXXXXSTFVVRGADGRVEVRAAGGNARLTLSAS 191
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig848.19869.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LL70_ECTSI3.870e-3348.31DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
A0A6H5KVD6_9PHAE1.000e-3245.45DUF4524 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027830Domain of unknown function DUF4524PFAMPF15025DUF4524coord: 52..170
e-value: 1.2E-22
score: 80.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig848contigF-serratus_M_contig848:233700..244764 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig848.19869.1mRNA_F-serratus_M_contig848.19869.1Fucus serratus malemRNAF-serratus_M_contig848 233700..244764 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig848.19869.1 ID=prot_F-serratus_M_contig848.19869.1|Name=mRNA_F-serratus_M_contig848.19869.1|organism=Fucus serratus male|type=polypeptide|length=171bp
DAQPHRTLLRVRIPLSSYNWMEPSRLLLYENGASLGVFPPALGGNDHEVT
LPSVIVMEPEGACFTHIRQDGTCYRLLTDFCRRDLLPQLAAVANFRNAHS
SRPYLSRRLHVDKSFQGTSTPPPSRRLSRLALWPERPPSSGNSKRCTVHA
DGRVEVRAAGGNARLVLSSSR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027830DUF4524