prot_F-serratus_M_contig848.19875.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig848.19875.1
Unique Nameprot_F-serratus_M_contig848.19875.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length168
Homology
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BLAST of mRNA_F-serratus_M_contig848.19875.1 vs. uniprot
Match: UPI0019D64B3C (uncharacterized protein LOC120651961 n=1 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D64B3C)

HSP 1 Score: 54.7 bits (130), Expect = 1.150e-5
Identity = 34/75 (45.33%), Postives = 48/75 (64.00%), Query Frame = 0 
Query:   25 LLQGSNDDKLGKYDVNNAATEFACSRYQILRVWKRYKQQKADGVDIDLRNRRFQNSGRKGMDTEKILEILETVPL 99
            LL+ SN  KL K   N  A  F  SRYQ+  VW+R KQ +A G  +D+R+RR +N GR+ + T+ +L++L  VPL
Sbjct:  199 LLERSNRGKLKKNSTNIVAQLFQVSRYQVRAVWRRVKQCRAQGRQVDVRSRR-KNCGRERIQTD-LLDVLR-VPL 270
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig848.19875.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0019D64B3C1.150e-545.33uncharacterized protein LOC120651961 n=1 Tax=Panic... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33889FAMILY NOT NAMEDcoord: 10..99
NoneNo IPR availablePANTHERPTHR33889:SF6coord: 10..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig848contigF-serratus_M_contig848:343174..343677 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig848.19875.1mRNA_F-serratus_M_contig848.19875.1Fucus serratus malemRNAF-serratus_M_contig848 343089..343678 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig848.19875.1 ID=prot_F-serratus_M_contig848.19875.1|Name=mRNA_F-serratus_M_contig848.19875.1|organism=Fucus serratus male|type=polypeptide|length=168bp
MPVSGSAREIVPRNNLNEKQKSMPLLQGSNDDKLGKYDVNNAATEFACSR
YQILRVWKRYKQQKADGVDIDLRNRRFQNSGRKGMDTEKILEILETVPLK
YVPSTKKSFVPKKIIFASFRLYLNRAYIYCFTNRAYNRCRTYCAPLSQLL
YKYWLCSLALNTAVALV*
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