mRNA_F-serratus_M_contig847.19855.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig847.19855.1
Unique NamemRNA_F-serratus_M_contig847.19855.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: D7FIB5_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB5_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 3.020e-74
Identity = 142/260 (54.62%), Postives = 164/260 (63.08%), Query Frame = 1
Query:    1 NLELVNPSKVLHLFGMGLNCVPTPVLRSTSLVRLDLAYNQLPAVPASIASLTNLEHLWLQGNPIESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRILEARKSLFLLWIDLRGAPMKAKMKRFQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYREVVDYPAGRHLLPLVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEG 780
            +LE VN SKVLHL GMGL+ +P PVLRS  L RLDLA N+LP+VPA+I+SLTNLE                                                                GAP+KAKMK FQR+T  LM YLRERDARK IK +L+NKLS  LYREV+D P GRH+ PL+KAVC +F D++ELTQVARHCDRLFP DLA    DP AAA+++R KFT L +K ERKRLAS+LELKMRAIYYDVIDPAAVEG
Sbjct:    5 DLEQVNRSKVLHLTGMGLSRIPRPVLRSVGLTRLDLACNELPSVPAAISSLTNLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXGAPLKAKMKFFQRNTKGLMAYLRERDARKHIKVELYNKLSTGLYREVLDSPTGRHIHPLIKAVCLAFNDLQELTQVARHCDRLFPEDLATGGIDPTAAASTLREKFTVLGRKNERKRLASQLELKMRAIYYDVIDPAAVEG 251          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: A0A7S2RGP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGP1_9STRA)

HSP 1 Score: 170 bits (430), Expect = 5.080e-45
Identity = 114/268 (42.54%), Postives = 156/268 (58.21%), Query Frame = 1
Query:    7 ELVNPSKVLHLFGMGLNCVPTPVLR-STSLVRLDLAYNQLPAVPASIASLTNLEHLWLQGNP-IESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRILEARKSLFLLWID-------LRGAPMKAKMKRFQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYREVVDYPAGRHLLP-LVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEG 780
            E    ++VLHL    L  +P  V     SL+RLDL  N L  +PA +ASL  LE LWL  NP +  +  D+  C +L+     LD+R TAL  LP+E+GRL  +LE      +L  D       LRG    AK  R   DT  L+  L  +D R+ +K +L +K+S  +YRE  D P G+ L+P LV+AV   F D+ EL  V R+CDRLFP +L+   +  + AA  ++ KF  LR++  RK+L++ELELK+RAIYYDVI+P  VEG
Sbjct:   25 EQARKTRVLHLGNRFLRLIPQDVWSLGASLLRLDLGCNNLTRLPAEVASLPALEQLWLNDNPGLVELCPDLDKCKKLRE----LDVRRTALATLPKELGRLTHLLE------ILLEDTPFQQQVLRGDQGGAKRGRVL-DTEELVAELERQDRRESLKQNLQDKISGGIYREEADSPEGQELIPALVEAVSIEFSDLDELRNVVRNCDRLFPAELSAARN-ARRAARRLKEKFVTLRRENARKKLSTELELKLRAIYYDVIEPTEVEG 280          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: A0A7S2BKK2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKK2_9STRA)

HSP 1 Score: 163 bits (413), Expect = 3.000e-43
Identity = 96/228 (42.11%), Postives = 142/228 (62.28%), Query Frame = 1
Query:  106 LAYNQLPAVPASIASLTNLEHLWLQGNPIE-SIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRILEARKSLFLLWIDLRGAPM-KAKMKRFQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYREVVDYPAGRHLLPL-VKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEG 780
            L++N+L  +  +I +LT LE LWL  NP+  ++  +I+ C RL+    V+DLR T +  +P E+GRL R++          IDLR  P  K      + DT  LM  L E+D R+  +  +  K+S+ +YRE  D  AG+HL+ L V AVCR F D+ +L  V R+CDRLFPP+L+    DP+ +A  ++ +F  LR++ E+K+L++ELE+K+RAIYYDVI P  VEG
Sbjct:    1 LSFNKLERLSPAIKALTGLEQLWLNDNPLFIALPPEIEFCKRLE----VMDLRRTRISDVPSEIGRLQRLIS---------IDLRDTPFAKDNCVSGEVDTKGLMATLAEKDTRESYREQMVKKVSSGVYREKSDSEAGKHLIGLLVSAVCRQFEDLDDLRNVVRNCDRLFPPELSKVERDPERSAKKIQDRFLQLRRENEKKQLSAELEIKLRAIYYDVIAPEKVEG 215          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: A0A2R5GQ24_9STRA (Leucine-rich repeat protein lrrA n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GQ24_9STRA)

HSP 1 Score: 124 bits (310), Expect = 1.380e-27
Identity = 99/332 (29.82%), Postives = 156/332 (46.99%), Query Frame = 1
Query:    4 LELVNPSKVLHLFGMGLNCVPTPVLRS---TSLVRLDLAYNQLPAVPASIASLTNLEHLWLQGNP-IESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRILEARKSLFLLWIDLRGAP-MKAKMK--------------------------------------------------------RFQRDTVPLM-----------EYLRERDARKQIKTDLFNKLSASLYREVVDYPAGR-HLLPLVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEG 780
            ++    S+ LHL   GL+ +   ++ S   + LVRLD+ +N L  +P  +A L  LE LW+  NP + S+ +D+ HC RL+    V+D R T+LR LP  +G LP ++          IDLRG   +K+K+                                                         R Q    PL+            YL  R   K++K  L  KL + LYR++ +  AGR  ++ L+K V + F + +    V R+CDRLFP  +A      +A    +R++  +L+++ ERK+LA++LEL++RA+Y+D I+PA VEG
Sbjct:   64 VQQAKTSRTLHLAFFGLSRLEEKLILSPALSGLVRLDVGHNDLETLPKEVAKLARLEQLWVNDNPRLSSLPSDLTHCHRLR----VVDARRTSLRNLPAGLGTLPNLIA---------IDLRGIEVLKSKLVQAYVPPHDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSASTLRSGGTLTECRPQHAETPLLAEVIARTRGLKSYLLRRQEIKELKGKLREKLCSGLYRDLSETEAGRVKVVALIKEVSKVFPEPETFADVIRNCDRLFPDRIA------RADVRKIRQEIDSLKRQNERKKLAAKLELRLRALYFDRINPALVEG 376          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: K3X410_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X410_GLOUD)

HSP 1 Score: 117 bits (294), Expect = 6.620e-26
Identity = 94/280 (33.57%), Postives = 142/280 (50.71%), Query Frame = 1
Query:   28 VLHLFGMGLNCVP-----TPVLRSTSLVRLDLAYNQLPAVPASIASLTNLEHLWLQGNP-IESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRILEARKSLFLLWIDLRGAPMKAKMKRFQRDTVP--------------------LMEYLRERDARKQIKTDLFNKLSASLYR-EVVDYPAGRHLLPLVKAVCRSFVDVKELTQVARHCDRLFP-PD-LAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEG 780
            +LHL    L   P     TP L STSL RLDL++N L ++P +I +L  L+ LWL  NP + S+ A + +C+ L+    VLD+  TA+  LP E GRL          ++  +D+   P++ +  +    T                      LM  LR +D R Q+K  LF KL   +YR E  D  +   L  +++ V + F    EL  + R+ +RLFP PD + G +    A    +RR + ALR   +R + A++LE+K+R++Y+D IDP  VEG
Sbjct:   11 LLHLSQCHLQLCPSALFATPEL-STSLFRLDLSFNLLESIPDAIGNLIKLQVLWLSHNPRLASLPAALTNCSNLQ----VLDVNSTAIHALPYEYGRLQ---------YVKVLDIGSTPLEKRWIKKNHLTATSGNDDDEPNDLITTATRCQELMTQLRRKDERAQLKHALFEKLHDEVYRMECADTASATALRRMLQRVLKHFPLADELRSLIRNAERLFPSPDFMRGITVLENADPVEMRRTYEALRDTNDRNKRAADLEIKIRSLYFDRIDPTTVEG 276          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: A0A1V9Z845_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z845_9STRA)

HSP 1 Score: 106 bits (265), Expect = 6.540e-22
Identity = 82/267 (30.71%), Postives = 124/267 (46.44%), Query Frame = 1
Query:    4 LELVNPSKVLHLFGMGLNCVPTPVLRS--TSLVRLDLAYNQLPAVPASIASLTNLEHLWLQGNPIESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRI-----LEARKSLFLLWIDLRGAPMKAKMKR-FQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYREVVDYPAGRHLLP-LVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVE 777
            LE    + +LHL   GL  VP  + R   TSL RLDL +N++ A+P +I  LT+LE LW+                                                  L+A+       + +   P KA  K+  Q   V +++YL  +D R+Q K  L  KL    YRE  D   G + +  L+K   + F    ++  + R+ +RLFPP+L   S+D    A ++R  F  L+++ ++K+LA+ELELK+R IY+D IDP  VE
Sbjct:    8 LEEAKQTGLLHLVQFGLRSVPADLFRLNFTSLYRLDLGFNEIRALPDAIGLLTSLEFLWVNDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDNVPLDAK-------LQVAAQPPKASTKKQAQAVCVSVLKYLHRKDVRRQQKQILLEKLKDGPYRESADSNDGINRIERLMKRALKEFPTEDDVQSLIRNLERLFPPNLVAASNDTGVTAVAMRTHFVQLKQENQKKKLAAELELKIRNIYFDRIDPVTVE 267          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: A0A7S2UUH4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.280e-21
Identity = 58/130 (44.62%), Postives = 85/130 (65.38%), Query Frame = 3
Query:  780 YIASIYRQQVEPLEDIQFIVRRASKILPPNSDDITGVGIERSMLALQKEMTDDRQRCVDGLFEALSHLYSDQEPSKVLDLTQNVAAVFGRGKRFAEGNELEELKQLRADAERFFPSEIQEAEPIRVRTLF 1169
            YI  IY    + +ED+QF+++ A  +LPPN++DI G  ++++ML LQ E+T  R+   + LF++LS +YSD+EPS+V +L   VA +F R +RF    E EELK+L ADA   FP+E Q A P  +R  F
Sbjct:  301 YIRDIYDHMTQ-VEDVQFLIKYAPSLLPPNAEDIDGAEVKQAMLRLQDELTAARKAVEENLFQSLSSVYSDREPSQVRELMLGVAKLFQR-ERFCTKKEEEELKKLSADAPMLFPAEFQAANPEEIRKEF 428          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: A0A6A3SDQ9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SDQ9_9STRA)

HSP 1 Score: 105 bits (262), Expect = 2.800e-21
Identity = 92/312 (29.49%), Postives = 151/312 (48.40%), Query Frame = 1
Query:    4 LELVNPSKVLHLFGMGLNCVPTPVLRSTS-----------------LVRLDLAYNQLP---AVPASIASLTNLEHLWLQGNP-IESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLP--RILEARKSLFLLWIDLRG---------------------------APMKAKMKRFQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYR-EVVD--YPAGRHLLPLVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEG 780
            +E    + +LHL    L  VP  +  S S                 LVRLDL++NQL    A+P +I SLT L  L++  NP +E + + + +CT+L+    VLD+  +AL++LP+E+GRL   R++    +      +++G                             M + +K+       ++  LR +D R+Q+K +LF+ L    YR E  D    A   L   +  V + F    ++  + R+ +RLFP + +  + + +  A  +RR+F  LR   ERK+ A++LELK+R +Y+D IDP  VEG
Sbjct:   10 VEGAKKNGMLHLIQYQLRHVPPELFASASSGPASSSSASPGGLADTLVRLDLSFNQLEGPQAIPDAIGSLTVLRELYVNNNPRLEQLPSTLVNCTKLQ----VLDVSSSALKELPQELGRLQHLRVINIDDTPLQRRWEVKGHLVRRNEDDEPIIFSFENNDTNAQTALTTMSSPIKKVPTPCQQILRKLRRKDEREQLKLELFDLLRDKTYRLERHDDSVAASAVLHTALHRVLKLFPQAVDVRSLLRNAERLFPQEFSIEAFE-RLDATRIRREFDVLRTTTERKKRAADLELKIRNLYFDRIDPTTVEG 316          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: G4Z229_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4Z229_PHYSP)

HSP 1 Score: 102 bits (253), Expect = 2.020e-20
Identity = 93/303 (30.69%), Postives = 143/303 (47.19%), Query Frame = 1
Query:   28 VLHLFGMGLNCVPTPVLRSTS--------------LVRLDLAYNQLP---AVPASIASLTNLEHLWLQGNP-IESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRIL-------------EARKSL-----------FLLWIDLRGAPM-------KAKMKRFQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYR---EVVDYPAGRHLLPLVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEG 780
            +LHL    L  VP  +  S S              LVRLDL++NQL    A+P +I SLT L  L++  NP +E + + + +C +L+    VLD   +AL  LP+E+GRL  +              EA+  L           F    +   AP         +K K  Q     ++  LR +D R+Q+K +LF+ L    YR         A   L   +  V + F    ++  + R+ +RLFP + +  + + +  A+ +RR+F  LR   ERK+ A++LELK+R +Y+D IDP  VEG
Sbjct:   18 MLHLIQYQLTHVPPELFVSASSGPSSASPGELAGTLVRLDLSFNQLEGSQAIPDAIGSLTALRELYVNNNPRLEQLPSTLGNCIKLQ----VLDASSSALNSLPQELGRLQHLRVINIDDTPLQRRWEAKGHLVQRNEDDDPLTFSFENNDNNAPTVSTTISSPSKTKTIQTPCQQILRKLRLKDEREQLKLELFDLLRDKTYRLERHEDSVAASAVLCTALHRVLKLFPQAIDVRSLLRNAERLFPQEFSIETFE-KLDASRIRREFDVLRTATERKKRAADLELKIRNLYFDRIDPMTVEG 315          
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Match: T0SAD5_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0SAD5_SAPDV)

HSP 1 Score: 100 bits (250), Expect = 2.310e-20
Identity = 79/272 (29.04%), Postives = 116/272 (42.65%), Query Frame = 1
Query:    4 LELVNPSKVLHLFGMGLNCVPTPVLRS--TSLVRLDLAYNQLPAVPASIASLTNLEHLWLQGNPIESIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRILEARKSLFLLWIDLRGAPMKAKM-----------KRFQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYREVVDYPAGRHLLP-LVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQAAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVE 777
            LE    + +LHL  + L  VP+ + R   ++L RLDL +N +  +P +I  L  LE LWL                                                              P+ AK+           K+ Q     ++ YL  +D R+Q K  LF KL    YRE  D   G   +  L+K   + F    ++  + R+ +RLFPP+L   SD P A A ++R  F  L++  ++K+LA+ELELK+R IY+D IDP AVE
Sbjct:    8 LEEAKQTGLLHLVQLNLRAVPSDLFRLNFSALYRLDLGFNHVRVLPDAIGQLAALEFLWLNDXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXXXVPLAAKLLAATQVVGKSEKQAQAVCASVLRYLHRKDVRRQQKQILFEKLKDGPYRESADTNDGMERIHRLMKRAIKEFPTEDDVQSLIRNLERLFPPNLITASDHPSATATAMRAHFVQLKQDNQKKKLAAELELKIRNIYFDRIDPVAVE 266          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig847.19855.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB5_ECTSI3.020e-7454.62Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A7S2RGP1_9STRA5.080e-4542.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2BKK2_9STRA3.000e-4342.11Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A2R5GQ24_9STRA1.380e-2729.82Leucine-rich repeat protein lrrA n=1 Tax=Hondaea f... [more]
K3X410_GLOUD6.620e-2633.57Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A1V9Z845_9STRA6.540e-2230.71Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A7S2UUH4_9STRA1.280e-2144.62Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6A3SDQ9_9STRA2.800e-2129.49Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]
G4Z229_PHYSP2.020e-2030.69Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
T0SAD5_SAPDV2.310e-2029.04Uncharacterized protein n=1 Tax=Saprolegnia diclin... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig847contigF-serratus_M_contig847:336731..352063 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score225.7
Seed ortholog evalue2.4e-56
Seed eggNOG ortholog2880.D7FIB5
Preferred nameLRCH1
KEGG koko:K09506,ko:K10641
Hectar predicted targeting categoryother localisation
GOsGO:0002682,GO:0002683,GO:0002685,GO:0002686,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0010033,GO:0016020,GO:0023052,GO:0030334,GO:0030336,GO:0032879,GO:0034097,GO:0034260,GO:0040012,GO:0040013,GO:0042221,GO:0043086,GO:0043087,GO:0044092,GO:0044424,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051270,GO:0051271,GO:0051336,GO:0051346,GO:0051716,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071345,GO:0071944,GO:1990868,GO:1990869,GO:2000145,GO:2000146,GO:2000401,GO:2000402,GO:2000404,GO:2000405
EggNOG free text desc.regulation of response to stimulus
EggNOG OGsCOG4886@1,KOG0619@2759
EC2.3.2.27
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03009,ko03110,ko04121,ko04131
Exons9
Model size1175
Cds size741
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932495.22248-UTR-F-serratus_M_contig847:336730..3367751622932495.22248-UTR-F-serratus_M_contig847:336730..336775Fucus serratus maleUTRF-serratus_M_contig847 336731..336775 +
1690964336.238278-UTR-F-serratus_M_contig847:336730..3367751690964336.238278-UTR-F-serratus_M_contig847:336730..336775Fucus serratus maleUTRF-serratus_M_contig847 336731..336775 +
1622932495.3769703-UTR-F-serratus_M_contig847:350054..3500711622932495.3769703-UTR-F-serratus_M_contig847:350054..350071Fucus serratus maleUTRF-serratus_M_contig847 350055..350071 +
1690964336.3329248-UTR-F-serratus_M_contig847:350054..3500711690964336.3329248-UTR-F-serratus_M_contig847:350054..350071Fucus serratus maleUTRF-serratus_M_contig847 350055..350071 +
1622932495.393023-UTR-F-serratus_M_contig847:350446..3505891622932495.393023-UTR-F-serratus_M_contig847:350446..350589Fucus serratus maleUTRF-serratus_M_contig847 350447..350589 +
1690964336.3552444-UTR-F-serratus_M_contig847:350446..3505891690964336.3552444-UTR-F-serratus_M_contig847:350446..350589Fucus serratus maleUTRF-serratus_M_contig847 350447..350589 +
1622932495.4108124-UTR-F-serratus_M_contig847:351104..3512701622932495.4108124-UTR-F-serratus_M_contig847:351104..351270Fucus serratus maleUTRF-serratus_M_contig847 351105..351270 +
1690964336.3676908-UTR-F-serratus_M_contig847:351104..3512701690964336.3676908-UTR-F-serratus_M_contig847:351104..351270Fucus serratus maleUTRF-serratus_M_contig847 351105..351270 +
1622932495.4300501-UTR-F-serratus_M_contig847:352000..3520631622932495.4300501-UTR-F-serratus_M_contig847:352000..352063Fucus serratus maleUTRF-serratus_M_contig847 352001..352063 +
1690964336.378527-UTR-F-serratus_M_contig847:352000..3520631690964336.378527-UTR-F-serratus_M_contig847:352000..352063Fucus serratus maleUTRF-serratus_M_contig847 352001..352063 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932495.2362185-CDS-F-serratus_M_contig847:336775..3368191622932495.2362185-CDS-F-serratus_M_contig847:336775..336819Fucus serratus maleCDSF-serratus_M_contig847 336776..336819 +
1690964336.2509031-CDS-F-serratus_M_contig847:336775..3368191690964336.2509031-CDS-F-serratus_M_contig847:336775..336819Fucus serratus maleCDSF-serratus_M_contig847 336776..336819 +
1622932495.2588933-CDS-F-serratus_M_contig847:337344..3375011622932495.2588933-CDS-F-serratus_M_contig847:337344..337501Fucus serratus maleCDSF-serratus_M_contig847 337345..337501 +
1690964336.2696023-CDS-F-serratus_M_contig847:337344..3375011690964336.2696023-CDS-F-serratus_M_contig847:337344..337501Fucus serratus maleCDSF-serratus_M_contig847 337345..337501 +
1622932495.2814367-CDS-F-serratus_M_contig847:337917..3380161622932495.2814367-CDS-F-serratus_M_contig847:337917..338016Fucus serratus maleCDSF-serratus_M_contig847 337918..338016 +
1690964336.2808776-CDS-F-serratus_M_contig847:337917..3380161690964336.2808776-CDS-F-serratus_M_contig847:337917..338016Fucus serratus maleCDSF-serratus_M_contig847 337918..338016 +
1622932495.3060756-CDS-F-serratus_M_contig847:347534..3476421622932495.3060756-CDS-F-serratus_M_contig847:347534..347642Fucus serratus maleCDSF-serratus_M_contig847 347535..347642 +
1690964336.2925022-CDS-F-serratus_M_contig847:347534..3476421690964336.2925022-CDS-F-serratus_M_contig847:347534..347642Fucus serratus maleCDSF-serratus_M_contig847 347535..347642 +
1622932495.3294675-CDS-F-serratus_M_contig847:349344..3494691622932495.3294675-CDS-F-serratus_M_contig847:349344..349469Fucus serratus maleCDSF-serratus_M_contig847 349345..349469 +
1690964336.3065557-CDS-F-serratus_M_contig847:349344..3494691690964336.3065557-CDS-F-serratus_M_contig847:349344..349469Fucus serratus maleCDSF-serratus_M_contig847 349345..349469 +
1622932495.3509257-CDS-F-serratus_M_contig847:349846..3500541622932495.3509257-CDS-F-serratus_M_contig847:349846..350054Fucus serratus maleCDSF-serratus_M_contig847 349847..350054 +
1690964336.3209352-CDS-F-serratus_M_contig847:349846..3500541690964336.3209352-CDS-F-serratus_M_contig847:349846..350054Fucus serratus maleCDSF-serratus_M_contig847 349847..350054 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig847.19855.1prot_F-serratus_M_contig847.19855.1Fucus serratus malepolypeptideF-serratus_M_contig847 336776..350054 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig847.19855.1

>prot_F-serratus_M_contig847.19855.1 ID=prot_F-serratus_M_contig847.19855.1|Name=mRNA_F-serratus_M_contig847.19855.1|organism=Fucus serratus male|type=polypeptide|length=247bp
MGLNCVPTPVLRSTSLVRLDLAYNQLPAVPASIASLTNLEHLWLQGNPIE
SIHADIQHCTRLKASLNVLDLRDTALRKLPREMGRLPRILEARKSLFLLW
IDLRGAPMKAKMKRFQRDTVPLMEYLRERDARKQIKTDLFNKLSASLYRE
VVDYPAGRHLLPLVKAVCRSFVDVKELTQVARHCDRLFPPDLAGTSDDPQ
AAAASVRRKFTALRKKIERKRLASELELKMRAIYYDVIDPAAVEGT*
back to top

mRNA from alignment at F-serratus_M_contig847:336731..352063+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig847.19855.1 ID=mRNA_F-serratus_M_contig847.19855.1|Name=mRNA_F-serratus_M_contig847.19855.1|organism=Fucus serratus male|type=mRNA|length=15333bp|location=Sequence derived from alignment at F-serratus_M_contig847:336731..352063+ (Fucus serratus male)
AACTTGGAGCTGGTCAACCCGTCCAAAGTACTCCATCTCTTTGGTATGGG ACTCAACTGCGTACCTACACCAGTCCTCCGAAGCACGAGGTCGGGACCGT TCTAAGGAGCCTTATCCCGTACGATGCGAGTATCTATCCGTCCTTGTTGA AACGATAGACTTCCACCGGACGGGTGTAGGTGCTCCTCGGTGGATTGGAT ACACATTATTTTCTTGAATTAGACTAAACAACGTGCCCTCGGGTACTTTG TAAAGATGGCGGTGTATGTCCATACTGCTACTGTACTGTAAACATATACG ATACGAAATGTTTTTTTGTGGTGGAATTAGGCGCAGAAATTCCTATAAAT AATCGACTCCGCGGGTTGCATTTGAGTGCGTTTCTTGCTGAGCTTCGCGC TCGCTGTGCGAGTCGACACTTTTTTTTTTCACGTCAGAGTGACTCTCTGA GCCAGCGTCATATGAATTTGACGAGGTTAGATATCTGCGCAGTTGCACAA ACATGATGTGACCAATGCATTCAATAATGATGCCAAGAGTACACCGTGAA CAAGCTCCGGAAAGTTGTGCACAATCTACACTGTCCTTCCATTCTGATGA TCTCCGTCACGCAGCTTGGTCAGACTAGACTTGGCATACAATCAGCTTCC CGCAGTGCCTGCATCGATTGCGTCACTAACGAATCTGGAACATCTCTGGC TGCAAGGAAATCCCATCGAAAGCATTCATGCAGATATCCAACACTGCACC CGACTGAAGGCGAGCTTGAACGTTACAAAGTACAACCTTTGAAAAGGCAG CGGCATCCATGTCGTATTCCCTGCGTCCCTCCCCCCATAATGTTTTCGCC GTGCTTGGCGAACAGACGCTGCGGCATTGCGATCTACCCTCTCCGCGAAA GATACGGTGTTAGCTCTGTTGATGCGAAATAAGGCTTAAACATTCACAAA TCTAGTTTGGAAGAGACACATGCGGGATGGGTGCACTATAACACAATAGA AGTGACTTCCTCCGTAACTGCTGGAATGGCGTGGGATCATCGATCACCGA CCAAGCATCAGGGAGTCGTGTGTCTCTTGATCTTTGTAGTATTGAAAACG CACGTCCCATCGGCAATGAAACGCCCCGAATCTGTTTCGTGAAGCACGTA CCACGATTTTGGATCATCTTCACACACATTAAAACAGGTTCTCGACCTGA GAGATACGGCTCTACGGAAGCTACCTCGCGAAATGGGTCGCTTGCCGAGG ATACTCGAGGCAAGGAAATCATTATTTCTTCTGTGGGTCAAGCTTCGTTT GGGTGATGTCGATATTCTTAACAACGTTTCCACGGTATTTCAGCATGCGA GTAGGCTTCGTGACGAGCCGTACCTATTATGCTACCCGTATTTTTCAGTT GTTTTGAAGCGTCGAAAATGAAGACTCGGCACCTTCCACTTTCTTCCCCT GGCTACGTTCCACCAATATGATCTCCTTTAGCGTAGCCTTACGCTAGGCG GGATGGCTGTGGTAAACTGCAGTGAAATTGTTTGATTCGTGCTCGGTACC GAGGCCATAACGCACACTCCGCTGTTAAAGTGTTGAAAGGCGCCTTGTGC TGTTGCGTGTCGATAGAACTTCCCTTCTAGGCAGGAGGTTGGCTGAGCGT GTCGATAGAAAATGATAATTGTGTAAAGAGCTTCAGCAAATAACTCCTGC CTAGAAGGAAAGTTCTATCGATCTCCTTTAGCGTAGCCTTACGCTAGGCG GGATGACTGTGGTAAACTGCAGTGAAATTGTTTGACTCGTGCTCGGTACC GAGGCCATAACGCACACTCCGATGTTAAAGTGTTGAAAGGCGCCTTGTGC TGTTGCGTGTCGATAGAACTTCCCTTCTAGGCAGGAGGTTGGCTGAGCGT GTCGATAGAAAATGATAATTGTGTAAAGAGCTTCAGCAAATAACTCTATT ACGTATGACGACGATGGTGGAGGTCACGAAGGAGGTTTACAAGGCGAAGA TGCTGGAGGATGTCTTCCCTGCCATCAAGGCTCAGTGGCCAGTAGGGCCC GGAGAAGTATTCGTCCAGCAGGACAACGCTCCGGCACACAACATCGCTAA CGACCCGGACATTGTGGCGGCGGGTACTGCTGACGGTTGGAACATCAAGC TGTTGAACCAGCCGCCCAACAGCCCTGACACGAACATCCTGGACTTGGGG TTTTTCAACTCAATTCAGTCCCTCCAGGATCGGACTACGCTCAACACGGT GGACGAGCTCATCGAGGAGGTAAAGAGGGTTTTCACCGAGCAGGAGTCTG AAGCCCTTGGCAGGGTTTGGACGACCTACCAGTCCGTCCTGGAGAAAATC ATGCTGGCGAAAGGCGACAACGACTTCAAGATGCCCCACCTGCACAAGAA GACGGCGAACCGTCGCGGTGCGCCGATTCCGCGTGCCTTGCCGTGCAGCG AGGAGGCGTGGCTTGCGGCTCACGCGTGAACTACGGTACCAGTATGGGAG GGGGGGAGCGCGGTGGGTACCGGTACTGCTGTACCGGTACGAGTGTACCG GTAGTGGTTTTACCACTGTGTTTTGGTGGTTTTGGGATGGAAGAGACTGC CGTAGAGGCGTTAACGGGAGTGGTGGCGCGTGTCGCCGGTGACGCGCTTA AGTTAATGAAAAAAAAATTAAAAATGCCTCATGGCCAAAATTTATGAAAA ATGTGAAAACCCCGGGGATGGTATCCAGGCATCCCCTGGCCACCCCGGGG ATTTTTTACTACTTACCCCCCCAGAAATTCATGCTGCCCCGTTTATATGC TGTTCCCACACTAAAATCGACTGTTTTGACATGTGGCTTATATTTGGAGT CGCGGAGATGTGGCTTATATTTTGTGTTAAAGTGTTGAAAAGCGCCTTGT GCTGTTGCGTGTCGATAGAACTTCCCTTCTAGGCAGGAGGTTGGCTGAGC GTGTCGATAGAAAATGATAATTGTGTAAAGAGCTTCAGCAAATAACTCTA TTACGTATTATCACTAGTACCACGGACTTGATGAAAGTGAACACGAGGGG CTTGCCTCAGCTGCGCCGCTGCACAAAGCTATTAATAGTACCCTTACCAA CTAGCTAATCAGACGCAAGCTTTTCTTTAGGCGAATTACTTATTTCATTT TTACTAATGATATGCGGCATTAGCAGTCGTTTCCAACTGTTATTTCCCTC CTAAAGGTAAATTCTTACGTGTTACTCACCCGTCCGCCACTAAAGTTAAA AACTTTCGTACGACTTGCATGTGTAAAGCATACCGCCAGCGTTCATCCTG AGCCAGGATCAAACTCTCGATAGTTTCCTGAGTTCTTAAATTTATAACCT AGTTAAAAACTCTTATACAACTTGCATGTGTAAAGCATACCGCCAGCGTT CATCCTGAGCCAGGATAAAACTCTCGATAGTTTCCTGAATATTTAAGAAA ATAAATTATAAGTCCTTCAATTCATAACCTATTCTCTTCTTTAAATGAAG AAATATGTTTTTACCCTAGGTTAAATATTACTCTCAAGAAGAATTGTCAA GCTCTACAAATGCTGTAGTCATTTTAAATTTTATTTGTTATCAGATAACT TTTTTATTAGCTTTAGTAAAATCTTTAACTTAAACTAAATACGCTACTTT TTGTAATATCTTGTTCAATAATTGTAACTAAATCTGCTTTAGTTAATAAA CGACCACTATTATCAAAATTACAATTTGCTTGTCTCATCCTAGCACGATC CAAAGCATTTCTAATGCTTCGAGCATTAGCAAATAAAGGTTGTTCACGAC GTTTTATGATATACTCCAAAAAAACATCTTCTGCTGAAGGAGAAAATTCA TATTGTTGTTCTTCTAACATAATTTTACCAATAATTAATAATTGGGTGCA GTCATTCGTCGCCCGAGTGGTCTAGTAGGTAACCTGCACACCTGCTAGTG CGGAAGTCGTGAGTTCGATTCTTACCAAAGTAGAACCGTGTTCTTTCTTT CGTAACGGAAAGCGTGGGAACGTGAGTAAGTCAAATTCAACCATCGGTTA ACGAGTTGTAAGAGTGCTGAACTTGCATCGCGATAAAAATTCGCAAGGCG TGAACCGGGGAGAGACAGGAAGATCCTTTGTGACCACAGGCAGGATGGTA ATTATGAGATCCATCGGCTATAAGTGTGACTCTCACCACAGAAACATCGA TTGGAACTCCCTTCACAACTTTTTCGGGTTTTGTGGACTCTGAGTTATCA TTCTGTTTCCTACACTGTGGTTCAACCGTATCTGAGTTCCACCTAACACT CCAAGCACAGTGTGCGGGTGCAACATCTTGTTGTGGAAGAGTAACGGTAA CCGTTTCTTTGTATTACGAACTACCGCTAAGTTTTTCGTTGTTGAACGAA TCATGTTGACGGCGCCGCTTTCCCATCTCACATGCGTCGAATCATTTCAA GGTCGGTATTATCTAGACGCGCGTTCAGAAGGAACCCCGCGTGCGTTTTG AAAGCCTTTGCGTACAGCGCTCGCAGTAACACGTTGGCGTTTTGCCCTTT TTACCGTGTCGCGGAGGATGTGGTGCTTGAACGGTTAGTCGCCATCTTAA TGGCTTCTTTGTTGTCTCCACTAATCTTGATGTCGTTGTCGATCGCCAGC GTCATAAACTCCTTCACCTGACAAAGAAAACAGAGCTCATTTGCCGCTAC CGCCAGCACCACGTACTCCGATTCGGACGACGCCGCCGCAGTTACCTTCT GGACCCTCGAGAACCGACTGATCGCGCATCCCCCAACCATCACCGTTCCT CCAGGAACCGAACGCCTTGTTTCGGGGCAAGTGTCGTAGACGGCGTCAAC TTGAGCCGTTAGTTTGGAGTTCAATCCTTGCGCCTCTCGTAGGTGATGCC GGGGTCCCTCTTGAGCCATAGATAATGTTAGGCTCTCTTCGCCGTTTTCC AATGTGCTGATCCCAGGCTGTCGCTAATTTTCTCAAGTTGGTTCGCCGCG TAAGGTCCGGCCGGGTCATGTTTGCAGCCCAAATGAGAGACTCCATCGCC TCCCGGCAAGGAACACCGCGCATCTCTTCGATCTCCGCGTCGGTCTGCGG GCATCGTTTGTGGACAGCGGGTTAGCTCCCGCCGCCGCCGAGGTGGCGCT CGTTTTTTCGACGCCAAACGTCGTAGCCACAGTGTGCACGTAGCGGCGAC GATAGAGTTTACACACCCCAGAGTTACACGGTTCCGCGTGATGTGGTCTC CAAGGTAAAAGCCTGCCTCACAAAGGGCTTTGATTGGGAAGTAGGATCGC AAGTCCTTCATTGCCTCTCCTTGTTGTGTTTTGATATGCTTGCCGCTGAA TCTTCCCACGTAGCACTCGCAGAAATACGCATAGATCGACTCGCGATTGC TTGAACCCCTCTTTAGCGAGCTCGATGGCGAACGTTTCGGATCACAGTAG ACCGGCGTGCACCAGACCGTACACCGTATTCCGCACTAGACCCCCTGATC GAACGAGTCACGGGACCGTACACCGCATTTCGCACTAGACCCCCCTGATC GAACGAGTCACGGTAATCTCGGGTAGCTCGATGTTAAGCTCATCCTCCAC GTCGGCCTCGAGGTAAGCCATATCCATGTCAAGCCGGCGCAGCGCCTCGT CCAACACTGCCTTGATCGCGAGCACCATTCTCCTGCTTGCTTGTGCCGGG GTGGGGGATGATGATTCCTGGTAGTAGAGTACCTTGATTTGGCGGAACCC TTGCGCTATGAATCGGCTCTTGTATTTTTCAACCAGCCCGTCCTTGCCAG GCTTACGCTTGAAATAGGCTTCTGTGCCGACACTGTTTTCCCTCTAGAGT GGAGGATCACATTCCAAACCTGGCACGCGATCTGCCGTCCATTCCATGTT TTCGCGCACGATTCCATTTTATCCATTCGAGTGACGCTTGCGCTTCGAGA AATGTCTCCGACCCTTCTGGTAGGTAGCTCCCGTCGGTCGCGCTTATCAG GACCGGAAACGTCTCGACGTCGTGGATTGCCCCGCTTCTCGTGTGGCGCT GCCTGGTGGGGTGAGGCGCGCCGGTAAACGCGTTATACAGTCTTTGTACG GTAGCTGGTACCTCCTGCGCGGTGCCACTCAATCCCCTTCGTTCGACTGC CCTGTCCCCGGTTTCCCTTGTGTGGATTGCCCATGGTCGGACTCAGCATC CTCCGGCTTCAATTCGTCCTCGTCTAATGCCGCCCCCCAGGCTCCAGCTT GTCCTTGTCAGATACCACCCCTCCCCGGCCCGTGCTCCTTCAACACCCCC CCCCCTCCCCAGGCCCGTACTCCTCCGGTACGGTCTCCAGATGACCCAGC GTGGGGTTGTAGTGGGCGATTTTATTACGCCACGACGGATAACGCGTGAC CTCTCCCCCCCTTAGATACCGCCGCCGCGGTGGTGGGAAGGAAATCTACG GGTTCGGATGGGAAGTGTCACGTGCCACATGACCGCCTAACGCTCGGGGA CCTGGCCGGTGGTGAGGTCGTGGACACGAAAGACATGTTGCGGAAAGTTG GTGGCTCCTCCAAGCCTGATGCACTTGACCCCGCGAGGCGCCAACCTATG CTCGGGTCGCGGGCGGCGCAGATATCCAACGGTTCCGAAGGAGATGCAAT GGTCGAATATCGGTCGGTGTTCAAGCCAGAGTTCGTACCGGGAGACACCG CGGTCGAGGGAGATGATTATGCTCTGGTTTGACACAGGGCAGGCGTACTT TATGGCTTCCACCCAGAGGCGTTCGCTCTTCCCCGCCGTCATACCTTGCA GGAGGACTACAGTTTTTCCGTGCAGAAGTCCGAGGACCCGCTCCACGATA CCGTTTCACTGGGGCGTGTAAGGGGGGGGGCGAATCGCACTTGACTCCCA GCTTGTTCAGGGGTGACCGGAATTCACCATCGAACTCCCCCCCGCCATCG GTGCGAACGGTGCCAACCTCGAGGCCTGCGAGAGCGATATGTTCCACGGC AAGATTCCGCAGTTCCGTCACGGCGATGCTTTTTCTCTTGAGGAAACGAA AAAACTTAAGGCGAATGTAGTCGTCGACGTAGCATGGCGTACCGATTTCC ACCGAGGGAAATGAGGGCGATAAAGCATTGCCCCGCTCGCCCATCGGCGC GGCTTGTGGTTGACTTTGGCATGGCATATCGCCGCACCCTTGACTACGAT CATTGCGCACACGGGCTCCACGTTCCCGTCAGCGTAACACCGGCTATGCG CGCTGTTCCTCGCGTAGTATCTTCACTTGGGTGACCGATGAGCCTGTGGA AGTCCATGATATGCTGCAGGGATGACCTGGCTGTCACCAGGGACCGCGTC GCCGTCGTCAATTTATCTTCACTTTCGCCGCGCCGGTTGAACTTGATCTC GACAGGGCCTGTCTCTAGGGAAAGGAAGAGGAAGACGGGTGACTTGCGAC AGTAACGGGGGCGAATAGGGGCAGCGGCTAGATAAACACGCATGGGCGCG TCAACAACTGTGGTTGGTCACTTTACTGACAAAGGATTTGTGACGTCCTA GCCTTGGCATGTGCGCAACACGGTCAAGCGTCAATTCGTCTGTCACTCCT TGTAAAGTATTACTCCCTTGGTCCACCAAGAATCGCAAACACCCTTATCC CGCCACAGGAAGGAAAACGCCGCCGGCGCTTTCCACTTCATCTTCTGGAG AAGTCGGCGCGTAGTCCCCGAGACCGGTCGAGTCCTCGGTCGTGTTTTCC GTTGCATCGATGTCTCCCACTCAGTAGTTTTCTCCGTCTCACGTACTCGA GGTGCCGCCCGCGGTTGAAGTCGAGCGCATCGCCAGCGCTAGCAAACCCT CCAGTACCGAGATTGGTGCGGACGCTGCCGGGGAATCCGCCTCGATGTGA ATTTGGAGGTGGTAGGTGCTGGTGCGAAGCTCGAACGATTCGGACACTCC GCGGTTTGATGAGATCCAAGACAGAGAAAAAAATCAGGGCGGGCGGTTTT CTCACCGGCTTCGTAATCCTTGCCATTTTTTTATTTGAAGTGTTTGGGTT TTCCACCATTCCCGCTGCGGTTTTTACCGCCGTCGCCGCCGCCACGGTCT CTGTCCCGCTTCTGTCCGCTCGCGAGCAATCCAACAATAGGAGGGGGGGA GATGGGCAAAAAAATCCCCTATTGCATGTGAAATGTAACCAAAAGAGCTC CCCGTTATTTTTTGTTTGTTTTTTTAATCCCACTTATAGTGGATGGACCT CAACATTACCTCCTGCCTGTGGTCATTAAGGATCTTTCCATCTCCCCCCG GTTCATGCCTTGCGAATTTTTCAATGCGATGCAAGTTCAGCACTCTTACA ACACGTCAAGTAAAAATTGAGTTTTACTTATTCACGTTCTCACGCTTTCC ATTACGGGAGAAAGAATACAAATGTTGCTTTTACAATAATCGAACTCACG ACTTCCGCACCAGCAGGTGTGCAGGACAGACCACTCGGGCGACGAGGGAT ATAATTGAATATCCCCTTAGCTGCGGATGGACAAGCTTGCCCCAGATTAA ACTCATTCAAGCAGGGGTTTGATCAAATATGTCCCCGGGAGGGGCTCTTT CGATAATCCCCCCCCCAAATAGGGGACACTGTAGGCCCATCCCCCCCCTA TCGTTGAATCGTTCTCACCCTTTTGTCGCGGCGAGTGATATGGAATCCAT AACATTCCAGAGGAGAGTGACCTGTGCGAGAGTGGAGAGGGCAGCGCACG GGGAATGTTGCGGTGCGGCCTTTGCCACGGGCGGTCGATTTTTTTACTCG CGGCGCTCGTATTGATTGATGACTCACGCGATCCACTATTGCGTCCGCCA ATCCGACGAGCTCTTGAGCATGCAGACTTCAGCGTCGTATTGTGGCGTGA GTCCGCCGAGGGTAACGATTTCGACATCCTTCGAGTCTACTGGTCGGTCT AACTTTGCCAGCTCCTGCACCATTTGATCTACCCGTGTAGCAGTAACTTT CGCGGGTGTTTGCCGAGAGCTCCATCTTCATCGTGTAGAGATCGATGGTA AGCCGACAACGCTTCTTCAGCCCGTGCGCATGATAATGCTAATGCTAATG ATAACGCTGGATGAGCTTGGCCCAGGCCTCACTGGCGGATCCATCCTCTT GCAAGGCTTCACGATATCGAAAGGAAACCCCTTGAAGGGCGACAACCAAC TGAACCTACTGCTGTTGGGCCTTGTGCCATTGATCGGGGTCGGCTGGGGT CGAAATCGTCGCAGCTGACCTCTTCCCCCTCGCCTGCGGTCTCGGTGAGC ACGTCTGCGCATCCGAGTACCGATAGTTTCACCCGATGGACACTGGACCA TGTAGTCCAGTACTCGGGCTCCCCGGAGAACTCCTTATACAAAAAACGGT ATGGCTATTTACCCCGCCGGTGGGGTATTTTATTATTTACCCCACCATCT GGATCTCGCGTCAGAAGACTCGGTTGGCCACAGTACATGCATGAGTGTGT TGGCGCGTCGCAGGGCTATCCCGGGGTCTATTGTGCAGCCCAAACGGTCT TGTCTAGGTGCTGCCACGGCCGGTGGGGTACAGCGGAATTCCCGGTAAGT ATGGCTATTTGCCCCACCGGTGTGGGGATTCCGCTGTACCCCACCGACCG TGGCAGCACCTAGACATGACCATTTGGGCTGCACGATAAACCCCATGATA GCCCTGCGACGCGCCAACACACTCGTGCATGTACCGTGACCAACCGAGTC TTCTGACGCGATCCAGGTGGTGGGGGTAAATAAGAAAATACCCCACCGGT GGGGTAAATAGCCATTTCAAAAAAATATATATATATTGATAGACGATATT TTTCTACTGGGGGTCTGGTAGTGGCAGGCATCCAGCCGGCTCTTGTTTCC TGCCTTATTGACATGTAATTTTTTCTTGATCAGCGCGATGCTGTTCTTGG TTGGTGCGATGCTGCTCTTGGGCTCGCTCCTTGGCGGCCTGACGCTGTCG CTCCATTATCTCGAGCATTTGTAGCATGAGTGCGGTCGGGTCGATCGATG ACATTGTTATCTCTCTCGGTCTGCCGTCGCGTAGCAAGCAGCAAACGCAT GGCCGTCTCCCTTGATCAAACCGTTAACCAACGTCCTAAGAGCACTGAGA GACTGTGTGCTGTTGCGTGGATACGGCATCGGTCCCCGACAGGATGATAT ACCGTATATATTGGCTGGGGGTGTCGGGGGAAAAGAGAAGATGTGTAACA AATGACTTTACCGATTACACACGTACCACGGACTCGACCACGAAAGTTTT GGAAGTGTACGCCAGGAGCTTGCCTCAGATAAAGTGCGGGTGCAACATCT TGTTCTGAAAAGGGCATGTGCTTGTAACCTTCGTATCCCGAACATCCACT GGGACATCCTGCAAGCGGATCCCAAGCTTGATCATACCGGCAGACCACGA GACTTGCTCTTTAATCGTCACCGGGAAGCTGAACCATCAAACTCACTAGA AATTTGTTCTCACTGTGCGCTGGGGCTCAGGACACAGCATCGCTATGAAC AGGGCGTTTGCGTCACCACAGACTAGGCGAAAAGTTGCACCTAACTCTAA AAGTGTTGTTTATAGCTCCTCGCTCTTTTAGTGCCTCTGTGTGTTATCAG TACTATTTACCTTGCGGTGGGTTCTACTCTATTTCGTACCGAGTACAATA CAGTACAGTACAGTATACATTTTTTATAACCTTTACCTCGTGGTCCGATA GTATTTTGTTTGTTCCAATCCTTATCGCATGCGCGCGCATGATGTCGCTC GCAGATCGATCTGCGCGGTGCTCCGATGAAGGCAAAGATGAAAAGGTTTC AGCGCGACACAGTGCCCCTGATGGAATACCTCAGGGAGCGGGACGCTCGA AAGCAGATCAAGGTACTCTCGCCATATGTAGAGTTAGTTCGTTGAAAGGT AGTGGACGTATATCAAGCACGGTTCTGCTCTCTGTGCCGCCATGAAAGCG GTGTCTCGCGGAGAAAAATCTAATCAAGGACGCTCTGAAAGTTGATCAAG GTAGTACGCCTATGGCGGACGTGCATGAATCTAAACATAGTCGCTATTTT CTTTGGCATATCAACGTCGAATGACCAAACGAGTAATGCAGGAGAACCCC TAGCGTTGGTAAGGTTGGGACTTGTTTCGATGGAGTAGAGTGGAGGATTC GAATTTTGTTAGATTATTCACGCCGGAATATATTCACTGTTAGTATGCAT ATTATCGGAGAGGGGAGGGGTAGGGGGTAGGGGGGGGGGGTTATTCTAGG GAATCGCACCGTCTCGAGCTCTTCCATCTCCCACCACAGCCTTTAAAAGT ATAGATCGGACGCCACGATAAAGGAGTTGGTACGAGAGCGTTAAAATTGT GTGATCACAGGTGCGATGTCACGATTTTGTGTGATTTACGTACGTATCAT GTGTGTATGCATGTGTGATTGTAGCAGATTGGGTATCAACCCGTAGGGTT GACCAATCCAGCTCGTAGTTAGCTAAAGAGGTATTTTTTTTCTTCTTCAC CCTTGTCCCCATTCGCGCCTGAGAATTTCGTCTCGCGAGACAAGTTCGGT ATGCACAAATACTTGTGGTTTGATGTGAAGCCGTATAATGTGGCGTGACT TCACACGTACAGCACCGGTAGGTAGCAGTTTCGACAACATCGTGAGGGGA TGGATGGAAATACTGCCCCGAACGTCTCCACCACCCGTGTTGGCCTTGTA GACTACAAATCTCCGGATATGTATTTCGCAGGGAATGATGTCGTGTATCC ATAGAGCGCGTTTGTTTTCAACCTCAACCTCAATCTCAATCTCTGGATTT TGGACGCTGGGACGGGGGGGGGGGGGCGAAAAATGTAACAGGTGTCACCG AGTTAGTTTTGGGGTTGTATCTCACTCACGGCTATAAGCCTCCACGTGCC CGGTTACCAATCAATCCCACCCACTACAACGTTACCATCCTGCCTGTGGT CTCACTAAGGATCTTGCCACCTCTCCCCGGTTCTCGCCTACTACGATTTC CTATCGCTATCGATGCATGTTCAGCACTCTCACATCCCGTCAACCAACGG CCGAGTTCTGCTTACTCACGTTCTCACGCTTTCCACAGCGGAAATCAGAC TGAAAGAAACTATTCTGCCAAGAACCGAACTGTCTCACAAATCCGCATAA TGCTAATACTAAAGTTGCGAGGCAATCCTCTTCTCCAATCGGGCGGCGAG TGAATAGCTAGAGCTGGGCTAGAGCTGCTCCGACGTCTTGAATTATAAAA AACCAAGCCCGTTCTGCCTTCTCGATACGAACGCACGCACTTGACTGATC CACAAGAGCATAATCCATTGTCCGGGCCGCAAACCACTAAGCCTGCCCCC GCGCGCTTTGTAAAGGTCTTTGTCTTTGTGTAGGTCTTTGTCTTTGTGTA GGTCCTTGACTTTGTGTAGGTCTTTGTCTTTGTGTAGGAGAGGGGGGGTA GTAGGATGAAAACGTCGTTCGTTCATCGCCGACTTACCACCTCTCAATGC CACTACACAACATCATACTGCCGTAAGAGTGATCTTCTCTGCCATTTGCG CCTCCGGAAAAAAGACGGACCTGTTCAACAAGCTATCCGCAAGCCTGTAC CGGGAGGTGGTGGACTATCCGGCGGGGCGGCACCTATTACCACTCGTCAA GGCCGTCTGCCGCTCCTTCGTGGACGTTAAGGAGCTTACGTGAGCGGCTT GGTTGAGTTCCATCTCTCGGATGAAAGTGACTCACTTCATCCTACATGCG CGGGTCGGACATATACATTTTTTCTTCTTTTTTCCCCTATAGTATCTAAA GAGCTTACTACGTGGCAACCACCGGCCGGAATATGTTAGGCTTGCGCAGA ACGCCCGACGATTCTCGCCATTCTCTGACAGTTGGTTTGTGATACTCCGC TGCCACGGTCGCGTTTCTTTCTTTTCGGCGAAATAACATTCTCGGGAGCT TTCACTCTTCCCCAACTGGAAAGAAATCTCCCACATTATTACCCCTCGTG ATGTGATGCCTTCGTTGTGAATGTCGTTGTGTTTTTTCGTTTTTTTTTCT TCTTCCCGAGGCGCAGACAAGTGGCGCGGCATTGCGACCGACTCTTTCCC CCTGACCTGGCAGGCACGTCCGATGACCCTCAAGCAGCGGCGGCCAGCGT GCGGCGTAAGTTCACGGCCCTCCGCAAAAAGATTGAGCGCAAGCGCCTGG CGTCGGAGCTGGAGCTGAAGATGCGCGCCATATACTATGACGTCATCGAT CCTGCAGCCGTGGAGGGTACATAGCCTCTATCTACAGACAGGTGGAGGGG GGGGGGGGGGGGGATGCGGGAACTCGCTATCGATTTGAGCTTTTTATCTC GGCACGCGCGAAACGCTGCAACGAGGACCAGGGGGCAGAGGAGAAAATGT GGTGTAGAGTGCTTGCAGTAGATTATTCAGGTTCAGTTTGCTACAACAGT AACTGTGACATGGCGCGAGTGAGTAAGCTTCGAATAACTTCCTCCGGTCC GTCTTTGTTCGCTACTAAAGAGTCTGTCACCGACCAAAATAGCCACTCGT AGCTGCGGCTGTCGGCGCCGATGATACGGGGAGAGGGCGCTTGCTTCTCT CTCTCTCCCCCTCCTCAATTCTCTTGGCAAAGAGACAAACAGTGACCGTG TTAGAACATCCGGCAGCAGGTAGAGCCGCTGGAAGACATACAGTTCATCG TGCGTAGAGCCAGCAAGATATTGCCGCCGAATTCCGACGATATCACGGGG GTAGGGATCGAGAGGAGTATGCTGGCCCTTCAGAAGGAGATGACCGACGA CCGGCAAAGGTAAAAAACAGGTGGTTTTGTACTCATATGACTTTTTTGTT GTTGTATCTGGTGGATATACGTGGAGGGAGGGGAGAGAAGGCAAAGCAAG ATTCTCCCCTCCCCCCAGCCCCCGTTAGTTCGTTTTTTATTCCTTGTGGA CAGCTAGTTTTTTAGTCTCTCGCTTTGCTTCCATTCTGCCGAGTAGTTGC CGCGTACATATTTATTTGCCCTGAGTATACCATAGCATCTTCTCTATCTC TCTAGCTCTCTATCTTTCTACATATAACAAGAATCACGGAACGTACAAGA TAATATTGCCTGATGGGGCACACACAACTTTTTGCCTCGTTCGAAGCCCT CAAAGTGACACTATTAATAGATTTGATTGCTACGACACCCACAACAAAGA GCGATCCTTTCATTCAAGACTGGACAGCAGCATGCATCCTCCGAGCGGAA TCAACCCCTTGTTTCGTACTACTAGGTGTATTAAATATTCAATATTAATA TCGATATTGATAACGTTGCAACAGGTGTGTGGACGGGCTGTTCGAGGCGC TGAGCCACCTGTACAGCGACCAGGAGCCTTCCAAGGTTCTTGACTTGACC CAGAATGTGGCCGCTGTGTTCGGCAGGGGCAAGCGCTTCGCCGAGGGCAA CGAGCTCGAGGAGCTCAAGCAGCTAAGGGCCGACGCTGAGGTCAGTGACG AATTGGCTCCAGCGTCAATCCGTCGAGTTACTATTTTTTTAACATAGTAT TTTGCTGCTTGCGGTAGCAGACAAAAAGGAATAAATAGTTGATTCAATAT TGAATCACAGTCATAACATGAAATGTCAGGATGAAAATCTGCTCCATGCC GGTTTACGAAGTTGAGCAATGATGAGGTCATTGTAGCGCCGCCATCGATC CGATGATCGGTAGACACTTACGGGTACCGTACTATCGCGTTATACTACTG TATTACTGTATCGTACTTCATGTCCTTACTACAGTGCTATATTTACTAAC GTGTAAGGTACTCTTCGAGCCTTTTAATGGCACCATTACCGAGGACAGGA GGAGTTTGCGTAATATCGAGAACACTTTGATTTTGTCCCTCGTTCGTTTC GTTTGTAATAATAGTATCCAGTGGGACTCGAACTACAGTGAGCGCTTCCA ATTTTCATTATCAGTCTAGGTTATTTCAATTAAGTTTGTTGGTTGTGTGG TGAGGAACGAGTAGATAGTGTGCTCATAGGCGGTATAAAGTGAAAAGCTT ATCGTCCTGACCAAGGCAAGGACAACCAACAACGCGAATGAATCCTGTTG GTTTATTTTCCTCCCTTTTTCCTATATGCCTAGCTCTATCTATTATAGTC TAAACAATGAAATATCTTCTTGCCGATCGCCGTCTGCTCTTGTTTCTTCT TCGATCACCAAACAACCCAGCGTTTTTTCCCGTCGGAAATCCAGGAGGCG GAGCCCATCCGCGTCCGAACCCTCTTCATTTCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig847:336731..352063+

>mRNA_F-serratus_M_contig847.19855.1 ID=mRNA_F-serratus_M_contig847.19855.1|Name=mRNA_F-serratus_M_contig847.19855.1|organism=Fucus serratus male|type=CDS|length=1482bp|location=Sequence derived from alignment at F-serratus_M_contig847:336731..352063+ (Fucus serratus male)
ATGGGACTCAACTGCGTACCTACACCAGTCCTCCGAAGCACGAGATGGGA
CTCAACTGCGTACCTACACCAGTCCTCCGAAGCACGAGCTTGGTCAGACT
AGACTTGGCATACAATCAGCTTCCCGCAGTGCCTGCATCGATTGCGTCAC
TAACGAATCTGGAACATCTCTGGCTGCAAGGAAATCCCATCGAAAGCATT
CATGCAGATATCCAACACTGCACCCGACTGAAGGCGAGCTTGAACCTTGG
TCAGACTAGACTTGGCATACAATCAGCTTCCCGCAGTGCCTGCATCGATT
GCGTCACTAACGAATCTGGAACATCTCTGGCTGCAAGGAAATCCCATCGA
AAGCATTCATGCAGATATCCAACACTGCACCCGACTGAAGGCGAGCTTGA
ACGTTCTCGACCTGAGAGATACGGCTCTACGGAAGCTACCTCGCGAAATG
GGTCGCTTGCCGAGGATACTCGAGGCAAGGAAATCATTATTTCTTCTGTG
GGTTCTCGACCTGAGAGATACGGCTCTACGGAAGCTACCTCGCGAAATGG
GTCGCTTGCCGAGGATACTCGAGGCAAGGAAATCATTATTTCTTCTGTGG
ATCGATCTGCGCGGTGCTCCGATGAAGGCAAAGATGAAAAGGTTTCAGCG
CGACACAGTGCCCCTGATGGAATACCTCAGGGAGCGGGACGCTCGAAAGC
AGATCAAGATCGATCTGCGCGGTGCTCCGATGAAGGCAAAGATGAAAAGG
TTTCAGCGCGACACAGTGCCCCTGATGGAATACCTCAGGGAGCGGGACGC
TCGAAAGCAGATCAAGACGGACCTGTTCAACAAGCTATCCGCAAGCCTGT
ACCGGGAGGTGGTGGACTATCCGGCGGGGCGGCACCTATTACCACTCGTC
AAGGCCGTCTGCCGCTCCTTCGTGGACGTTAAGGAGCTTACACGGACCTG
TTCAACAAGCTATCCGCAAGCCTGTACCGGGAGGTGGTGGACTATCCGGC
GGGGCGGCACCTATTACCACTCGTCAAGGCCGTCTGCCGCTCCTTCGTGG
ACGTTAAGGAGCTTACACAAGTGGCGCGGCATTGCGACCGACTCTTTCCC
CCTGACCTGGCAGGCACGTCCGATGACCCTCAAGCAGCGGCGGCCAGCGT
GCGGCGTAAGTTCACGGCCCTCCGCAAAAAGATTGAGCGCAAGCGCCTGG
CGTCGGAGCTGGAGCTGAAGATGCGCGCCATATACTATGACGTCATCGAT
CCTGCAGCCGTGGAGGGTACATAGACAAGTGGCGCGGCATTGCGACCGAC
TCTTTCCCCCTGACCTGGCAGGCACGTCCGATGACCCTCAAGCAGCGGCG
GCCAGCGTGCGGCGTAAGTTCACGGCCCTCCGCAAAAAGATTGAGCGCAA
GCGCCTGGCGTCGGAGCTGGAGCTGAAGATGCGCGCCATATACTATGACG
TCATCGATCCTGCAGCCGTGGAGGGTACATAG
back to top