mRNA_F-serratus_M_contig847.19853.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig847.19853.1
Unique NamemRNA_F-serratus_M_contig847.19853.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A6H5K366_9PHAE (Histone acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K366_9PHAE)

HSP 1 Score: 97.8 bits (242), Expect = 3.720e-18
Identity = 52/102 (50.98%), Postives = 62/102 (60.78%), Query Frame = 3
Query:   42 SSWSGMDRKAALRQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVIANARRQRR 347
            SSWS +DR AALRQQQ+RLLLLRHASRC   E+G  C  SP C  VK LW+HI  C D +C  PH                 +C LCGPVRA+I+  R ++R
Sbjct:  248 SSWSRLDRAAALRQQQERLLLLRHASRCPFREEGQ-CPTSPHCLVVKVLWRHIVQCMDASCMVPHCASSRFVMGHYHKCKEPKCHLCGPVRAIISRERDEQR 348          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A7S3UR13_HETAK (Histone acetyltransferase (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UR13_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 2.360e-11
Identity = 50/97 (51.55%), Postives = 67/97 (69.07%), Query Frame = 3
Query:   60 DRKAALRQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVIANARRQRRE 350
            +RK  LRQQQ+RLLLLRHASRC  +E  + CQ +  C  +KALW+HI++C+D+ C   H    XXXXXXXXXXXX   P+C PVR  I   + ++++
Sbjct:    4 ERKQVLRQQQQRLLLLRHASRCP-TEPPARCQYTESCARMKALWQHISNCKDQQCATGHCVSSXXXXXXXXXXXXXXXPVCSPVRDAIKRNQERKKQ 99          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A7S2XU59_9STRA (Histone acetyltransferase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XU59_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.490e-9
Identity = 39/103 (37.86%), Postives = 53/103 (51.46%), Query Frame = 3
Query:   15 TGVKPSKGRSSWSGMDRKAALRQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVI 323
            +G KP+ G + W      + ++ +Q+RLLLLRHAS+C   +    C V+P C  +K LWKHIA C+D+ C   H                  CP CGPVR  I
Sbjct:  681 SGKKPAGGDAEWQ-----SKIKHKQRRLLLLRHASKCQYED--GACPVTPFCPSMKKLWKHIADCKDQLCKVQHCVSSRYVLSHYKRCKDVRCPACGPVRETI 776          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A7S1UG10_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UG10_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 2.950e-9
Identity = 56/93 (60.22%), Postives = 66/93 (70.97%), Query Frame = 3
Query:   66 KAALRQQQKRLLLLRHASRCAC-SEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVIANARRQ 341
            KA LRQQQ+RLLLLRHAS+C   SE G  C V+P C  +K LWKHIA C+D+ C    XXXXXXXXXXXXXXXX    +C PVR  I  +R++
Sbjct:  391 KALLRQQQQRLLLLRHASKCPFDSESGQQCTVTPHCASMKKLWKHIAECKDQRCQVXXXXXXXXXXXXXXXXXXXXXSVCAPVREAIQRSRQK 483          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A7S4S4V4_9STRA (Histone acetyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S4V4_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 4.520e-7
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 3
Query:   78 RQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVIANARRQRRE 350
            R +Q+RLLLLRHAS+C   E G  C ++P C E+K LWKHIA C+D+ C    XXXXXXXXXXXXXXXX  C  CGPVR  I   ++++++
Sbjct:  106 RHKQQRLLLLRHASKCE-YENGK-CPITPHCQEMKTLWKHIASCKDQNCNVRXXXXXXXXXXXXXXXXXXXCAACGPVRETIRKGQQRQQQ 194          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A7S4S3L3_9STRA (Histone acetyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S3L3_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.540e-7
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 3
Query:   78 RQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVIANARRQRRE 350
            R +Q+RLLLLRHAS+C   E G  C ++P C E+K LWKHIA C+D+ C    XXXXXXXXXXXXXXXX  C  CGPVR  I   ++++++
Sbjct:  106 RHKQQRLLLLRHASKCE-YENGK-CPITPHCQEMKTLWKHIASCKDQNCNVRXXXXXXXXXXXXXXXXXXXCAACGPVRETIRKGQQRQQQ 194          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A7S1Z8B2_9STRA (Histone acetyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1Z8B2_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 5.810e-7
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 3
Query:   78 RQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVIANARRQRRE 350
            R +Q+RLLLLRHAS+C   E G  C ++P C E+K LWKHIA C+D+ C    XXXXXXXXXXXXXXXX  C  CGPVR  I   ++++++
Sbjct:  468 RHKQQRLLLLRHASKCE-YENGK-CPITPHCQEMKTLWKHIASCKDQNCNVRXXXXXXXXXXXXXXXXXXXCAACGPVRETIRKGQQRQQQ 556          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A835YP23_9STRA (Histone acetyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP23_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.460e-6
Identity = 51/87 (58.62%), Postives = 60/87 (68.97%), Query Frame = 3
Query:   63 RKAALRQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVI 323
            R   LRQQQ+RLLLLRHAS+C      + C V+P C  +K LW+HIA C+D+ C    XXXXXXXXXXXXXXXX    +CGPVR  I
Sbjct:  867 RAQVLRQQQQRLLLLRHASKCVLE---APCAVTPHCAAMKKLWRHIAECKDQKCPMXXXXXXXXXXXXXXXXXXXXXXVCGPVRDAI 950          
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Match: A0A482S2J4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S2J4_9ARCH)

HSP 1 Score: 60.5 bits (145), Expect = 1.040e-5
Identity = 54/96 (56.25%), Postives = 63/96 (65.62%), Query Frame = 3
Query:   63 RKAALRQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAHCQDKACTRPHXXXXXXXXXXXXXXXXRECPLCGPVRAVIANARRQRRE 350
            RK  L+QQQ+RLLLLRHAS+C   E G  C V+P C  +K LWKHI  C+D+ C    XXXXXXXXXXXXXXXX    +C PVR  I     + RE
Sbjct:  655 RKQVLKQQQQRLLLLRHASKCP-HENGQ-CPVTPHCWNMKQLWKHIMSCKDQDCKVAXXXXXXXXXXXXXXXXXXXXXVCAPVREAIKRNYERSRE 748          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig847.19853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A6H5K366_9PHAE3.720e-1850.98Histone acetyltransferase n=1 Tax=Ectocarpus sp. C... [more]
A0A7S3UR13_HETAK2.360e-1151.55Histone acetyltransferase (Fragment) n=1 Tax=Heter... [more]
A0A7S2XU59_9STRA2.490e-937.86Histone acetyltransferase n=1 Tax=Attheya septentr... [more]
A0A7S1UG10_9STRA2.950e-960.22Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S4S4V4_9STRA4.520e-756.04Histone acetyltransferase n=1 Tax=Ditylum brightwe... [more]
A0A7S4S3L3_9STRA5.540e-756.04Histone acetyltransferase n=1 Tax=Ditylum brightwe... [more]
A0A7S1Z8B2_9STRA5.810e-756.04Histone acetyltransferase n=1 Tax=Ditylum brightwe... [more]
A0A835YP23_9STRA2.460e-658.62Histone acetyltransferase n=1 Tax=Tribonema minus ... [more]
A0A482S2J4_9ARCH1.040e-556.25Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig847contigF-serratus_M_contig847:295502..308084 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score70.1
Seed ortholog evalue9.4e-10
Seed eggNOG ortholog3218.PP1S462_17V6.1
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0003006,GO:0003674,GO:0003824,GO:0004402,GO:0006325,GO:0006464,GO:0006473,GO:0006475,GO:0006807,GO:0006996,GO:0007275,GO:0008080,GO:0008150,GO:0008152,GO:0009791,GO:0009908,GO:0009987,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019538,GO:0022414,GO:0032501,GO:0032502,GO:0034212,GO:0036211,GO:0043170,GO:0043412,GO:0043543,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0048367,GO:0048608,GO:0048731,GO:0048856,GO:0051276,GO:0061458,GO:0061733,GO:0071704,GO:0071840,GO:0090567,GO:1901564
EggNOG free text desc.histone acetyl-transferase
EggNOG OGs37Q3J@33090,3GB7Y@35493,COG5076@1,KOG1778@2759
Ec32 ortholog descriptionZinc finger, TAZ-type
Ec32 orthologEc-11_001290.1
EC2.3.1.48
COG Functional cat.K
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Exons4
Model size2006
Cds size420
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig847.19853.1prot_F-serratus_M_contig847.19853.1Fucus serratus malepolypeptideF-serratus_M_contig847 297032..308028 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932494.9175463-UTR-F-serratus_M_contig847:295501..2970311622932494.9175463-UTR-F-serratus_M_contig847:295501..297031Fucus serratus maleUTRF-serratus_M_contig847 295502..297031 -
1690964336.1640935-UTR-F-serratus_M_contig847:295501..2970311690964336.1640935-UTR-F-serratus_M_contig847:295501..297031Fucus serratus maleUTRF-serratus_M_contig847 295502..297031 -
1622932495.1699276-UTR-F-serratus_M_contig847:308028..3080841622932495.1699276-UTR-F-serratus_M_contig847:308028..308084Fucus serratus maleUTRF-serratus_M_contig847 308029..308084 -
1690964336.2253497-UTR-F-serratus_M_contig847:308028..3080841690964336.2253497-UTR-F-serratus_M_contig847:308028..308084Fucus serratus maleUTRF-serratus_M_contig847 308029..308084 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932494.9349885-CDS-F-serratus_M_contig847:297031..2972801622932494.9349885-CDS-F-serratus_M_contig847:297031..297280Fucus serratus maleCDSF-serratus_M_contig847 297032..297280 -
1690964336.1867192-CDS-F-serratus_M_contig847:297031..2972801690964336.1867192-CDS-F-serratus_M_contig847:297031..297280Fucus serratus maleCDSF-serratus_M_contig847 297032..297280 -
1622932495.1037867-CDS-F-serratus_M_contig847:304470..3045761622932495.1037867-CDS-F-serratus_M_contig847:304470..304576Fucus serratus maleCDSF-serratus_M_contig847 304471..304576 -
1690964336.1952631-CDS-F-serratus_M_contig847:304470..3045761690964336.1952631-CDS-F-serratus_M_contig847:304470..304576Fucus serratus maleCDSF-serratus_M_contig847 304471..304576 -
1622932495.130711-CDS-F-serratus_M_contig847:307129..3071821622932495.130711-CDS-F-serratus_M_contig847:307129..307182Fucus serratus maleCDSF-serratus_M_contig847 307130..307182 -
1690964336.2046888-CDS-F-serratus_M_contig847:307129..3071821690964336.2046888-CDS-F-serratus_M_contig847:307129..307182Fucus serratus maleCDSF-serratus_M_contig847 307130..307182 -
1622932495.1498182-CDS-F-serratus_M_contig847:308016..3080281622932495.1498182-CDS-F-serratus_M_contig847:308016..308028Fucus serratus maleCDSF-serratus_M_contig847 308017..308028 -
1690964336.2139313-CDS-F-serratus_M_contig847:308016..3080281690964336.2139313-CDS-F-serratus_M_contig847:308016..308028Fucus serratus maleCDSF-serratus_M_contig847 308017..308028 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig847.19853.1

>prot_F-serratus_M_contig847.19853.1 ID=prot_F-serratus_M_contig847.19853.1|Name=mRNA_F-serratus_M_contig847.19853.1|organism=Fucus serratus male|type=polypeptide|length=140bp
MDRKAALRQQQKRLLLLRHASRCACSEKGSVCQVSPDCDEVKALWKHIAH
CQDKACTRPHCESSRFVLKHYSRCRHRECPLCGPVRAVIANARRQRREES
NGGEAQEGEGHEDSDEDMEDFEDRDGDGDNVDDDDDDDL*
back to top

mRNA from alignment at F-serratus_M_contig847:295502..308084-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig847.19853.1 ID=mRNA_F-serratus_M_contig847.19853.1|Name=mRNA_F-serratus_M_contig847.19853.1|organism=Fucus serratus male|type=mRNA|length=12583bp|location=Sequence derived from alignment at F-serratus_M_contig847:295502..308084- (Fucus serratus male)
GAGGGAGGGGAGGGACGGGCGTCAAGCCTTCCAAGGGACGTTCTTCTTGG TCCGGGATGGACCGAAAGGTCGGCATCGATCCCCTCACGCGCGGGGGGGG GGGGGTGGTCGTGATGTTTTTTTCGGTCTCACCTGATGTAGTCGTTTGTT GTGTAGATATTATGATATCATACTGTTTGTATGCTTCGAGCCGCTTGCCT CCCGGGGCATGCGCCGAAGGTTGTTTCTTACCTTTTATTGAAACTCACTT GTCACCTGTTGTTCCGATTTACAGTATTATATTATTAGTATTACAGTATT ATTAGTATTACTAGCAGCGCGGTATTTGAAGTGGCGTACATTTACTTCAG ACAGCAAAAACTGTTCTATACTATAATCACTATAAATACAAGAAGCGTTG TCACCCGTCCTGCTACCCCCACGCCCCTCCCCCAAGAACATACCTTTAGT AAGTAATCAAGTAGATACAGCCATAGAACCTATACAGTACTAATAAAGAA AGGTAACGATCGTGAGCCTTCCTTGCAAGCGGCAAGTCGAGTAACGGACG TTCGCCGTCCAAAACGGTTTTAGTGTATCAAAAGCAATACCAGTACTTGG GACACGTTGGCCGATATTTTTTCTGTCCGCACCTGTGTGCGTTTTTAATG TGCCTTCTTTGCCACGAGAGATGTCGCCCATGTCCGCAGAAGTTGTTTCT CTAGTCGATGGTTAGTTTCAACCTACGTCACGCTCAGTCTGCCTTGTTGT ATGGATATAAATACACTAAAGGAACACGCCTCGGTGGAGAAACCCTCCCT CGTAGTATCCCACAATCCCATAGGAGTACTATTAAATGCTGTGTCGACTG ATAGAACGAAAAAACGAATCAATCTCTTCTTTCTATCTCCACATTTCTCC AGGCGGCCCTTCGGCAGCAACAGAAAAGACTTCTACTCTTAAGACACGCC AGCAGGTGAGACAAGCCAGACAGCAGTACTCGTGCAGCAGCCGTTCCTGA TAGTTGTGGATTCTCACAACACACTAGATGTGCCAACGAAGTAAACGAAC AAGAGACCAGCAGTGTAACTTTTGAAGTGGGGGGGGGGGGGACGCAGAAA TGGGTCTAGCCGTGGGCGAACCGTTGTTATTTTGTAGGCTAAACTGCTCT CGGGTATTTTTGTGCTATCAATACTATAATTGTACTGTTCAAAGAAAATC TGACCGCATCTAGGCATTCTGAGCATCCCCATTGTCAACACGTTTAGGTG GGATCTTAGGCTGCAAAGACAAAACCTCTCCATGACATTTAATCGGGTTC CACGATGGTAGTAACATTGGGTCAACAGTATAATGTCGGGGAGAAACCTA CTGTTGTACTGTTACATGAATCGCCATGCAGGGACACCAATCAAAACAAG GACAAAATACACGATGGGCCTGGATTACAGCTGAATTTGTTACATTATTA CACATTATTGTGTCTAAAAATATTAAACTAATGTAGTAGGATTGGGTGGG TATCGATAAAGGAAATCTATCAACACAAGTCATATAAGATGTAGAGATGA TAGAGAAAATTGTCCACTAACTATTCCTATACGGTACATACTCACAAGCA GCAATTATGGTGTGGAAATGAAGGAATATTTTATTATTTAAGATTAACGA AGAGTTCAGCACAGAGAGGACCGCCAACGTACATGTGTATGTCTTCAACA TATTCCGGAAGTACAAGACACCGGTGTTCACCTCGACTAAGAGCAGTGGG GGATCTCACGAGGAAGTAAGAGGCAAGCTATAGTGGGGTGGGTATGAACC TTTCGCGCGCTACCTATGTATAACACAGGGCTGCGGCACACAGATGCTCC TCCTACATCGAGAGCTGTATGAGGAGCATCTGTGTGCGGTAGCCCTGACA GGTAGCGCGCGAGATGGGTCCATACCTATGCGCTTGCCTCTTACATCCTC GTGCGATTCTCAACTACTTAAATCGTCTACTTTCAGGTGAAGACCGGTGT CTTGTCCTTCTGGATTATGTTGAAGACATACACATGTACGTTGGTGGTCC TCTCTGTCCCTTTCTTCTAACGGGTACATTAGGAAGTCGGCCACTTCCAG TGCCGTATCTGGTAGATTTTATACCAGCAAGGGTAGCTGTTCAGGCTCTG CTCTACACAGCTCTACGCGGGGAAGAGGAACATAAAAACCCAATGGACCA ACGGACATGACAGACGAGGCGCACTGAGACACCTTTTGCAAGTGCGAATC TGTGGCCTAGTCGTTGCCTCGTCGAAGCAGTGGACATTGGAAAGATGGGC GAAGAATCTACACCTTGTCTAAGCACTACATGCAGCATGGTTGATTCTTA GGCACCACAGGCGGATGAATACAACTTTCAACTTTGCAGAAAGTGAGGAA CAAACCCTCTCCCCCCCTTTCTCGGAGTCTCCCCCCCATCCCCCATCCCC CAGCCCCCATCCCTCATTGGGTGTCGCTGCAGCCCCTCTTCTGTTCCGAG TTAGTGCAGCAGTCGTTGCTGTCGACGACCGTGATGGTCTTGCTTTGCGC CGGGCGCCGGATTGTGGTGGTTTGTGGTGACGTACTACAGTGACTCGCCG GGTAGTCGTTTACGTAGTAACCACTCCCTTCCACCACTCCCTTCCACCAC CACGCGCCAGTCTACCATCACTAAAACTCCTACTGTGTACAAGCTGGGCT GGCCAAGAAACTGACTTCTGTTCGTTCATGTCTCGCTCTGCCATTTCTAC GAGTTAAAGCTTGAAATTTGGAGGCTGCTCCTATACGGCAAAAAGGGAAG CGCAGGCGCCGGAATTTTTCGAATCCGAGTTGATTTTGGTAAACAATGAC CAAATGGCGGCGTAGTGGAGGATACTTCCTATACTAAAATCAGTATGAAA AAAAGTGGCACGGATCAAGCTGAAATTTGGTGTACACGTACCCAGGAGCA CCGCAAGAGCGTGGGTGGTAGTTACAAGGCTCGCCTCGTTTTCTATCAAG AGTTGCGGCCTCGTAAAGATTCCGATACAAAACACAAGTGAACTGAGGAA ATGTGGGGGTATCGCGATTTGCCACGCGGGTTTTATGATTTTTCACCTGA ACTTTCGACACGTGATTTAGACCACTCTTGCGGAGAGGACCACCCCTGCA CATTTATTTTATTTTATTTTTTCCCAGAATTTCGTCGCGAAACAAATATT CCCACATCTACTTATATCCGGCTATCATACCATAACTTACGAAAAAAAAA ACTAAAACCAAAATGTGCAGGAGTGGTCCTCTCCGCAAGAGCGGTCTAAA TCACGTGTCAAAATTTCTGGTGAAAAATCGTAAAAACCGCGTGGCAAATC CCATTCCGCCATGTGTACAGCGTCTTGGCCAGCCCAGCCTGTAGAGCGTT TTGATATCACCTATGAGGCTAATCTTTGAACTGACTGTGTGTGTGTGTGT ACGATTGTAATATTATATTGTCTTATCTTGTGCTATGCCTGTGACGTATT ATTGATAGGTGTGCATGCTCTGAGAAAGGGAGTGTCTGTCAGGTATCTCC GGACTGCGACGAGGTGAAAGCGCTGTGGAAACACATCGCTCACTGCCAGG ACAAGGCTTGTACCGTGAGTGTTACGTTGTACGGTAGCAGTTGCCCTATT AATAGTCTAATTCTTACGAAATAATAGAAAGCTTGCGTTCTGTATCTTGT GGACTCGTACAGCAGTATTACTACTGTACCTGCTGCTAAACCCAACCGGA GTATTACACTGTACTTCGTACCAAGTTCAGTACAAATTATAATATAATAT ACATATAATACGGTAAAGCGACGGATTCCCCCGGCATTAGGATAATTGCG GCATAGGCTACTAGCGGAACATTTTTTCTGTTTGCTTTTCGCGAGTATAT AAAAGTGCGGTACAGCAGTAGAGAGCGAGAGAATTCTCCCGGCAGGGTAA CTGTGCGGCATAGAGGAATAGAGGAATAGAGGAAGGCTACCTGGTGATAA CGGAACGATTTTATATTCGATTTTTGAATCTTATACACTGCCTTGGTAGA CAGCAGTTATTATTACATTTTGAAGAAAATACATCAGGTGCCAACATCTA TGGTAGATTTTATGTTGGTTTTCTAGCATCGCCACCCAAAATTCTCCCTC GGCAACCTGCCGCCGGTCCCGCCCGTTCCATTTCTGCGAAATTTCTCTAT GTGGGAAATCATATCCTGTTGTGTCTTACTTTTAAGGTACTCGTAATTGT ATACCTTACTCGTAGCGCATCTTAGTTTATAGGTACCAGTAGTAATTACT GTACTACATATGCGACCCTGTTAGCTCAGTAGGCACCTCGTAACCTTCTG ACACGTTGGGACGTGAGTTCGATCCCGGCAAACGGGATTTTTCTCACTAA AAACTAAAAAACCAAAATAAAAATGCCCAACGGGTGGAGAACGATTAATT CGTTAGTACACAAAATTCGACTTCACGGTCGACGAGGGAAAGGAATGGCT GAATCCTTCTCGCGACAAAAATCAAGGCACGCACCGCAGAAGGAAGGGGG ATGAAAAAGCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTC CAAGTTGATGTCCAGAATGGATGGGAAGAAAACACAAAACATGCACAGTA TGTATATTTGGTGAGTTATCGTACTGTAAAATTTGTAGAATAGGAATCGT ACGCCTCATACCAGGTAAAGCCCTAAATTATTTGTCTCGTTACCTGTATT CATTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGAGTATATTGCT GTATTACTACTCTATTTCTCAACACCACAGTTGACCACGAGACACTAGTA CTACAGATACTATTAATAAGACATTGCATGCACGTCCTTCGATACTTTGA ACAAACAGTGGGTGTGGGAAAACAGAGGCGCACATTACTTGGTCCGTGGT GATAACTAAACTAAGGCAGCACCCGCTATGGGAACTACCTTGAGGACTAC TGGCCCTGTGCCGTCGGGCTTTCGGCAGTGAACACCATTGGTACGCAATT TTGCGTGACGCGATAAACTCGGGACTGTCCCGATGGCGTATGTTTGTGTG TTTTCTTCCCATCCATTCTGGACATCAAGTTCGTTGGATGTACCAGCCGG GGTCACACAGGAGGAAGGTCACACAGGATTTCTCATCCACCTTCCTTCTG CGGTGCGTGCCTTAATTTTTATCGCGAGAAGGATTCAGCCATCCCTTTCC CTCGTCGATCGTGAAGTCGATTTTTGTGTACTAACGAATTAATCGTTCTC CACCCGGCATTTTTATTTTGGTTTTTAGTTTTTAGCCCGTTTGATCGAAC TCATCCCAACGGAGAATGAGCTGGCTGGCGCTGCCGCGGCGGGAGGAATC CCGTAAGTAAGCACCAGATTCAGCCTGAGTATGGAGAATGAGCTGGCTGG CGCGGGGCGGGACGGTCTAACCCGTCTCGGGAGACCAAATTCTCAGACGC GAACGGGGAAAGGAAAATATTAATTCTCCCTGTTCAGCTGACTACGAGCA GGATTGGCAACCTTACCCGGTCCGTCGATACTCTGCTTCTAGGTGATGAC CCTGTTGTTGTTTTTGTCATTCCATTTATTCTGGGCATCAGACTTGTGGA CGCACCAGCGGGGGTCACACAGGATTTCTCAATTTTCCTTTTGCGGTGCT TGCCTTAATTTTTCTCGCGAGAAAAGGATTCAGCCGTCCCTTTCCATCGT CGACCGCGAAGTAGAATTTTTTGTGTACCCACGAACTAATCGTTCTCGAC TTGTTGGGCATGATAAGGAAAAATCCAAATTCGGGTGACTGCACCGATAA TCATCTCGCGTCCCAACGTCAAGAAGTTTCGTTGAGTAAATGGACCACCG GGGCGACCGATAATCATCCTCGCCCGAGTGAAGTAGTCGTTGAGTACCTC GCGATCGCAAGTGTGCCGATTAGTGAGTTCGAATCTTGACGTTTTTCTTT CCTTTTTCTTTCCTTTTTCTTTTTCAATTCTGACTTCCGTACTATAATAT TAGTAAAAAGCGTGAGAAAATAACTTGAGTACAGAAGCAAAGTTCGATTA TTCATTATAATACTTCGCGCGAGGTGTAATAAATAGTGCTAAATTAGCAT CTTGAAAAACATCGTAGGCAAGAACCTGGTAGAGAAGGAAAGTTCTTGTA ACCATACGTGCGTTACAGTATGAATATACTGATAATACTCTATCTACGAC TTATACTGATAATACGCTCAGGCCTATCGGCCGCGAGTGAGATGTACACC AATAAAACGAATCAAAGATACAAGGTAGAGTAAGTTTAGTACATCAGATA CACTATTAATACTATAGTGGCAGTGGTAGATGCTGTTGATTTTGATTGAT TGATTGAATTCTCACGTAAGCTGATGTCAAAAATCCAGCCCGTGGTCACA AGGTAGAAAGACACCATTCGGAAGGAAAAAAACATACGACATACCAGTAC TACATACAAGGAGAAAAACGTAATGGTACAAAGATACTCGGGAAAAGCGA AATGTCCCAAAATAAAAGGAAAAGAAAGAAACTCGTGTGGAATCAGGGCG CCTGCATTTCGAAGGACGATTGAACGAAGGGCCGCGGCTTCAGCGAAAGC ATAGAGATGAGTACGAAGCAAAACGTAACATCAGAGAAAGACGCCACGGC ATCTGCAAACCAAACGCCCGGAGGATACAAGTTCGCGCCAATTGCGGCTG GTCAACAAGGGCGAGCGAACCAGCACGAGCCCGCTTACCTTGGTCCTTAT CGTCACGTTCGGGCATACCACATGCCGTAATCCAGCCTTGGCTTTCGCTT CAGCAATCCATTTCGCCATGAAATGTTTCGCCTCTTGTTCTGCCGTTCTG CGCCATTCCCCCTCGTCCTGGGCTGCAGTCGTCCACTGGTCGGCGTTGAT GCCGAAATCTTTGAGGTTGTCCAGGAACACCCCATCCACCATTTTCCTGG CCCCCCACACAGCCCGCGCCCCCCACCATTTCTCCGAACATCATGCGCTT CGGCAGTCTCGTATCCTCCGTGCGCGCCACACATCCCGCAAACAAGATCC GCCTCCTGCGTAAAGTTGCCTCGATGCTCTCATTTCCCGTCTTGATAGGC GTGTCCAGATAAGAAATCGGGTGGTCGGCGCGCTTGTGCTTTCGCCAACC GATGCAGCGAGACAAGAACCTGTGGTGGACTCGGCGCAGCGTGTCGTAGT GGCACGCGCGCGGGCTCCACGTGACGAAGCCGTACAGCATTGTCTCGAGA ACCTAGGCTCTTAGCATCCGGGCTTTGAGCTCGAGGGGGGCGCTCGGTTG GTCGTACAGTTCGAAGGTGGACTCCCGGAAGCTGCACCGTGCGTTGTGTT TGCGCCGGTCGACCTCGATGGACAGGTCGGCACTGTGGTCGGCATTCCCC CCGAGGTATACAAACTCGTTCGTCTGATTGTTCACCTGGCCCGCTGCCTC TACGCTGAATATGACTGTGGACCCTGGTATCCTCTTCGCGCGTAAATACA TGATCTCAGTCTTGGCCTGGCCTCGCCGCGCACACGACCATGATCACCCC CATCAGCTTCCTCAGCTGCTCGGGTGATTGCTAGACGACCCCGGCATCGT CAGCGTAAAGCATGCCCCAAAGCGTCGCCAGGACCGACTCTCCGGCAGCT GCTTCCCCCCACCCTCTTGCCCCGTTTTCCTTCCTCAGGTGTACCAAAGC GTCCGCGGTGCCTTTGTCCGCCATAAAACGCGTGAAGGCCGCGTTTATAT CCGCCGTGAATATGTTGAACAAGAGGGGCGCGAGCACGCACCCTTGAAGG TCTTATTCTACAGCGAATCACTCCGAGCACACCCTGTCAACGAGCCGCAC GCATGCTCGGATGCCATCGTGGAATTGACGAATGGCTTGAGATCATTTTC TGTGGCACGCCCAAGCGGGCGAGTACTGTCCAGAGGAGGGTTCGATCAAC GGAGTCGTACGCTTCGGTAAGGTCGATAAAACATACACAGAGCGGAATTC GTTTCTTCCGCGCCAGCTCCTGTAACCGACGAATCACAAGCATCATATCG GCGGTAGAACGGTTCGGGCGGAAACCACTCTGTTCTTCCGTCGGGATTCC CACGCGCTCACAGTACCCGCTGAGGCGACGAGCGATGATCTTCAGCAGTA TCTTGCCGGCGTGCGCTACCAGCAAGATGCCCCTGTATTTGCCGTACTCT GTCCGATCCTTCTTTTTATGGAGTACCATGATGATGACATATTTCCACTG CTGCGACACCTCGCCCCCCTCCAAATACAAACGACGATATCGAGCAGTCT CCGGCGCAGGGCAGGATCACCGTTGAGGGTAATCTTGAACAGTTCAACGG AGACCCCGTCCGGTCCGATAGCTTGTCCGTCCACCAACGAGTAGATGGGG TTTGTCAGCTCCTGCATCATGCGCTACACTCCTAGCGGCATGTTCTCGGG CCACTGGTCAAGGCCTTCTGCGGTGTTCGGGTCAAGCCTCAGTGACTTGG CGTTGAGGAAAGTGTGGAACCACCGAACTCATCGTTCGCGGATGAGTTCA ATGTCCTTGTCTTTTGACGTATGCCGAGCTGGGGTCTATTCCCTTCCAGG TTCATCGCCTCGAGGTGCTTGTAGAAGCCGGCCTGGTCGCCTTCTCGAGC GCGTGTTTCGAGTTTGCGGAAAAAGCCCCAGAAGAAGCTCAGCATGGCAG CCTTGCGCACATTCCGAAGATTTTTTCCAGCCATCTTCACGGCCTTTCGA AGGGTGCTGTTGTGGGATTCTGCGCGTAGGTGCCTCCTTGCCTCCTCTCT TTGTTGTAATGCTGCGTTCATCTCATCTTCCCCACCGGACCCCGCGCGTC AACCCTGTGCTCCGCGCGAGCGCTTAGAGCGCGGTACCAGTTCGGCCGCA GTGGAAAGCATGACGTCGGCCATGTCGGTGGCGATGTCACTGATGCAGGT GCCATAGGGGATTGGTGGTAGTGCGGCAGCCATCGCATCCCCAACCTGGC ATCGATGGCTCGGGCCAGTCATCAACCGCCTAAGGTTGGCCAGCTTCGGA GTTTCCCTGGTACTGTGACTCTTCCTCCGGTTTGGTGCGAACCTGCGTGG GATGCGGACTTTCGCGTACACGAGATTGTGATCTGATTCTAGTGCCTATA AGGGGGGCCCGCGGACGTTAACGTAGCGGATGAGTCGGCGGCCCGCCTGC TTTGTCAGGATATAATCCAAACGTGCTTGACACTTGCAGCGGTTGGCGCT TTGGAACATGTAGAACACGCCACTGTTGGGGGTACACAAGAAAGTGCCCA GAAGAGCAAGCTTGTTGTCTTCTGCGAAACCCAGCAGTAGTTTGCCGTTT TCGTTGAGCACGTCTCGGCCACATGCGCCCAACACGTTGCTGCCTGCTTC TCCTTCGCCCTCACCGCTCTTCCCTGTCCTGGCGCTCGCCTCTGTTGAAA CAAAGACGTATTCCCGAGCGGGCACTGATGCTACGGTGCGGTTGAGAGGT GCCATGTATTTGGCCTTGTGCCCCTCCGGCGCTTCCTCGGTCGGGGAGTG GGCTACCACGAACGTAACGAAGTTTGATTTAATCGAAATTCGGGCCTTCA GGAGGGAGACGTGCGCTGATGCACTCGATTGCGATGCCGTTCTCATCAGC CTTTTAAATGATCTCCTTTATCGCCAGTCCAACCCCCATGTTGCTCTTTC CTGCCTTAAAAGTTTGACTCCGCTCCAATCACCGCTGAAAAAGACGCGGT ATCCCGATGCCACAATTTCAAACGTTTCCTCCCTTTCGTGTACCAGCATG AAATAAATGCATGCAATGTTCCTACTAGTCCAGGCCTTCTTATATGACTC ATCCTCGAGCCTCCAATCTCTGCCTGCTCAAAACCTACCGCGAAGATACC GGTACTTTTAGACTCAATCTTCCCTTTCCACTTTTTTCGTTTCGTCTTCA AAATGAAGATAATTCTGGAAATGTATTATATAAATGTACTATAATAAAAA AACCATAGTCTAGTGCCCCCTTACACTACTACTCCGCTCCGTTTGTCCCG CCTTTCTTAATCTGTCTTATTAAATGGTTGGATTCGCCTGATGATTATCT TAAAACTAAATTATGTACTCTTTCTTCCCTGTTAAATTATAATTTAGTAT TCATTGTGTTGATACCTGTGCGACTTTTTTACAATCGACTCCAATTCATC AATACTTACACCCGACCTCAAATCTGACGCAACGTAACTGAGTCAAAGTG TATCCATGTTCATGATGTGATGTTGTCTTCGTTGTGGTGTGCCTGAATGG CGATTACAGTAGAACGATGGGTTTCTTCCTGATATTGAACTACTGTTGAC CCCTTGCAACAACATCGGGGAAGCCATTTATTCCCATGAAGTGATTTTGT CCTTAGTCATTGTTCCCACCTAAACGTTTTGACACTGTGGATGCTCGTAA CCACATGGTTAAGACGCGTTGGTTGATATTTTGTTTAAACTAGTAGGGTA CTGTATAGACTATGACAGCAGAGGAGTGCAGGAAGGTTACATACTCGCAC AGGTATGTACTACTGTTTGTGTTCTTTCGAGTTTGATAAACCACCTGTAC AGTACTTTACATACTTTACTTTGAGTACTCCACTCATACTGAAATATAAC CATGCTTTTGGGAATCTAGACTAAGCCACGGTCTTGTTGTGCCTCCGTCC GTCTCTGGCCTATATATCCTGGTGTGTCTGTGTGCCTGTGTGTCCGGTCT ACAGAGACCGCACTGCGAATCCTCCCGCTTCGTCCTGAAACACTACAGTC GTTGCAGGCATCGCGAGTGTCCTCTGTGTGGCCCCGTGAGGGCAGTCATC GCCAACGCGCGCCGGCAAAGGAGGGAAGAGTCCAACGGGGGGGAGGCGCA GGAGGGCGAAGGTCACGAGGATAGCGACGAGGACATGGAAGACTTCGAAG ATCGTGATGGCGATGGTGATAACGTTGACGATGATGATGACGACGACTTG TAGAGTGCCAGCGTAGCTCTAGCCCAACTGCTCCTTTGCACCTACTTATT AATTATGAAAATGGTTGATTGGGGGGAAAAAAACTCTTCTTTTTTCGCAC GTTGATTCATCGTCAGCTTGGCATTTTTAACGTTCGGACCAAGAATAGCG ATTAAAATGTATACTAATTATATAATACAGTAACAGATGGCGACGGTGAT GAGCTGTGGGATACCAGCATGGACCTATTTACAGTGGATACTGATTTGGT TCTAAGCTCTGGGTTTTGACTCACCCTCATCCTGATAATTTACTATCGGC GGGCGGTTTTTAAGTCCGGTATACAATCACGAATACCAGTATAGGTACAG AGCTTATAACTCATGTATAATAATACCTGGTTTAGAGCGTCAGCTCCACC TGTAGCTCTATAGAGTAATATACTGTAGTCATGATGCGTGTACCCAATAA TATGTTAATATGTTGAGGACAGAATTATGTTAGGGATATGAGTTTGATTT GATTTTGAGTTTGTCCTGTCGGGATATATTATTATATTACCAAACGACGG TTTTTACGTTTGTTTGGATTGGAAAAAGGGCAAGTCTTCTGTCCCGTGAG GGTCCAATGAAAACGGCCAACGGGGGTTTCCACAACTTGCTTGGCTTTTT GTGTGGCTCACTGGTGTACCGTACGAAGGAGAAAATCTGAGATCTGGAGC TACTTTAGAGCGGTAGCTACCACGAGTCTGCGGGAGATTTCTTCCTTTCT TTGTTCTTGTGGTGTGATTTGTGGCTTTGTTTCCAGCAACGAATGCAGTA GCTGCTGCTATAGTTAGCACTGCCGTTCAGATACATATACCAGGTACGTT AAACAGTTGTTCGGAAGGAAAGCGGTTATCCCCTTGAGGTCTACCGGGTA CGAGCATATGTTCGAGTTTAGCGTGCATTTTACTTGCCGCGCATAAGGAA GGCTCGATCTGTTTTGAGACTCGCCAACGAACACGGTGAGCATGCTCGTA TGTACATTCAGTAGATCGTTGGCGGATAGATGCTATTAATAGTGGCATTT TATGTTGCGCCGTATCAGTCTCTAGGGGTCTGTTCACATAACAGACGGCA GTTGTGCAGGAAGTAGTCTATACACTTAATCTACCTTCGTCGTGTGGTGT CTTCACCCCTGTTTTTCAGACGTTTTCTGTCGTATCACTACGTATGAATA ACTGTAGTATTCGGCATGGTTTGAAATCGTTCCGGGGAGAGATAATCTGA ATTTTGAATTTTGACGTCGATCAGTATTATACTGTTGACCCTACCTGGTA TGTGACTAGTATTGGGGAACCCATATAATACCATGAAGAATTTTTGTCCC TACACAGAGTACAGCCAATGATGTTCCCATCTAAGCCTTTTGACATTTTT CCCCCGAGGGACTAGATGCGTTCAGATTTTTCTTCAGAAACCATGTGTGA CGAGGAGGACGATCCCGGACACTATTAATTAGGATCGATGCCCTATTGAT GGCAAAGCACGGGCGAGGGAGGTCTCTTTCGGC
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig847:295502..308084-

>mRNA_F-serratus_M_contig847.19853.1 ID=mRNA_F-serratus_M_contig847.19853.1|Name=mRNA_F-serratus_M_contig847.19853.1|organism=Fucus serratus male|type=CDS|length=840bp|location=Sequence derived from alignment at F-serratus_M_contig847:295502..308084- (Fucus serratus male)
ATGGACCGAAAGATGGACCGAAAGGCGGCCCTTCGGCAGCAACAGAAAAG
ACTTCTACTCTTAAGACACGCCAGCAGGCGGCCCTTCGGCAGCAACAGAA
AAGACTTCTACTCTTAAGACACGCCAGCAGGTGTGCATGCTCTGAGAAAG
GGAGTGTCTGTCAGGTATCTCCGGACTGCGACGAGGTGAAAGCGCTGTGG
AAACACATCGCTCACTGCCAGGACAAGGCTTGTACCGTGTGCATGCTCTG
AGAAAGGGAGTGTCTGTCAGGTATCTCCGGACTGCGACGAGGTGAAAGCG
CTGTGGAAACACATCGCTCACTGCCAGGACAAGGCTTGTACCAGACCGCA
CTGCGAATCCTCCCGCTTCGTCCTGAAACACTACAGTCGTTGCAGGCATC
GCGAGTGTCCTCTGTGTGGCCCCGTGAGGGCAGTCATCGCCAACGCGCGC
CGGCAAAGGAGGGAAGAGTCCAACGGGGGGGAGGCGCAGGAGGGCGAAGG
TCACGAGGATAGCGACGAGGACATGGAAGACTTCGAAGATCGTGATGGCG
ATGGTGATAACGTTGACGATGATGATGACGACGACTTGTAGAGACCGCAC
TGCGAATCCTCCCGCTTCGTCCTGAAACACTACAGTCGTTGCAGGCATCG
CGAGTGTCCTCTGTGTGGCCCCGTGAGGGCAGTCATCGCCAACGCGCGCC
GGCAAAGGAGGGAAGAGTCCAACGGGGGGGAGGCGCAGGAGGGCGAAGGT
CACGAGGATAGCGACGAGGACATGGAAGACTTCGAAGATCGTGATGGCGA
TGGTGATAACGTTGACGATGATGATGACGACGACTTGTAG
back to top