mRNA_F-serratus_M_contig846.19840.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig846.19840.1
Unique NamemRNA_F-serratus_M_contig846.19840.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: D7FUK2_ECTSI (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK2_ECTSI)

HSP 1 Score: 307 bits (786), Expect = 1.780e-91
Identity = 209/450 (46.44%), Postives = 249/450 (55.33%), Query Frame = 1
Query:    1 RTLKQWRAEQLTLSELEFEWIRQFYVQGQAHYDLRSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRAKKAXXXXXXQRQAVEAVGGRAAFVVMAEALRERADRRRLWKEREADKVFKRLPEDGRPLACPLFSENAAPSPLPGTPHELRGLADTVLRWGSTYAGE-----------KEAGVSYAGGVCAG------------RSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVEGNSSKGSG---NGCGSESLSVAPP--WQTGRFALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMESQPGRDGVSALGDTVEAFSHGLSVLGRVVFKSSEAYTSQKAWARDEPRHLVP--------PSSAAYGWSPPPRRVYGWTVGEVTAYPKPRAVRRMQRAFRSLFEVE 1242
            RTLKQW+ EQLTL+ELEFEWIRQFYVQG+AH+ L SWWH P+ +LL  W++LE KT  V++TLQGA+E+  D                   + +R KKA      QRQAVE++GGR A+  +A+AL +RA++RR W ERE DK                                L  LAD VL WG  ++GE           +EAGV   G   +G              A  A  G  G  N  D  E  ES                  G SS  S    +  G+ES   APP  W+TGRFALEMQ+PWS+RLL+GEKTVETR Y LP GL+GR IEV+ES  GRDGVS +GD VEAFS GLSV+GRVVF  +EAY S++AWA D  RHLVP         S   YGW  P   V+ W V  V AYPKPRAVRRM R FRSLF VE
Sbjct:  394 RTLKQWKTEQLTLAELEFEWIRQFYVQGRAHHALHSWWHGPLQELLRFWSLLEAKTAVVVNTLQGAAESRFDHXXXXXXXXXXXXXXXXXXDDKREKKARQKRAKQRQAVESLGGRDAYSAIADALGDRAEKRRQWAEREKDKA-------------------------------LSALADAVLEWGKIFSGEDGVRGGGIVVAEEAGVGGGGRRVSGGCXXXXXXXXXXXPAGVADSGAGGVDNGPDGQEPCESST---------------SGGSSLPSPLVTSPAGTESARHAPPTPWETGRFALEMQAPWSRRLLDGEKTVETRGYPLPEGLVGRSIEVLESGRGRDGVSGVGDVVEAFSAGLSVVGRVVFGGTEAYPSREAWAADAERHLVPVPAEEEGSESGKGYGWKGP-GSVHAWRVASVEAYPKPRAVRRMGRVFRSLFLVE 796          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A448Z616_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z616_9STRA)

HSP 1 Score: 163 bits (412), Expect = 3.140e-40
Identity = 145/443 (32.73%), Postives = 201/443 (45.37%), Query Frame = 1
Query:   10 KQWRAEQLTLSELEFEWIRQFYVQGQAHYDL--RSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIA--DESHGAKDKASEEDSQAATEERRRAKKAXXXXXXQRQAVEAVGGRAA--FVVMAEALRERADRRRLWKEREADKVFKRLPEDGRPLACPL-FSENAAP---------------SPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSYAGGVCAGRSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVEGNSSKGSGNGCGSESLSVAPPWQTG--RFALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMESQPGRDGVSALGDTVEAFSHGLS-VLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSP-PPRRVYGWTVGEVTAY----PKPRAVRRMQ---RAFRSLFEV 1239
            K WR+EQL L+E+E EWIRQFY+QG  H+ L    +W  PM +LL  W+ LE +T   +  L+ A+E     D  +G + K ++ + +A   +RRR           R  +          ++  AE L  RA  R LW +RE D VF  +P D RP+  PL F +  A                SPLP +P ELR LA  + R G  Y                 R   AA      D ++R     T S+   +G  R +                          P W      F LE+Q PW+  + NG+K ++ RSYALP  LLG+ + ++ES  GR GVSALG+ +     G + V+G  VF S +AY +  A+  DE  HLV P +  YGW     +  +GW VGE   +    P P     M    R FRSLF++
Sbjct:  438 KLWRSEQLLLTEIESEWIRQFYIQGTGHHKLLWEPYWKNPMKELLSIWSQLEARTKQTMDLLRAAAEGKCGLDAGNGTETKPTKAERKA--RDRRRKALGTIRDLVSRIHIHNDDETVTELYLPFAELLEARAAMRELWGKREKDHVFHEMPPDCRPMEVPLRFGDQTAAHRSSGAAERDGSTGNSPLPASPAELRELAKQLARCGKAY-----------------REGNAALLPPPWDTDERKPPSPTPSIEKKDGSPRDHHA-------------------KPMDWPGWDADGTTFGLELQQPWAGFVANGKKAIDVRSYALPPALLGKKVMIIESASGRAGVSALGNRLRLTGGGTTRVIGWCVFSSVKAYETGAAFRADERLHLVAPDNP-YGWKDGTTKNAFGWVVGEHHRFGESSPAPSGAAAMGSGIRRFRSLFQL 841          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A1E7EVX5_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7EVX5_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.390e-35
Identity = 132/423 (31.21%), Postives = 199/423 (47.04%), Query Frame = 1
Query:   16 WRAEQLTLSELEFEWIRQFYVQGQAHYDL--RSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRAKKAXXXXXXQRQAVEAVG------GRAAFVV----MAEALRERADRRRLWKEREADKVFKRLPEDGRPLACP-----------LFSENAAPSPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSYAGGVCAGRSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVEGNSSKGSGNGCGSESLSVAPPWQTGR-----FALEMQSPWSKRLLNGEKTVETRSYALPAGLLG-RPIEVMESQPGRDGVSALGDTVEAFSHGLS-------VLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSPP--PRRVYGWTVGE 1170
            WR+EQL L+E+E EWIRQFY+QG  H+ L   S+W  P+ +LL  W+ LE +T+  +  L+ A+E          +KA+++ ++A  + R R KK+       R+ V  +       G  AF      MAE L ERA+ R  W++RE D VF  LP D RP+  P           + +E  A SPLP +P +L+ +A  +L+ G  Y                            GDA         E         +++ +    EG+S+         +  S    W         F LE+Q PW+  +++GEK +ETRSY+LP  L+G   + ++ES  G+ GVS+L + V+  +           V+G   F S + YT+++ +  +E  HLV P S  YGW       +VYGW VGE
Sbjct:  425 WRSEQLLLTEIESEWIRQFYIQGMGHHQLLWESYWKDPIQELLSIWSRLEHRTEQTIELLRAAAEGKCGVGMNT-EKAADKPTKAERKARDRRKKSLASI---RELVSRINETPEEDGATAFTELYQPMAELLEERAEMRSKWEKREKDHVFHELPLDYRPMKVPFKFERTIDENNIGNEYVATSPLPNSPDKLKEIAAQLLQLGRAYRN--------------------------GDAKQLPPPWKKEKP-------KQDAL---AEGDSTV--------DDHSKPLDWSGWNACAQLFGLELQHPWAAAIIDGEKVIETRSYSLPPSLIGGTKVMIIESSSGKAGVSSLCNHVDFSTSSRKKGTGNSKVIGWCTFISVKTYTTKQEFQAEENLHLVTPDSG-YGWKDDGSTEKVYGWIVGE 798          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A7S4EG83_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EG83_9STRA)

HSP 1 Score: 149 bits (375), Expect = 2.510e-35
Identity = 131/448 (29.24%), Postives = 207/448 (46.21%), Query Frame = 1
Query:   10 KQWRAEQLTLSELEFEWIRQFYVQGQAHYDL--RSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRAKKAXXXXXXQRQAVEAVGGRAA-------------FVVMAEALRERADRRRLWKEREADKVFKRLPEDGRPLACPL-FSENAA-------------PSPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSYAGGVCAGRSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVEGNSSKGSGNGCGSESLSVAPPWQTGRFALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMESQPGRDGVSALGDTVEAFSHG---LSVLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSPP-PRRVYGWTVGEVTAYPKPRAVRRMQ----RAFRSLFEVE 1242
            K WR+EQL L+E+E EWIRQFY+QG  H+ L   ++W  P+ +LL  W+ LE +T   +   + A+E       GA   ++ ++++    E++  K        +++A+  +    +             +   A+ L ER + R LW +RE D VF  +P D RP+  P  F E  A              SPLPG+P +L+ +A  +++ G  Y     A +         +S+                   TES+  D   +  N  G G              SE++          F LE+Q PW+  +++G+K +ETRSY LP  L+G+ I ++ES  G  G+S LG+ V    H    + V+G  +F S + YT+ K +  +E  HLV P S  YGW     ++VY W +G    Y +  +   +     R FRSLF++E
Sbjct:  480 KIWRSEQLLLTEIESEWIRQFYIQGSGHHKLLWETYWKNPIKELLSIWSQLEGRTKQTMDMFRAAAEGKC----GADGTSNNDNNEGKAVEKKPTKAERKARDRRKKALGTIQELVSRININDDNILTELYQPFAKLLEERGEMRELWGKREKDHVFHEMPPDCRPMDAPFRFEEQYAVHDPSGVGSDLFGKSPLPGSPVKLKEMARQLVQCGRAYQQSNFALIPPPWMTNKPKSSRPIE---------------TESL--DRHTKPMNWSGWGA-------------SENI----------FGLELQHPWAGAVVDGKKLIETRSYTLPPSLIGKKIMIVESTSGEAGISTLGNCVSLSGHEGARIKVIGWCIFSSVKTYTTGKDFRAEEKLHLVTPDSG-YGWKDGVTQKVYSWIIGNYHRYNESSSDVDLNFSGVRRFRSLFQLE 882          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A7S1ZAA8_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZAA8_9STRA)

HSP 1 Score: 141 bits (356), Expect = 4.200e-33
Identity = 136/470 (28.94%), Postives = 199/470 (42.34%), Query Frame = 1
Query:   10 KQWRAEQLTLSELEFEWIRQFYVQGQAHY-DLRSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRAKKAXXXXXXQRQAVEAVGGRAAFVVMAEAL----RERADRRRLWKEREADKVFKRLPEDGRPLACPLF-------------------SENAAPSPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSYAGGVCAGRSAAAAARGEAGDANDRDHAEGTESM-----------------VGDEGDRRKNGIGDGVEGNSSKGSGNGCGSESLSVAPPWQTGRFALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMESQPGRDGVSALGDTV-------EAFSHGLSVLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSPP-PRRVYGWTVGEVTAYP-------KPR---AVRRMQRAFRSLFEVE 1242
            K WR+EQL LS++E EWIRQFYVQG AH  +L   W   M  LL  W+ LE +T   +  L+ A+E   D    A          +  E + R K+               GG +A  ++ E L     ERA  R LWK+RE D VF+R+ ++ +PL  P                     +E    S L G+P +LR LA+ + +WG  Y     A +                        + D+   T                    + D  +  K+    G                       W   +F LEMQ PW+  LL+G KT+ETR+Y LP  LLG+ IE++E++ G+ GVS++G+ V       E  +  +  +G  VF     Y  ++ +  DE +H+V   S  YGW     +++YGW VG+   Y        KP     + R+ R  RSLFE++
Sbjct:  177 KVWRSEQLLLSDMESEWIRQFYVQGAAHRSNLWKAWGEFMLSLLRYWSQLETRTKQTIDLLRYAAEEQCDFGGCASSNEPNNVVPSRAERKLREKRKKALSTVDDILKRGGGGNSADQILYEPLAILLEERATMRHLWKKREKDHVFRRMNDEDKPLPVPFTFEVTNVEEMIANKKAGMKKNEEMGYSSLGGSPEQLRCLANNLRKWGKAYMSCDSADLPAV-------------------FENDDNITSTXXXXXXXXXXXXXXXXXXXTIDDTNEHTKDLDWKG-----------------------WNNQKFGLEMQHPWAGHLLDGRKTIETRAYDLPPSLLGKRIEILETRKGKAGVSSVGNVVSYVGGEEEKDAAIVKNIGWCVFDRIIVYEDRETFESDEGQHMVLKDSG-YGWKDGHTKKLYGWVVGKCMRYEDKEEGSCKPGDIPPISRLVRRLRSLFELQ 603          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A836C862_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C862_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.500e-29
Identity = 139/483 (28.78%), Postives = 189/483 (39.13%), Query Frame = 1
Query:    1 RTLKQWRAEQLTLSELEFEWIRQFYVQGQAHYDLRSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRA------------KKAXXXXXXQRQAVEAVGGRAAFVVMAEALRERADRRRLWKEREADKVFKRLPEDGRPLACPLFSENAAPSPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSYAGGVCAGRSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVEGNSSKGSGNGCGSESLSVAPPWQTGRFALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMES------------------QPGRDGVSALGDTVEAFSHGLSVLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSPPPRR----------------------------------------VYGWTVGEVTAYPKPRAVRRMQRAFRSLFEV 1239
            RTLKQW A+Q  LSELEFEW+RQ++VQG AH    +WW  P+ +L   W  LE +T  VL+TL  A+                                         KKA          V+A+GG   +  +A AL +R  +R+ W  RE+D VFK +P   RPL  PLF+  AAPSPLP    +   LA  V  W   +AG + A +  A                                                             +E  +VA      R  LE+Q+PW++ LL+GEK VETR+YALP  L+GR + ++ES                         SA+ D V A + GL+++G V F    AY ++ AW  +   H V   S  + W+    R                                        VYGW V  V A  +PR+V  M R  RSLF++
Sbjct:  395 RTLKQWLAQQALLSELEFEWLRQWWVQGAAHARAHAWWAAPVERLTLHWRALEERTSTVLATLLRAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQKKARQRRLKALATVDALGGENVYGAIAAALDQRWQQRQGWAARESDAVFKTVPRHARPLRIPLFTA-AAPSPLPP---DCAALAARVRAWADCFAG-RAAALPAADAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEDWAVAD-----RVGLEVQAPWARMLLSGEKRVETRAYALPPELIGRKLALVESCGTAAXXXXXXXXXXXXXXXXXXVTSAVPDAVRAGAAGLTIVGSVTFGECRAYATEAAWLAETALHRVARDSP-FSWAAAAARMRLGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCAPVYGWVVSAVKARKRPRSVPAMTRLMRSLFQL 866          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A7S3Q6H3_9STRA (Alpha-ketoglutarate-dependent dioxygenase FTO n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q6H3_9STRA)

HSP 1 Score: 127 bits (318), Expect = 6.690e-28
Identity = 131/482 (27.18%), Postives = 207/482 (42.95%), Query Frame = 1
Query:   10 KQWRAEQLTLSELEFEWIRQFYVQGQAHY-DLRSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRAKKAXXXXXXQRQAVEAVGGRAA------------FVVMAEALRERADRRRLWKEREADKVFKRLPEDGRPLACPL---FSENAAP-------SPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSYAGGVCAGRSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVEGNSSKGSGNGCGSESLSVAPP---------------------------------------------WQTGRFALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMESQPGRDGVSALGDTV--EAFSHGLSVLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSPPPRRVYGWTVGEVTAYPKPRAVRR-MQRAFRSLFEVE 1242
            K WR+EQL LS +E EWIRQFY+QG+ H  +L  +W +PM QLL+ W  LE++T  VL  L  A+ A   E H       E  S+A  ++R + KKA          VE +  R A            +  +   L ERA  R LW +RE + VFK +  +  PL  P      +NA         SPL GT  +L  +   +      +       +     V      A + R      +  +  +   S+V ++ ++ K  +   ++             E L+                                                 W++ +  LEMQ+PW ++LL+G K +ETR+Y LP  L+G+ I++++S+ G+D VS L + +  E  ++ +  +G  +F   E Y  +  +  DE +H V  SS  YGW+     +YGW V +   Y K R   + + R  RSL+E++
Sbjct:  455 KLWRSEQLLLSNIESEWIRQFYIQGEGHKKNLWKYWEQPMCQLLNYWGQLEKRTKQVLDLLTNAAFARCGE-HEKNKTNGEPPSKAERKQREKQKKALAT-------VEDLIRRTAGGSNIDDPTEILYQPICVLLEERAKMRSLWTQRENEGVFKGMESEYWPLDVPFKFDHLDNAKSADKEVGISPLGGTSKQLTKICQELKMCARAFLSRDGNHLPAMKTVLVASQQADSTRSPEPLQSSSNDEKREGSVVKEKREKDKELLTKKID----------EVKEPLAATQQXXXXXXXXXXXXXXXXXXXXXPAIPLIKRPRTTESDHRKDLDWKGWKSVKIGLEMQNPWGRKLLDGTKAIETRAYDLPKSLIGKKIDILQSKGGKDCVSGLSNVMVGEEITNAVQPIGWAIFARVEVYRYKGKFIADEKKHCVEQSSN-YGWNDDTNVIYGWVVSKCGRYGKKRKKAKVLLRRMRSLYEIQ 917          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A7S3UV07_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV07_HETAK)

HSP 1 Score: 116 bits (290), Expect = 4.780e-26
Identity = 72/162 (44.44%), Postives = 98/162 (60.49%), Query Frame = 1
Query:    1 RTLKQWRAEQLTLSELEFEWIRQFYVQGQAHYDLRSWWHRPMNQLLHQWTMLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRAKKAXXXXXXQRQAVEAVGGRAAFVVMAEALRERADRRRLWKEREADKVFKRLPEDGRPLACPLFSE 486
            +TLKQWR+EQ  L+ELE EWIRQFY+QG+AH  L  WW RP+ +L   W  LE +T  V++ L GAS A++ E+ G         S    ++R++  K        ++ +E   G+A  V+ A AL ER   R  WKERE DKVFK++ ++ RPL CPLF E
Sbjct:   18 KTLKQWRSEQAMLTELESEWIRQFYIQGEAHRRLHPWWARPVAELCALWGRLEARTGQVVAVLVGASLAVSSEAQGPVGDLGVRPSGDERKKRKQRDKIFKHLSTVKE-MEQYSGQAYEVIHA-ALEERQKMRLGWKERERDKVFKQVAKEDRPLPCPLFEE 177          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A7S1VWD6_9STRA (Hypothetical protein (Fragment) n=2 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VWD6_9STRA)

HSP 1 Score: 110 bits (274), Expect = 2.520e-23
Identity = 97/315 (30.79%), Postives = 134/315 (42.54%), Query Frame = 1
Query:  355 FVVMAEALRERADRRRLWKEREADKVFKRLPEDGRPLACPL-----------FSENAAPSPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSYAGGVCAGRSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVEGNSSKGSGNGCGSESLSVAPPWQTG------RFALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMESQPGRDGVSALGDTVEAFSHGLSVLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSPPPRRV-YGWTVGEV--TAYPKPRAVRRMQRAFRSLFEV 1239
            F   A+    RA  R  W +RE D  F+ L +   PL  P+                A SPL G+P +LR  A  +   G      +E                            +D  E ++  V                            S   SV   W TG      RF LEMQ PW++ LL+G KT+ETR+Y LP GLLGR I++++S+ GRDGVS+LG+ ++  +  +  +G VVF     YT+Q+A+  DE +H+V   S  YGW     RV +GW V EV      +P       R  RS FE+
Sbjct:   69 FEAFAQHFDGRATMRERWVKREKDHAFRELDKSSHPLHLPIEFGAVVGQSKAILGGVARSPLAGSPSDLRNAAKRLRLCGKAMESGEE----------------------------KDLPEPSQPPV-------------------------ATVSTQPSVGSEW-TGWSSISRRFGLEMQDPWAEHLLDGTKTIETRAYDLPVGLLGRRIDILQSERGRDGVSSLGNHIQLGTD-VKYVGWVVFDRVIRYTTQEAFEGDEAKHMVHRDSG-YGWKDGKTRVLFGWVVREVGRRTMSRPSDGGSATRRMRSFFEL 327          
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Match: A0A7R9TQN8_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7R9TQN8_MICPS)

HSP 1 Score: 100 bits (249), Expect = 2.360e-19
Identity = 58/145 (40.00%), Postives = 85/145 (58.62%), Query Frame = 1
Query:  829 FALEMQSPWSKRLLNGEKTVETRSYALPAGLLGRPIEVMESQPGRDG----VSALGDTVEAFSHGLSVLGRVVFKSSEAYTSQKAWARDEPRHLVPPSSAAYGWSPPP---RRVYGWTVGEVTAYPKPRAVRRMQRAFRSLFEVE 1242
            F LEM+ PW+  +++G KT+ETR+YALP  LLG+P+ ++ +   +DG    VS+LGD  +  +   +++  V F S + + S K WA D  +HLVP    A+ W       RRV GW VG+V     P    +M RA RSLF++E
Sbjct:  268 FGLEMKQPWADLVVSGAKTMETRAYALPPRLLGKPVALLRTPAAKDGEPANVSSLGDACDPGA--ATIVALVTFTSVKEWDSAKDWAADGDKHLVPSDDEAFRWRRGDGLRRRVRGWIVGDVAPI-APTPSPKMTRALRSLFKLE 409          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig846.19840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUK2_ECTSI1.780e-9146.44Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
A0A448Z616_9STRA3.140e-4032.73Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A1E7EVX5_9STRA2.390e-3531.21Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7S4EG83_9STRA2.510e-3529.24Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7S1ZAA8_9STRA4.200e-3328.94Alpha-ketoglutarate-dependent dioxygenase FTO (Fra... [more]
A0A836C862_9STRA1.500e-2928.78Alpha-ketoglutarate-dependent dioxygenase FTO n=1 ... [more]
A0A7S3Q6H3_9STRA6.690e-2827.18Alpha-ketoglutarate-dependent dioxygenase FTO n=2 ... [more]
A0A7S3UV07_HETAK4.780e-2644.44Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S1VWD6_9STRA2.520e-2330.79Hypothetical protein (Fragment) n=2 Tax=Grammatoph... [more]
A0A7R9TQN8_MICPS2.360e-1940.00Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig846contigF-serratus_M_contig846:341946..350823 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.7
Seed ortholog evalue6.5e-83
Seed eggNOG ortholog2880.D7FUK2
Preferred nameFTO
KEGG koko:K19469
Hectar predicted targeting categoryother localisation
GOsGO:0001659,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0006139,GO:0006259,GO:0006281,GO:0006304,GO:0006307,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007275,GO:0008150,GO:0008152,GO:0008198,GO:0009451,GO:0009888,GO:0009987,GO:0010883,GO:0016070,GO:0016491,GO:0016604,GO:0016607,GO:0016705,GO:0016706,GO:0031974,GO:0031981,GO:0032451,GO:0032501,GO:0032502,GO:0032879,GO:0033554,GO:0034641,GO:0035510,GO:0035511,GO:0035513,GO:0035514,GO:0035515,GO:0035516,GO:0035552,GO:0035553,GO:0040008,GO:0040014,GO:0042127,GO:0042245,GO:0042592,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043576,GO:0043734,GO:0044057,GO:0044065,GO:0044237,GO:0044238,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044728,GO:0045595,GO:0045598,GO:0046483,GO:0046872,GO:0046914,GO:0048513,GO:0048638,GO:0048731,GO:0048856,GO:0048871,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051213,GO:0051239,GO:0051716,GO:0055114,GO:0060612,GO:0061448,GO:0065007,GO:0065008,GO:0070013,GO:0070344,GO:0070350,GO:0070988,GO:0070989,GO:0071704,GO:0080111,GO:0090304,GO:0090335,GO:0140097,GO:0140098,GO:1901360,GO:1905952,GO:1990931
EggNOG free text desc.RNA N6-methyladenosine dioxygenase activity
EggNOG OGs28IRR@1,2QR31@2759
EC1.14.11.53
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons4
Model size1242
Cds size1242
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig846.19840.1prot_F-serratus_M_contig846.19840.1Fucus serratus malepolypeptideF-serratus_M_contig846 341946..350823 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932492.5826502-CDS-F-serratus_M_contig846:341945..3427581622932492.5826502-CDS-F-serratus_M_contig846:341945..342758Fucus serratus maleCDSF-serratus_M_contig846 341946..342758 -
1690964335.2458901-CDS-F-serratus_M_contig846:341945..3427581690964335.2458901-CDS-F-serratus_M_contig846:341945..342758Fucus serratus maleCDSF-serratus_M_contig846 341946..342758 -
1622932492.5991502-CDS-F-serratus_M_contig846:345300..3455031622932492.5991502-CDS-F-serratus_M_contig846:345300..345503Fucus serratus maleCDSF-serratus_M_contig846 345301..345503 -
1690964335.2708645-CDS-F-serratus_M_contig846:345300..3455031690964335.2708645-CDS-F-serratus_M_contig846:345300..345503Fucus serratus maleCDSF-serratus_M_contig846 345301..345503 -
1622932492.623527-CDS-F-serratus_M_contig846:346807..3469641622932492.623527-CDS-F-serratus_M_contig846:346807..346964Fucus serratus maleCDSF-serratus_M_contig846 346808..346964 -
1690964335.2824898-CDS-F-serratus_M_contig846:346807..3469641690964335.2824898-CDS-F-serratus_M_contig846:346807..346964Fucus serratus maleCDSF-serratus_M_contig846 346808..346964 -
1622932492.6388042-CDS-F-serratus_M_contig846:350754..3508231622932492.6388042-CDS-F-serratus_M_contig846:350754..350823Fucus serratus maleCDSF-serratus_M_contig846 350755..350823 -
1690964335.2929308-CDS-F-serratus_M_contig846:350754..3508231690964335.2929308-CDS-F-serratus_M_contig846:350754..350823Fucus serratus maleCDSF-serratus_M_contig846 350755..350823 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig846.19840.1

>prot_F-serratus_M_contig846.19840.1 ID=prot_F-serratus_M_contig846.19840.1|Name=mRNA_F-serratus_M_contig846.19840.1|organism=Fucus serratus male|type=polypeptide|length=414bp
RTLKQWRAEQLTLSELEFEWIRQFYVQGQAHYDLRSWWHRPMNQLLHQWT
MLERKTDAVLSTLQGASEAIADESHGAKDKASEEDSQAATEERRRAKKAR
QKRAKQRQAVEAVGGRAAFVVMAEALRERADRRRLWKEREADKVFKRLPE
DGRPLACPLFSENAAPSPLPGTPHELRGLADTVLRWGSTYAGEKEAGVSY
AGGVCAGRSAAAAARGEAGDANDRDHAEGTESMVGDEGDRRKNGIGDGVE
GNSSKGSGNGCGSESLSVAPPWQTGRFALEMQSPWSKRLLNGEKTVETRS
YALPAGLLGRPIEVMESQPGRDGVSALGDTVEAFSHGLSVLGRVVFKSSE
AYTSQKAWARDEPRHLVPPSSAAYGWSPPPRRVYGWTVGEVTAYPKPRAV
RRMQRAFRSLFEVE
back to top

mRNA from alignment at F-serratus_M_contig846:341946..350823-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig846.19840.1 ID=mRNA_F-serratus_M_contig846.19840.1|Name=mRNA_F-serratus_M_contig846.19840.1|organism=Fucus serratus male|type=mRNA|length=8878bp|location=Sequence derived from alignment at F-serratus_M_contig846:341946..350823- (Fucus serratus male)
CGGACCTTGAAGCAATGGAGGGCCGAGCAGCTCACGCTCAGCGAGCTCGA ATTTGAATGGATCCGTCAGGTAACCCATGGTGTATGTGTGTGTGTGCGTG GTAAGGGGTCAATCATAAATTGAATATAACCGTGCAAGCCGGCTCTATCA TCCTATTATTCATACAGTCATTCTATGCTACTCGCATTAGTCCTCCCATT ATTCATACAGTGTTAAGGGGTGTTAAGGGATCCATGATGCTTATTACGGT GTTTGTTTTTGTTTGTATGTATTGAATAAAGCATACATACAGCGAAGTTT GTTTCTTCCGCTCCAGCTCCTCTTACCGACGAACCACAAAGATCATACCG GTCGGTGGTAGAACGGGTTGATCGGAAACCACTCTGATCCTCTGGCAGGA TCCCCACGCGCTCGCAGTACTCGCTGAGGCGGCGAGCGATTAACTTCAGC AGTATCCTACCGCCGTGCGCTATCAGCAAGATGCCCTGTCGAACTACACA CAGCCGCAATCCAGCCCTGTCGTGCTCATCATTTTCTTAATAGCCTAGCA TAACTCGTTTTTACTCCCTCCAATGGCTAGTTGTGTCTATTTGTGTGTGT CTGTGTGTTTTGTTGTTGTTTTTTCATCTCACTTAAAGTCGATGGGCCCC TTAACGTTCCCATCTTGCCTTTTGGTCACTAAGGATCTTCCCATCTCTCC CTGGTTCACGCCTTACGAGTTTTTATCGCGATGCAGGTTCTGCAATCTTG CAACTCGTCAACCAATAGTTGAATATTACTTACTCACGATTTCCGCTGTG GACGCCAGAATAAAAATTCTGCTTTGGCAAGAATTGACCTCACGATTTCC GCACTAGCAGGTGTGTAGGTGACCTACTAGACCACTCGGGCGACGAGGGC ATTTACGTCTGTTTATTCTTATTATTACTTGTGTTGAGGCTGACCAATCG ACTAGCCTAGGTTATGTTGCCAGTCCCGCCCGTTATGATACAATTGCACC TCCGATACCTTCAACATGCCCACTTAATACCAATAATACTAATATTAGTA TAGTGGGTGTCGGAAAAGAGAGGCGTATATTAATTGGTCATAGTCCATGG TGATACCTGAATAGGCAGCACCCGTTACTGGAACTACCTTGAGGACTATG ACTACTGGCCCTGTGTCGGCGGACTCTCGGCAGTGAACGCCATCGGTACG CAATTGCGTGACCTGATAAACTCGGGACGAACCCGATGGCGTATGGCGGT ATAAATAAATGGACGCCGCCGTGGAACTCGGGAAGAATCCCGTGAGTAAG CACCAGATTCAGCCTGAGTGTGGAGAATGAGCAGGCTGGCGCGGGACGGG ACGGCCGAACCCGTTTCGCGAGGCCAAATTCTCAGGCGCGAACGGGGACA GGGAAATATTATTTTTCCCTCTCCAACTGACCGCGAGCAGGATTGGCAGC CTTACCCGGTTGATCCATACTCTTGCTATATGTGAAGAGCATACATATTC GATGAAAATAGATACGTACTCATACTCATATACAAGATAAGAAACAAAAA AACGCCTCTTTGACTCTTGAGCGGTAAGAAACGGTAGAAAATGTCAGGAA AACAACCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCCCCACCCCCCACC CCCCCCCCCCCCCCCCCCCCGCAAAAAAAGGTAAAAAAGTACCAAGGCGT TGGGACAAAAGTTGTCCCTCCTTACATGGAACTCCATTATCACAGCGGTT AAGTTTCCGCTGAAACTTGGGACATGAACCCTAAACAGTGAATTATTATG CTGTTCCCTGAAGTAAACAATGCACCCTGCTTTGGCAGAGGGCGTAGATA TTTCATGTCCCGAATTTTGCTCCCCTTTGGTTCTAAGCACGGTTTTGGAG CATGGCGTAACGTCACGAAAGAGGTTTCCCCCCCGCCGCCGCCCCCCACA CACACACCAAAATAACTGAGTAAATAAAAAATAGACCGGTCAAACCACGT TGCTGCGTGTTATAATTGGCAAATCGCGCAAAATAGAGAAGGCACGTGGT TCGAAGGGGTAATACCACCGTGAGCTAAAGGAGTATTTTCCCCCGACTGC GTGCCTCTAGCAGTTCCCACGAGTATTACTAGTTGCACTACTAAAGATAT GTTCCCAGCACCGGCGCCACTTTTCACCATACGAAGTACAGTATGGTGAT ACCAGGGTATTCAAGGAGAGGAGGGGGATGGAGGGATGGGGGGGAGGATG GTTCCCTTAACACGATGATGTCGTCGGGCAAAGGGAGTGGAAGATGGGTG TCATCACTAAAACTCTTTCTCTAGCTTGTATTTTTAGAAAACGTTTTCTC GTCGACCTGCGCGTGCGCGCCGGGTTATCGTTCGCTTTTTTTTTAATTTT TTTCCTTTTTCGCATTTTTTTTTCTTCTTTTTTTTCGTTTCTCAAGGAAA CCGAACACTCTCTTGTTGTTTGGCTGACTACTATTATACTATTAGTAATA TAGATTGTGCTATCACGACGCAGGCAGCAATTTCTGTTTACCAGGTATTT AAGAACGTTTTAGTCTAGGTTAACAGAGTTCTCGCCGATATCAGCTTTGC AAAAAAAATATATACCTGGTATAGCTTGAAGATGACCGGTTGCTTTCTTC CGATTGGCATACTGTGTGTCCCGTGGGGAGCAGTATAGTACAGTACCGGT GACTGTGTTCTCTATGGACGAGGTTACTGTGTTCGTGCCGCCGGGAGATG AGATTTGTTCGAGTAAAAAGTAGATAGGTACCCGTTTTGTGCTTCGGAAG GAAGGAAATGACCATGAAAAGGTACTCAGATATCTTATTCATGTCCCCAT CGACATACCTTCGTAGTAAGGCTCACCGCCACCTGGGACCATGGCGGTTT GTTCGCGTAGTGTAGTGGTGGCGTACCCGTTCTGTGATTTTCGGGCGGAA AAGATAACTGCCCCGAAAAGGTGGTGTTACCGTCCACGCAGCTCTATGTT TTATGTTCAGGAGAAAGCTCCCCCACGGTCGATTATCATGGTGCTTCGCT CGAATACATTGAATCTGGTGCTTACTTACGGGATTCCTCCCGTTCGCGGC GGCGTCCATTTATGAAACCGCCATATGCCATCGGGTCAGTCCCGAGTTTA TCGGGTCACGCAATTGCGTACCGATGGCGTTCACTGCCGAGAGTTTGCCG GCACAGGGCCAGTAAACCTCGAGGTAGTTCCGAACGAGTGGGACCCGCCT CTCTTTCCCACACCCACTATTGGTATGAAGTCGGCATGTTGAAAGTATCG GCGATCGTGTGGCGTTTCGGGGGAAAATGCCGTGGACCCCAAAAAAGTGT TCCTCGGTCATATCCTTGCCCCTGCTGCCCCTGTGCGGTCTCGAGTCTCG AGTTCAGCCAGCGCGAAGCTCTCCACCACTGACGATAATCGTGATTCGTT CGAATAACATGTTAGTACCCGTTCTGTAAAGTGTTTCAGGAGGGAGGTCG TGGCCCCAACAAATGTGTACCTGATTTGTGTCCGTCCCCCCTTCTAGTGT TTCAGGAGGGAGGTTGTGGCCCCAACAAGGTGTACCTTATTTATTTCCGT CCTCCCTTTTAGTTCCAGGAGGGAGGTCGTGGCCCCAACAAGGTGTACCT TATTTGTGGCCGTTCCCCTGTCCTCTGTCCCCGCGCAGTTTTGCGTCCAG AACAAAGCTTCAAACGACCTACCATCATGGTATTATAGTATGTTCGCGCC CAGTAAGAATTAGTTAATTCTATGGTGTGTCGGGTGGGAGGGAATGGCTA AAAAAAGTATGACTTTTTTATGACCCCCCCCCCCACCCCCCCCCGCTGCC ACCGCGCAGTTCTATGTTCAGGGCCAGGCTCACTACGACCTGCGATCATG GTGGCACCGGCCGATGAACCAGCTCCTGCACCAGTGGACGATGCTTGAGC GGAAGACAGACGCTGTCTTGAGCACGCTTCAGGGCGCCTCAGAAGCGATC GCGGACGAGTCACACGGTGCGTGCGTGTGTGTGTGTGTGTGTGTGTGTGT GTATTTATTAAATTGCACATAACCGCACAATCCGGCCCTGTCATCTAGTC ATTCTATGCCACTCGTTTTGATCCTCCCAAGGGGGGATCAATGATACTTA TTACGAAAACCTCTGATCAGACGCGAAAAAGGGGACACACTCTCTCTACT TGTACAATTCTTACTGTGTGTGTGTGTGTGTGCATGAAATAGGGTGCATG GCAGAGTATATGATACAGGGGCTATAAATGATTAGTCTACTACGATACTT ATAATGTAGATATGGATGTTGTAGTGTATACTGCTAAATAGCACATTCGT TTTGCCGAGATTTTTCCTCGACAACTTGTTGAGCAGAAATGGCAGTCAAA GCATGGAACATGCCTCTCAGCCCCCAGGGAAGAAATGACGGGCGTCTCAC TGCCTCTCGGCGCGCACGGCCCTCTCTCTTCACCGCCCGTTAGGCTAGCG TTATCGGGGAAAACCCTTGCCTTCAAGTCACGTTTTCCGACAAAAACACA TAGGGGAAAAAAGTGTCTCCGGCGCGGCCCACGCAGCGCTCCTTTCCAAC CGCTGGTCCACGCAGAAACAGTGCTCTGTAGAACACCAATATATTTCTGC GTGGTTGAGCGAAGATGCTTCGACCACCGAAAATGGTGTGTCTGCCCTGC GTCAACCCCTGCCCCCCCCCCCCCACACCACATGCACACGCCTCTTCGAT GGAGGCCAACCTTGGCCTCTTCTCGACAACGCCCCCCTTAACGCAAAAAT ATATCGACCGCTACACAACACATAGCACCGACATGTAAAAAAAAAAGTTC TAGCCTTAGTCTACAGATGTAGGATTGTTTCCTGGGTTTGGTCGGTATCC TAAAAGCTTTTTTATGGGGGGGGGAGAGGGATGATGACGTACCTTGACGG TTTTGACGGTTTTGTTTTGTGTTATCCTTTTCCTTTTTTTTGCCAATTTT TGGGCTGTTTTTGTCCCAGCCCTCCGTCGTCACACCTGAACAACCTCGTG AACAAAATAATGAAAGGTCATTCAGCTAAGCAGACTCCAGCTACATGAGG CGTAATTTGTCATTTTGGTTTCGATTTCGCATCGATCATCCTGTCACGGT TTTTGTGTTTATTTGTCGGTGTTTTTTTTTTTTTTTTTTTAACGGAGTAC CAGACTATCATGCAATTCCAACCCTTTAAGAACAAGTCATTTATTTCACT CATTTTTTGACGCGGTACGAAAACTGAAATCTGTATTTCCTCACGGCATC CCCTCACGGCATCCCCTCAGGCGCTAAGGACAAAGCAAGCGAGGAAGATT CTCAGGCCGCCACAGAAGAGAGGCGGCGCGCCAAGAAAGCTCGCCAAAAG CGAGCCAAGCAGCGGCAAGCAGTGGAGGCTGTTGGAGGGCGAGCAGCTTT CGTAGTCATGGCGGAGGCGTTGCGGGAGAGGGCTGACAGGCGGCGGCTGT GGAAAGAGCGAGAGGCGGACAAGGTGCTTTTAGTTTTTGCGACTCTTAAG TATATATAAAAGAGAGATAGAGAAAGAGTGTGTGTGTGCGTGTGTATTTA TGAAATTGCACATAACCGCGCAATCCGGCACTGTCATCCTATTAATAGTC ATTCTATGCGTGAGTGTGCGTGTGTGTGTGTATATTTATTAAATTGCACA TAACCGCGCAATCCGGCCCTGTCATCCTAGTCGTTCTATGCCACTCGCAT TGATCCTCCCGAGGGGGGATCAATGATACTTATTACGAAAACCTCTGATC AGATGCGACAAAGGAGACACGCTCTGTGTGTGTGTGTGTGTGTATTTATG AAACTGCACATAACCGTGCAATCCGGCCCTGTCATCCTAGTCATTCTATG CAACTCGCATTTGTCCCCCCCCACGGAGAGTTGTTATTAGGGGATCAATG ATACTTGGTACTTTCAACATGCCCACTTCATACCAATAGTGGGTGTGGGA AAGAGAGGCGAATATTAACTGGTCCATAGTGACCTGCCAAGGCAGCACTC GTTCGGAAATACCTTGAGGTTTACTGGCCCTGTGCCGGCGGACTCTCGGC AGTGAACGCCATCGGTACGCAACTGCGTGACCCGATAAACTCGGGACTAA CCCGATGGCGTGTGGCGGTTTCATAAATGGACGCCGCCGCGGAACTCGGG AGGAATCCCGTAAGTAAGCACCAGATTCAGCCTGAGCATGGAGATGAGCA GGTTGACGCGGGACGGGACGGCTGAATCCGTCTCGCGAGACCAAATTCTC AGGCACGCACGGGGACAGGGGAATATTCATTTTCCCTGTTCAGCTGACCA CGAGCAGGACATTGGCAACCTTGCAAGGTTGATCCATACTCTGCTATATG TGATGACCATACATACATACATACATACATACATTACGAGTGTGTGTGTG TGTTGCATTACGAAGATTGCCTTCGTTTTGATTTGCGTTTTCTTCTCAAT GGTGTTTAACGATGTTGTTGTTTTTCAACCTGTAGAACGTAAGGAATACA TAATATAGAATGGCGAAGGCAAGGCGTGACTTTCGTGCCGCAGGTGATCT ATCTTTATCTTGATTAATATATTTAACAAAAAAAAACGATTTTCAAGTGA GAGCCCAGATCATATGTAAAATTTATACCAGGCTAGGGGGAGATTGGTCA AGTTGGACGGCTACAACTTTGATCAGAACATAGTAAATAGTAAATACAGT CTAATTTTTTTTTGTTCTTTTTTTTTTGTTCTTCTTTTTATAGCCGATGG ACCTCATCATTACCATCCTGCCTGTGGTCACAAAGGATTTTTCCATCTTT CCCCGGTTCACGCCTTACGATATTTTTTATCGTGATGCAAGTTCAGCAAT CTTACAACTCGTCAACCGATGGTTGAATTTTACTTACTCACGTTCCCACG CTTTCCGTTACGAAAGAAAGAACACAAATTCTGCTTAAGCTAAGAATCGA ACTCACGACTTCCGCACTAGCAGGTGTGCAGGTTGCCTACTAGACCACTC GGGCTACGAGCGATACGTACGCTGAAAAAGAGCTGTAAAAAATATGACAT TTTCTTCCATGACTGGCTAGTTCAGATTTTTCTTTGAACAGGTGTGATTA CAATGACAGTATAAATGGTATGTATGTATGTATTGTAGTGTACTACAGAG GAGAATGTTCTGCCGGAAAAATGGAAGGGTCGGATATTTCCATGCGCAAA TCGTCTCCTCGAGGATCACAGAAAAAAAAAAACGTTCGGTGTTTGAAGTA AGTGGTATTCTCAACGCCGTTCATTAAAACTCTTAACGATTGCAAGTTCT CTTCCTCATTAAGTGAGTTCTGTAGATATTGTCCATTCTTTCAAGTGTAT GTTTCTTGCCGCATGTTTCGGGTTTCTTCCGCACACTTGAGTTAAGTATA AAACTGGATCCTGCTCGGAGTTTCCGACCTCGTACATTTTATGGGGGGGA AAACAAAATCCAAACAGAGCAGCTCTACAATACCGTATCGGGGTCTTCGC ACACCCCCTCGATTGACTTTCCAGGCTCGATTGCTCCACAACCAAGAGGA TGTGAACACCGACCGATACGTCTAAAGAAATATTTGGAGATCTTTCGAAA ACCGCCCTTTTCGACATTGGCACCTTATACCCTCTTGGTTGTGGAGCAAT CGAAGTCTGGGAAGTCAGTCTAGGGGGTGTGCGAAGACCCCGATACTTAT AGTATTTGTATATATAAATATATATATATATATTACGGTAGCTCTATATC CTTATTGTTATTCCTTAAATTTTTTTTTACTTTTTTTAATTGACACCAGT ATTTTATTCATGTTTTATTTCATTTTACCGTACGTCTGCCTTTACGTTCA CGTTTTATTTTATTTCTATAGCTGTGCCATACCTGGTACTTTTTTTCTTC TTCTTCTTCTTCGTATCTAAATATATTATTCGGTCCTTGCCGCCCACGCT CGGTCTGCTGCTGCCCGTGGCGCGCACGCACTCTTTTCTATATCGACACC GCCATTACTGTGCAGGTGTTCAAGCGCCTTCCGGAGGACGGGCGCCCTCT GGCGTGCCCTCTGTTCTCAGAAAATGCCGCGCCGTCTCCTTTGCCCGGCA CCCCGCATGAACTGCGTGGCCTTGCCGACACCGTTCTTCGGTGGGGAAGC ACCTACGCGGGGGAGAAAGAAGCGGGTGTCAGCTATGCAGGAGGCGTTTG CGCTGGCCGATCAGCGGCGGCGGCGGCGAGGGGAGAGGCTGGGGACGCTA ACGATCGTGATCATGCCGAGGGAACGGAGTCAATGGTTGGAGACGAAGGT GACAGGAGGAAAAACGGCATCGGAGACGGCGTAGAGGGCAACAGCAGCAA AGGCAGCGGCAACGGTTGCGGCAGCGAGTCGTTGTCGGTGGCTCCCCCGT GGCAGACGGGGCGATTCGCGCTGGAGATGCAATCCCCGTGGTCAAAACGT CTCCTGAACGGGGAAAAGACGGTCGAGACGCGGTCCTACGCCCTGCCTGC GGGGCTCTTGGGCCGGCCCATCGAAGTCATGGAGTCGCAGCCCGGGCGGG ATGGAGTTTCCGCCCTCGGCGACACGGTGGAGGCGTTTTCCCATGGACTG TCCGTCCTGGGACGCGTGGTTTTCAAAAGCTCGGAGGCGTACACGAGCCA GAAAGCCTGGGCGAGGGACGAGCCCCGTCACCTCGTACCGCCTAGCTCCG CAGCTTACGGGTGGAGCCCCCCCCCTCGGAGGGTGTACGGCTGGACGGTG GGTGAGGTCACTGCGTACCCGAAGCCGAGGGCTGTCCGGCGCATGCAGCG TGCTTTCCGGTCGCTGTTTGAGGTGGAG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig846:341946..350823-

>mRNA_F-serratus_M_contig846.19840.1 ID=mRNA_F-serratus_M_contig846.19840.1|Name=mRNA_F-serratus_M_contig846.19840.1|organism=Fucus serratus male|type=CDS|length=2484bp|location=Sequence derived from alignment at F-serratus_M_contig846:341946..350823- (Fucus serratus male)
CGGACCTTGAAGCAATGGAGGGCCGAGCAGCTCACGCTCAGCGAGCTCGA
ATTTGAATGGATCCGTCAGCGGACCTTGAAGCAATGGAGGGCCGAGCAGC
TCACGCTCAGCGAGCTCGAATTTGAATGGATCCGTCAGTTCTATGTTCAG
GGCCAGGCTCACTACGACCTGCGATCATGGTGGCACCGGCCGATGAACCA
GCTCCTGCACCAGTGGACGATGCTTGAGCGGAAGACAGACGCTGTCTTGA
GCACGCTTCAGGGCGCCTCAGAAGCGATCGCGGACGAGTCACACGTTCTA
TGTTCAGGGCCAGGCTCACTACGACCTGCGATCATGGTGGCACCGGCCGA
TGAACCAGCTCCTGCACCAGTGGACGATGCTTGAGCGGAAGACAGACGCT
GTCTTGAGCACGCTTCAGGGCGCCTCAGAAGCGATCGCGGACGAGTCACA
CGGCGCTAAGGACAAAGCAAGCGAGGAAGATTCTCAGGCCGCCACAGAAG
AGAGGCGGCGCGCCAAGAAAGCTCGCCAAAAGCGAGCCAAGCAGCGGCAA
GCAGTGGAGGCTGTTGGAGGGCGAGCAGCTTTCGTAGTCATGGCGGAGGC
GTTGCGGGAGAGGGCTGACAGGCGGCGGCTGTGGAAAGAGCGAGAGGCGG
ACAAGGCGCTAAGGACAAAGCAAGCGAGGAAGATTCTCAGGCCGCCACAG
AAGAGAGGCGGCGCGCCAAGAAAGCTCGCCAAAAGCGAGCCAAGCAGCGG
CAAGCAGTGGAGGCTGTTGGAGGGCGAGCAGCTTTCGTAGTCATGGCGGA
GGCGTTGCGGGAGAGGGCTGACAGGCGGCGGCTGTGGAAAGAGCGAGAGG
CGGACAAGGTGTTCAAGCGCCTTCCGGAGGACGGGCGCCCTCTGGCGTGC
CCTCTGTTCTCAGAAAATGCCGCGCCGTCTCCTTTGCCCGGCACCCCGCA
TGAACTGCGTGGCCTTGCCGACACCGTTCTTCGGTGGGGAAGCACCTACG
CGGGGGAGAAAGAAGCGGGTGTCAGCTATGCAGGAGGCGTTTGCGCTGGC
CGATCAGCGGCGGCGGCGGCGAGGGGAGAGGCTGGGGACGCTAACGATCG
TGATCATGCCGAGGGAACGGAGTCAATGGTTGGAGACGAAGGTGACAGGA
GGAAAAACGGCATCGGAGACGGCGTAGAGGGCAACAGCAGCAAAGGCAGC
GGCAACGGTTGCGGCAGCGAGTCGTTGTCGGTGGCTCCCCCGTGGCAGAC
GGGGCGATTCGCGCTGGAGATGCAATCCCCGTGGTCAAAACGTCTCCTGA
ACGGGGAAAAGACGGTCGAGACGCGGTCCTACGCCCTGCCTGCGGGGCTC
TTGGGCCGGCCCATCGAAGTCATGGAGTCGCAGCCCGGGCGGGATGGAGT
TTCCGCCCTCGGCGACACGGTGGAGGCGTTTTCCCATGGACTGTCCGTCC
TGGGACGCGTGGTTTTCAAAAGCTCGGAGGCGTACACGAGCCAGAAAGCC
TGGGCGAGGGACGAGCCCCGTCACCTCGTACCGCCTAGCTCCGCAGCTTA
CGGGTGGAGCCCCCCCCCTCGGAGGGTGTACGGCTGGACGGTGGGTGAGG
TCACTGCGTACCCGAAGCCGAGGGCTGTCCGGCGCATGCAGCGTGCTTTC
CGGTCGCTGTTTGAGGTGGAGGTGTTCAAGCGCCTTCCGGAGGACGGGCG
CCCTCTGGCGTGCCCTCTGTTCTCAGAAAATGCCGCGCCGTCTCCTTTGC
CCGGCACCCCGCATGAACTGCGTGGCCTTGCCGACACCGTTCTTCGGTGG
GGAAGCACCTACGCGGGGGAGAAAGAAGCGGGTGTCAGCTATGCAGGAGG
CGTTTGCGCTGGCCGATCAGCGGCGGCGGCGGCGAGGGGAGAGGCTGGGG
ACGCTAACGATCGTGATCATGCCGAGGGAACGGAGTCAATGGTTGGAGAC
GAAGGTGACAGGAGGAAAAACGGCATCGGAGACGGCGTAGAGGGCAACAG
CAGCAAAGGCAGCGGCAACGGTTGCGGCAGCGAGTCGTTGTCGGTGGCTC
CCCCGTGGCAGACGGGGCGATTCGCGCTGGAGATGCAATCCCCGTGGTCA
AAACGTCTCCTGAACGGGGAAAAGACGGTCGAGACGCGGTCCTACGCCCT
GCCTGCGGGGCTCTTGGGCCGGCCCATCGAAGTCATGGAGTCGCAGCCCG
GGCGGGATGGAGTTTCCGCCCTCGGCGACACGGTGGAGGCGTTTTCCCAT
GGACTGTCCGTCCTGGGACGCGTGGTTTTCAAAAGCTCGGAGGCGTACAC
GAGCCAGAAAGCCTGGGCGAGGGACGAGCCCCGTCACCTCGTACCGCCTA
GCTCCGCAGCTTACGGGTGGAGCCCCCCCCCTCGGAGGGTGTACGGCTGG
ACGGTGGGTGAGGTCACTGCGTACCCGAAGCCGAGGGCTGTCCGGCGCAT
GCAGCGTGCTTTCCGGTCGCTGTTTGAGGTGGAG
back to top