mRNA_F-serratus_M_contig845.19827.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: A0A6H5JQN2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQN2_9PHAE) HSP 1 Score: 1007 bits (2603), Expect = 0.000e+0 Identity = 812/1888 (43.01%), Postives = 965/1888 (51.11%), Query Frame = 1
Query: 1 MDAPSMNNLVEDLESKDTKRRLQGLDILEQSLRQTSPA----------------EDSWKQVVAPLVRTLRDNNFKVCRVGLTCLESLV-------------------------GHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFR-HKNWRVREKLVVFLGRAVEVDGAGVMG-----------------RPPAALAGILADALNDSASQVRQAALVAAGTLVELTGES----LLVSLLC--FRSIVLLTKFDTWGLHASGAT-------VGSKTQEPNQPLSWNPRPRDRQTQLEQR-----------------------GVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTP----AAVRSGXXXXXXSSSPAAVGSP--IWLSDGGEDSAFSALEPLVPVKVCTERDVRREVEAVKACLEHSSDWQGWVGAMRRLAGVALGGAAEEFPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVAFDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQAPTH--VLREDREFDVDAFVKAANAAAEDPQ--PALGECTKERGVAAAGSCPASVNPSPNSHPSSSTAATRRMKDGQFSSAPNFAVAAASIGSGVERISQPPRFSAST--TVGIVRTSNPESGGSGSGSGNSGHLLRSARSKVDRVGVGNGSSSCSNGVGXXXXXXXXEGGMRVMRPGGGAPTRKARGKATPQQVKDDDSGAMDSGRVTPSATGALRVPCGNAAAAVAFNXXXXXXXXXXXXXXXXXXXXXXXXAQRVVRKPMLTASTTGVATAVDSRGA--AREGFSGGG-GIAAGRVAGRQRGESPRASTADGEQQQRHRRDADEGRGGELADIGSVRPLREVAGPVVLDRKELLRKMDSLVEQAGLPHWAARVEALEGLLKLLTVEAN----------------GDGGRIVLESRAAARRLESMIAKRLRDVHFKVSSTALKLFGGLVEEHPDPTAGHADALLPLVFPSLADTKEPVRLAASRALDACRAAYPSNDLCAALCPRVLEFAPGRARTGLLEFLIVLVPHSAKY-LSGQG----------HIQALTQRVAAALVQSPPPMSWDGGLGDSQGGPTSAGVEASAAIRLLTALFHVDREAFVKAVTGAGVGRGGSLPPESAAAVRRALAHSCPGVAELVSSSPVQQPQEQKLAHTAIVTSHTHSQWASVAAPVTVKIETDGAKNECDSRGGKAVPVGVSLPL-PSVPASKRITTEDSENTMIN------------------------------------VARIGTEGDLNGCSRNGSNRGEAMA--------------GEERRPLASVTLRHSGNTMQGAVVNTLL-----KDKELFGSRPASAKPGMENRYTATSSATSNSNV-SPQSPPLTGEREALDVARRLISGLSPGARSNQKVEALSSLRALADGEGVGGHEGFWPRYFGQVLTLLLDGAAAASTRAGRRGSSG----------------------ERPTGTPKSPSRRHALFRAKYLQGVRCLAARRGTLFVGYTETVTERLVEIGAG----DPCVVVRCEVEACMVDLVPVLDPPRFLAALTPLLFVGAEPDYCGRGGGAGQSGIEFIDSAATTGRDVLAQCVVLGALRALTPCLSSPCLLGALGAGPLMEGLGAALEGRDMEARRGSVM----VFQVLEEALLPFLSGFPTCRLKLITMYIEQRRARDNRAAAGA 4992
MDA S++ +L+SK+TKRRLQ L+ L ++L+ P ++SW+Q+VAPLV TLRDNNFKVCR L CL+SLV G +S I+PFLS I PAVVEC G SK+AVQEKG+D LLA+S P V G RDT+++L HF H+NWRVRE+LV +LGR E+D AG+ + LAG+LADALNDSASQVRQ AL AA +V + G + LL L R +VL D A+G GS E + P QL R G+ N RL + R + P+AAG+G G T ++ APTP AA R G S + SP L GGE+SAFSALEPLV V V TERDVRREVEAVKA LEH SDWQ WV AMRRLAGVALGG EF ALL GLVRASV EMVGHKVSENRSAVAREACRCVAVLARCL DHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCT GF RLLP L+DTA+NKSAAIRRRCLDY +LALA WGD AFDR QLR+M+A AV DAD S RATARRA+WVL RFP+L+QS+M SL+PSMQA V R A ++ A + Q PA E G+A R V R P R A+ T+ + N S G+GS D VG XXXXXXXX G A T P K +GA RVP G + + A RVV + G S GA A G S GG G+ R+ GRQ+ + ++A G +++ GE G VA P+VLDR+ +LR+MD L +QAG HW AR EALE +L LLT E G+GG+ VLESR A+RRLE++IA+R RDV+F+V + ALKLFGGLVE HP A H ALLP VFP+LAD KEPVR AA+ AL+ACRAAY N LC++LCPRVLE GRARTGLLEFL V+VPHSA + L G H+Q+LTQRVA+AL Q+PPP +WDG LG+ GPTSAG ASAAIRLLTAL +D +A A +LPPE AAAVRRAL+ P SP P + A TS S A+V A +E DG ++ G GV+ + P+V + + + + + A G C RG A R+PLA +T R S + G L+ K K+L G + K + A +SAT +S V + S EA+ V RLI+GLS GARS++K+EALSSLR LADGEG GG FWPRYFGQVL LLL+GAA +S G AL RAK+LQGVRCL ARRG +F G TE V RLVEIG G DP V VRCE EAC+ DLV VLDP R+LA LTPL+ + A + VLAQCV LGALRALTP LSSP LLGALGAGPL+ GL AAL G D+EAR+ +V+ ++QVLEEALLPFL+ FPT RLKLITMYIEQRRARD RA+A A
Sbjct: 1 MDASSLSAWASELDSKNTKRRLQALEDLGEALQSQPPRSSSETASGGGLACNYDDNSWQQIVAPLVHTLRDNNFKVCRASLACLKSLVARVTEHDATRKTAGRTAAAAASGRKGSTNSSITPFLSLITPAVVECLGNSKAAVQEKGVDLLLAVSDPAVAGGRDTVSSLQRHFAGHRNWRVRERLVAYLGRVAELDPAGINSIHXXXXXXXXXXXXAAETESSLLAGLLADALNDSASQVRQEALGAATRVVRMLGGNGGPGLLAQLEAKGVRQVVLSALRDAGSGSATGXXXXXXXXETGSAFTEGAAATAGLLSPITPAPQLASRSGAXXXXXXXXXXXXXXXXXXXXGIANG--GGARLTTATRS------RRPTAAGKG-------GRGATTSVLTRAGVGVPGERGAPTPTGGEAAGRGGGGSRAGSPTTLIGNSPRGCALGSGGEESAFSALEPLVAVTVYTERDVRREVEAVKAGLEHESDWQRWVSAMRRLAGVALGGGGSEFSALLAGLVRASVHEMVGHKVSENRSAVAREACRCVAVLARCLTDHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTKDGFPRLLPYLVDTAKNKSAAIRRRCLDYAVLALACWGDAAFDRCAVQLRDMVAAAVADADSSVRATARRAYWVLNLRFPDLAQSVMGSLAPSMQASRTPAVARRVHGTHHGAPSSTSSGAHQFAQRRPASAAFDGEGGLAXXXXXXXXXXXXXX------XVKVDRXXXXXXXXXXXGRVLRRXXXXPARRTRPPGRAPAAHDGTMDVADNRNASSFGAGSA--------------FDSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSEGELAATMM------PATAK----------------SGAFRVPRGGVSETMT----------RVPAAASGDALHQRSPAARVVARRSSVVPAAGGEGEYQSYGAPGALGGVSKGGRGVQPARIVGRQQQQQRLDASAVGRREEEP---------GESKADGGGAMRAVVAAPIVLDRRHVLRQMDDLADQAGASHWGARTEALESMLHLLTAEGGXXXXXXDGSNIGSGKRGEGGKFVLESRPASRRLETVIAERTRDVNFRVVAAALKLFGGLVEAHPALMADHTSALLPSVFPTLADPKEPVRQAANEALNACRAAYNPNQLCSSLCPRVLELPAGRARTGLLEFLAVVVPHSAVFFLDGHXXXXXXXXXXXHMQSLTQRVASALAQTPPPSNWDGSLGED--GPTSAGPAASAAIRLLTALSRLDGDALATASA--------ALPPEPAAAVRRALSFLRP-------KSP--SPPRRTGAAALSPTSAGESAVAAVGA-----VEADGTRSPTTVSDGDGEEHGVAAVVTPAVGGVRGVGGKPGDGNEGSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPGEGGFALSSNPGSAFLCEERSGERGRLEAESPLFTPPEQRQQRNPHRQPLAPLTPRDSNRQLTGEQHAGLVSGGSGKIKQLAGF--PTPKKSLVLSAVAPASATRSSTVPAATSQDQKAAAEAVMVGGRLIAGLSRGARSHRKIEALSSLRGLADGEGAGGRPDFWPRYFGQVLMLLLEGAAVSSPVXXXXXXXGVGRGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALLRAKHLQGVRCLVARRGEMFPGSTEMVVGRLVEIGGGGGEGDPSVAVRCEAEACLADLVSVLDPARYLAVLTPLIALLPAAXXXXXXXXXXXXXXXXXXXLAGGAQGVLAQCVALGALRALTPRLSSPGLLGALGAGPLLAGLEAALGGGDLEARKRAVLALVEMYQVLEEALLPFLANFPTNRLKLITMYIEQRRARDKRASAAA 1786
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: A0A835ZF61_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF61_9STRA) HSP 1 Score: 238 bits (606), Expect = 1.050e-59 Identity = 190/580 (32.76%), Postives = 269/580 (46.38%), Query Frame = 1
Query: 37 LESKDTKRRLQGLDILEQSLRQTSPAEDSWKQVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVELTGESLLVSLLCFRSIVLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALEPLVPVKVCTERDVRREVEAVKACLEHSSDWQGWVGAMRRLAGVALGGAAEEFPAL--LVGLVRAS-VQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVA-FDRYLPQLRNMIATAVGDADGS-TRATARRAFWVLKKRFPELSQSIMDSLSPSMQ 1758
LE+KDT RLQGL+ L + LR+ D+W +++ PL LRDNN KVC++ L C+ L+G + I PF ++++P V EC G K+ V+++ + LLA SSP V G + A+ F+ KNWR+RE ++ F+GR VD G R A +AG+LA A +DS+S+VR A L + G+ LL QL + GVRN Q AS XXXXXX F+ L P+ PV+V TE DV+RE++AV L+ + DW+ WV A++RLAGVA GGAA+ L V VRAS V V V + RSAV +EACR A + L LAE WLP LLRN + A ++A+ AA +I T GF +LLP L+ A K+A +R R + Y+ LA++ W + ++R L + + + AV D D TRA A R + L +R+P L+ +M ++ +Q
Sbjct: 11 LEAKDTMTRLQGLEGLCEELRK-GQLPDAWAELIVPLGACLRDNNHKVCKIALECVGFLIGRLQGAIQPFAASMLPGVTECLGNGKAPVRQEAVAVLLAFSSPRVCGTVSMLDAIVSRFQQKNWRLREAVLEFVGRVATVDPGGWAARRQATIAGVLAPAFSDSSSEVRTQAAQTGRLLHSVLGDDLL------------------------------------------------QQLSEHGVRNMQWASAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---------XXXXXAQSYQPFAKLPPIQPVRVYTEGDVQREIDAVARGLQRADDWEAWVAALQRLAGVARGGAADSAALLAAFVAAVRASGVDAAVAKHVCDLRSAVQKEACRAAAAVVTALGAATAPLAEAWLPALLRNASNAKETISASAHCAAESILTATPEGFPKLLPQLLVGAAAKAAPVRHRSMGYLFLAVSTWAEGGVWERSLGPIADAVTVAVADKDVQFTRAAACRVYCALSRRYPALAARVMGAVDLRVQ 532
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: UPI001C72609D (CLIP-associating protein 1 isoform X7 n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI001C72609D) HSP 1 Score: 134 bits (337), Expect = 1.080e-27 Identity = 155/606 (25.58%), Postives = 269/606 (44.39%), Query Frame = 1
Query: 7 APSMNNLVEDLESKDTKRRLQ-GLDILEQSLRQTSPAEDSWKQV---VAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAG--VMGRPPAALAGILADALNDSASQVRQAALVAAGTLVELTGESLLVSLLCFRSI------VLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAF-SALEPLVPVKVCTERDVRREVEAVKACL-EHSSDWQGWVGAMRRLAGVALGGAA---EEFPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTR-AVVVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVAFDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQAPTH 1770
A S+ +V L ++D K+R+Q G DIL L+ S +D ++++ + + L ++NFKV + G+ + L + D P++STI PA V+ G K V+ + +L + +PV + + L F HKN+RVRE+++V L + +++ G+ V+ R L L L D SQVR A+ + + GE L L I +L TKFD + A+GA + S + ++ E +Q +++ +V+R + PV+ RG + A T RKP + ++ P + SG + G ++ F + E + + + + +++ E+ +K L + S+DW+ V RR V + G E +P L + ++ V + RS V REAC +A L++ + +E LP L+ A +++ AG A R I T RL+P + ++KS IR+ C +++ L W +R++ L + I + DAD RA +R+AFW F + + +++SL S Q H
Sbjct: 2 AGSLQQIVPLLTTQDIKKRIQLGSDILS-CLKNPSCLQD-FEEIGFFIDSVSSWLSNSNFKVAQNGIEIMTILAEEMKEDFKPYISTIFPATVDRLGDGKDQVRLQAKGLMLKLMNPV-SSPQYVYDKLSIAFNHKNFRVREEVMVLLQQTLDIFGSSAIVISR----LMPSLVKLLGDPNSQVRDTAMQTLVHVYKHVGERLRHDLSKRAGIPPPKLQLLSTKFDE--VRAAGALLPSALERAG-------------SRTEDETDSKSQSSTINKNAVKRASSAPPVR------RGVFTSAKSLPNSTTPKRKP------SMKSTSKPMSSGSG-------------------AGGADEEMFIKSFEDVPRISIYSAKELESELSKIKDVLGDSSNDWEKRVEMSRRFRSVIVAGGQTYDEFYPYLRL------LEHPFQTSVKDLRSQVVREACISIAFLSQQIGSKLDHFSEALLPSLINLIPNSAKIMSTAGIVAIRFIIRYTHVS--RLIPIITSHLQSKSKDIRKTCFEFLDQLLVTWPTHPMERHVQTLADAIRRGISDADPEARAFSRKAFWSFADHFRDQADCLLNSLDHSKQRMLH 546
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: A0A2K1IGD4_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1IGD4_PHYPA) HSP 1 Score: 134 bits (337), Expect = 1.120e-27 Identity = 155/600 (25.83%), Postives = 254/600 (42.33%), Query Frame = 1
Query: 16 MNNLVEDLESKDTKRRLQGLD----ILEQSLRQTSPAEDSWKQVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLA---ISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVELTGESLLVSLLCFRSIVLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSN--PVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALE----PLVPVKVCTERDVRREVEAVKACLEHSSDWQGWVGAMRRLAGVALGGAAE--EFPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFG-CTTAGFARLLPCLIDTARN-KSAAIRRRCLDYIMLALARWGDVA-FDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQ 1758
M + L+SKDTK R+ G++ +LEQS + + AE +V + L+DNNFKV + L S + + ++PA VE G K V++ G FLLA ISSP R A + H+NWRVRE+ A+ + A + L +L + L DS S VR+AA+ LC + G G + Q R + R +QL++ R ++ +R + S TP+ P P KP A T + P P + G +S G + ALE P P+++ ERD+ +E E + L + DW + AM+R+ G+ GGA + FP LL L+ ++ ++ RS++ ++AC+ + VL + L F AE +LP L + V V+A + D +++ C A R+LP +++ A++ ++A +R RC +Y++L L RW D R ++I DA R+ +R+ + V + +P+ ++ + + P Q
Sbjct: 1 MEEAIVQLQSKDTKERMAGVERLQIVLEQSRKSLTAAEVC--SLVDASIPLLKDNNFKVAQGALQAFSSAAALAGDHLKLHFNALLPATVERLGDGKQPVRDAGRRFLLALMEISSPTTIVERAGAYA----WSHRNWRVREEFARTAASALNLFTAVELPFQRLILPSVL-NLLEDSNSSVREAAM------------------LCLEEMY----------RQGGQQFGDELQ----------RHQLRASQLKEINARFEKIEPVRNMFDSKSYSSTVPSTTTPNRFSTAPSQP------------KPAPQQAVTNHSWPA-----------SELKVPVSGG----ISRGNSPKSKPALEADEKPAEPIRIYNERDLAKEFEKATSMLAPAQDWSIRMSAMQRIEGIVAGGATKYSSFPQLLKQLISPLCDQL-----ADRRSSIVKQACQLLKVLTKELKSDFEVFAESFLPMLFKLVVITVLVIAESADACIKSMLQHCKVA---RVLPKMVELAKHDRNAVLRARCCEYLLLVLERWFDSPEMQRSAELYEDLIKCCCSDAMSEVRSLSRQCYRVFARCWPDRARRLYQAFDPVTQ 520
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: UPI000BA82335 (CLIP-associating protein 1-like isoform X1 n=8 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA82335) HSP 1 Score: 134 bits (336), Expect = 1.230e-27 Identity = 158/601 (26.29%), Postives = 263/601 (43.76%), Query Frame = 1
Query: 13 SMNNLVEDLESKDTKRRLQ-GLDILEQSLRQTSPAE-DSWKQVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVEL---TGESLLVSLLCFRSIV------LLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLR-PAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALEPLVPVKVCTERDVRREVEAVKACL-EHSSDWQGWVGAMRRLAGVALGGAAEE---FPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLA---DHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVAFDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQ 1758
+++ V L+ +DTK+R+Q G DI++ + E + + V + L +NFKV + GLT L L + D P++ST++ A V+ G SK V+E+ +FLL + S V + + L P F HKNW+VRE++++ L + G+ + L + L+D SQVR+ A T+VE+ GE + L+ +I + KFD + SGA + S + +P + RG + S +S + S+ A L P P++ T + P+ SS A + + E+ A + + V++ + R++ E+ +K L + ++DW V AM+RL + + GA E FP+L ++ + + RS V REAC +A L++ L DHF L L+ N + +++ AG A R I T RL+P + +KS IR+ C +++ L W +R++ L+ I + DAD RA +R+AFW F E + S++ SL S Q
Sbjct: 3 NLDEYVPHLDIQDTKKRIQLGDDIIKYLENPVNSIECEEFAGFVDSVASWLNSSNFKVSQNGLTILTLLADRMKDDFRPYISTVLSATVDRMGDSKDQVREQAKEFLLKLMSDV-SSPQHMFEKLMPVFNHKNWKVREEILICLQDTLVRHGSHSLTLSK--LMPSVVKLLSDPNSQVRE---TANNTVVEIYKHVGEKVRHDLMKKYNIPAAKLQGIFAKFDE--IKTSGAFLPSASFDP----------------VGHRGDDDIDSGSQHSESSDVE---------SSXXXXXXXXXXXXXXXXAMLSTPKHTPSSSTLQRKPS----------AKNSSGKATLSVSVAAGAADEEMFMRAFDDVPRVQLYSGRELENELGKIKETLSDPNNDWGKRVEAMKRLRSLIIAGAIEYEELFPSLR------QLEVAFQSSLKDLRSQVVREACITIAYLSQQLGIKFDHFSEAVLQCLISLIPNCAK--IMSTAGIVAIRFIIQHTHGS--RLIPIITSNLTSKSKEIRKVCCEFLDQLLHTWPTHTLERHIAILQEAIRKGLSDADPEARAYSRKAFWGFADHFKEQADSLLSSLDSSKQ 550
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: A0A2K1K7V5_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1K7V5_PHYPA) HSP 1 Score: 132 bits (333), Expect = 3.300e-27 Identity = 157/599 (26.21%), Postives = 255/599 (42.57%), Query Frame = 1
Query: 16 MNNLVEDLESKDTKRRLQGLD----ILEQSLRQTSPAEDSWKQVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLA---ISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVELTGESLLVSLLCFRSIVLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENA-PTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALE----PLVPVKVCTERDVRREVEAVKACLEHSSDWQGWVGAMRRLAGVALGGAAEE--FPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTRAV-VVAAAGDEAARAIFG-CTTAGFARLLPCLIDTARN-KSAAIRRRCLDYIMLALARWGDVA-FDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQ 1758
M + L+SKDTK R+ G+D +LEQ + + AE S +V + L+DNNFKV + L L S + + ++PA VE G K V++ G FLL+ ISSP R A + HKNWRVRE+ A+ + A + L +L + L DS S VR+AA+ LC + G G + R + R +Q ++ R ++ +R + S+ + P R +A +++ T AV S P + G +S G + L+ P P++V +ERD+ +E E + L + DW + AMRR+ G+ +GGA + F LL LV ++ ++ RS++ ++AC+ + VL + L F AE +LP L + V V+A + D +++ C A RLLP ++D A++ +SA +R RC +Y++L L RW D R ++I DA R+ AR+ + V + +P+ ++ + + P Q
Sbjct: 1 MEEAILQLQSKDTKERMAGVDRLQTLLEQCRKSLTVAEVS--SLVDASISLLKDNNFKVAQGALQALASAAALAGDHLKLHFNALLPATVERLGDGKQPVRDAGRRFLLSLMEISSPTTIVERAGAYA----WGHKNWRVREEFARTAASALNLFTAAELPFQRLILPSVL-NLLEDSNSSVREAAM------------------LCLEEMY----------RQGGKQFGDELV----------RHQLRASQFKEINARFEKIEPVRNMFDSKPHSSS----------------------AQCITPPNRFSATPSQHKYATQQAVTSHSWSAPEVKVPVSSG----ISRGNSPKSKPILDADEKPADPIRVFSERDLAKEFEKAASMLAPTQDWSIRMSAMRRIEGIVVGGATKYSGFLQLLKQLVNPLCDQL-----ADRRSSIVKQACQLLKVLTKELKSDFDVFAETFLPVLFKLVVITVLVIAESADACIKSMLQHCKVA---RLLPKMVDFAKHDRSAVLRARCCEYLLLVLERWFDAPEMQRSAELYEDLIKCCCADAMSEVRSLARQCYRVFARCWPDRARRLYQAFDPVTQ 520
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: A0A067R2S2_ZOONE (CLIP-associating protein 1 n=2 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067R2S2_ZOONE) HSP 1 Score: 128 bits (321), Expect = 8.610e-26 Identity = 144/557 (25.85%), Postives = 254/557 (45.60%), Query Frame = 1
Query: 130 QVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVEL---TGESLLVSLLCFRSI------VLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQ----TPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALEPLVPVKVCTERDVRREVEAVKACL-EHSSDWQGWVGAMRRLAGVALGGAA--EEFPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLA---DHFGALAELWLPELLRNTTRAVVVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVAFDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSL 1743
Q + L+ ++ +N KV + G+ + LV + D P++ST++P +++ G SK V+EK +L + V L P F HKN ++RE+++ L + GA + + L + L D S VR A TLVE+ G+ L + L ++ L+ +FD L A+G + P+ ++ R D E G+ + A+ R SV R G + ++ TP+ G G +++T++LR+P P+AG A E++ A E + +++ + RD+ +++ ++ + + + DW V A++++ + + GA+ +EF A L L+ S Q V + RS V REAC +A L+ L DHF L L++N+ + ++A+AG R I T + RL+P + +KS IRR C +++ L W + +R++ L++ I + DAD R AR+A+W + FPE + S+++SL
Sbjct: 48 QFIDGLIPWMQSSNNKVSQNGIDAMTYLVDRMAVDFRPYISTVLPPIIDRLGDSKEVVREKAQLLILKLMERDVITPSSLFEKLTPAFSHKNGKIREEVMNCLQTTLTEHGARSLS--VSRLIPSIVKLLGDPMSTVRDTAF---NTLVEVYRHVGDRLRIDLQKKHNLPASKLPALMARFDE--LRAAGDLL------PSASVADGGRGDD-----EVEGI--VKSATKRANSVPRRGIFSAIKSVPSTPAPPGTGSK------IQRTSSLRRPT-PSAGGQAGAVD------------------------------EETFSRAFEDVPTIQLFSARDLEKQLTVIRETIADPNKDWSKRVDALKKVRSLVIAGASSFDEFYAHLK-LLEPSFQT----SVKDLRSQVVREACYTIAFLSEQLGPRCDHFAEDLLNSLISLIQNSAK--IMASAGVVTVRFIIRYTHSP--RLIPIIAQNLNSKSKDIRRACCEFLEQLLHSWSTHSLERHIALLQDAIKKGIADADPEARLCARQAYWSFRSHFPEQADSLLNSL 538
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: A0A6P4ZJX3_BRABE (CLIP-associating protein 1-B-like isoform X3 n=5 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4ZJX3_BRABE) HSP 1 Score: 126 bits (317), Expect = 2.540e-25 Identity = 145/594 (24.41%), Postives = 255/594 (42.93%), Query Frame = 1
Query: 28 VEDLESKDTKRRLQGLDILEQSLRQTS---PAEDS-WKQVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVELTGESLLVSLL-----CFRSIVLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALEPLVP-VKVCTERDVRREVEAVKACL-EHSSDWQGWVGAMRRLAGVALGGAAE-----EFPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTR-AVVVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVAFDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQ 1758
V+D+ KDT +RL ++L L+ S PA+ + ++V L L +NFK+C G+ + L+ + ++T++P +++ G SK V+E+ + +L + PV + + + F H+N+RVRE++++ L + GAG + + + L D S VR A+ + + GE + V L R V+ KFD +++Q G A +S L+S S++G G + + R + A R +AP +G SS A G G ++ F VP + + + RD+ ++ +K L + DW+ V ++++L + + GA + + LL + + +V+++ RS V REAC ++ LA+ L F AE+ +P L A ++A AG R I T A RL+P + +KS AIRR+ + + L L W +++ L I +GDAD R AR+ FW K+ +P LS++++ L+P+ +
Sbjct: 10 VDDVLGKDTTKRLAVAEVLVTYLQDHSSPLPADSALMDRLVDGLAAWLNTSNFKICLNGMEVISHLIIRLKEKFRHHINTVLPPLIDRLGDSKDQVREQAQELILRLMEPV-SSPQYVFERMMGAFGHRNFRVREEVLICLVATINTFGAGSLTLSK--IVPHICKLLGDPNSAVRDMAINSLVEIYRHVGEKVRVDLSKKGIPSSRLSVIFQKFD---------------------------------EVKQSGRMLAVSSSSSLRS-------------SSSGDGDETDSAKVARMSGAKR---------VSSAPPRRPASAGMKPPLAPSSSAGAG-------GADEEMFIKYFEEVPKINLFSPRDLEDHMQKIKDTLGDDKCDWEQRVDSIKKLRSLLVHGAMDYDNFLQQLKLLEPVFKLAVRDL--------RSQVVREACITLSYLAQRLQSKFDHFAEVVMPNLFNLIPNSAKIMATAGAVTCRFIIQYTHAH--RLIPIITSHHNSKSVAIRRKTFELLDLLLRSWETNTLEKHSQTLVETIKNGIGDADSEARVDARKCFWAFKEHYPNLSENLLKLLTPAQK 528
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: A0A6P4Z7N6_BRABE (CLIP-associating protein 1-B-like isoform X1 n=33 Tax=Branchiostoma TaxID=7737 RepID=A0A6P4Z7N6_BRABE) HSP 1 Score: 126 bits (317), Expect = 2.540e-25 Identity = 145/594 (24.41%), Postives = 255/594 (42.93%), Query Frame = 1
Query: 28 VEDLESKDTKRRLQGLDILEQSLRQTS---PAEDS-WKQVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVELTGESLLVSLL-----CFRSIVLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALEPLVP-VKVCTERDVRREVEAVKACL-EHSSDWQGWVGAMRRLAGVALGGAAE-----EFPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTR-AVVVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVAFDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQ 1758
V+D+ KDT +RL ++L L+ S PA+ + ++V L L +NFK+C G+ + L+ + ++T++P +++ G SK V+E+ + +L + PV + + + F H+N+RVRE++++ L + GAG + + + L D S VR A+ + + GE + V L R V+ KFD +++Q G A +S L+S S++G G + + R + A R +AP +G SS A G G ++ F VP + + + RD+ ++ +K L + DW+ V ++++L + + GA + + LL + + +V+++ RS V REAC ++ LA+ L F AE+ +P L A ++A AG R I T A RL+P + +KS AIRR+ + + L L W +++ L I +GDAD R AR+ FW K+ +P LS++++ L+P+ +
Sbjct: 10 VDDVLGKDTTKRLAVAEVLVTYLQDHSSPLPADSALMDRLVDGLAAWLNTSNFKICLNGMEVISHLIIRLKEKFRHHINTVLPPLIDRLGDSKDQVREQAQELILRLMEPV-SSPQYVFERMMGAFGHRNFRVREEVLICLVATINTFGAGSLTLSK--IVPHICKLLGDPNSAVRDMAINSLVEIYRHVGEKVRVDLSKKGIPSSRLSVIFQKFD---------------------------------EVKQSGRMLAVSSSSSLRS-------------SSSGDGDETDSAKVARMSGAKR---------VSSAPPRRPASAGMKPPLAPSSSAGAG-------GADEEMFIKYFEEVPKINLFSPRDLEDHMQKIKDTLGDDKCDWEQRVDSIKKLRSLLVHGAMDYDNFLQQLKLLEPVFKLAVRDL--------RSQVVREACITLSYLAQRLQSKFDHFAEVVMPNLFNLIPNSAKIMATAGAVTCRFIIQYTHAH--RLIPIITSHHNSKSVAIRRKTFELLDLLLRSWETNTLEKHSQTLVETIKNGIGDADSEARVDARKCFWAFKEHYPNLSENLLKLLTPAQK 528
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Match: UPI000C6E5A84 (CLIP-associating protein 1-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E5A84) HSP 1 Score: 125 bits (314), Expect = 5.490e-25 Identity = 158/597 (26.47%), Postives = 261/597 (43.72%), Query Frame = 1
Query: 7 APSMNNLVEDLESKDTKRRLQ-GLDILEQSLRQTSPAE-DSWKQVVAPLVRTLRDNNFKVCRVGLTCLESLVGHVDSDISPFLSTIIPAVVECFGISKSAVQEKGIDFLLAISSPVVNGARDTITALDPHFRHKNWRVREKLVVFLGRAVEVDGAGVMGRPPAALAGILADALNDSASQVRQAALVAAGTLVEL---TGESLLVSLLCFRSI------VLLTKFDTWGLHASGATVGSKTQEPNQPLSWNPRPRDRQTQLEQRGVRNAQLASLRLKSVQRDGGSNPVQTPSAAGRGPVSPAVVGLRQTAALRKPLRPAAGTTENAPTPAAVRSGXXXXXXSSSPAAVGSPIWLSDGGEDSAFSALEPLVPVKVCTERDVRREVEAVKACL-EHSSDWQGWVGAMRRLAGVALGGAAEEFPALLVGLVRASVQEMVGHKVSENRSAVAREACRCVAVLARCLADHFGALAELWLPELLRNTTR-AVVVAAAGDEAARAIFGCTTAGFARLLPCLIDTARNKSAAIRRRCLDYIMLALARWGDVAFDRYLPQLRNMIATAVGDADGSTRATARRAFWVLKKRFPELSQSIMDSLSPSMQ 1758
A S++ + L+S+DTK+RLQ G DIL T+ E + + LV L +N KV + GL L L + ++ T+ AVV+ G SK V+E+ FLL + S V + + L P F H+NWRVRE++++ L +E GA + L + L+D SQVR +A T+VE+ G+ L L +I +L+TKF+ + SG + S Q+P S + D ++Q + N+ L KS +R S L K ++ +A T A E+ E + +++ + ++V E+ ++ L + S+ W+ + AM+RL V + G A ++ L + + + + V + RS + REAC +A L++ L AEL LP L+ A ++++AG A R I T RL+P + +KS IRR C +++ L W +R++ +++ I + DAD RA +R+AFW F + + S+++SL S Q
Sbjct: 2 ATSLDAFIPQLKSQDTKKRLQLGSDILNYLEDPTNSVETEDLGFFIDSLVSWLNSSNCKVAQNGLEILGILSERLREHFRHYIHTVFSAVVDRLGDSKDQVREQAKTFLLKLMSDVAS-PQYVFEKLVPAFGHRNWRVREEVMICLKETLERHGAHSLSITK--LLPSIIKLLSDPNSQVRD---MAVSTIVEIYKYIGDRLQHDLNKKYNIPAPKLHMLMTKFEE--VKNSGGLLPSADQDPLGTYSHDDI--DSRSQHSE----NSDLEGS-FKSSKR-----------------ASXXXXXXXXXXXLAK-------SSLSASTAAGAAD------------------------EEMFIRCFEDVPRIQLYSAKEVEHEISKIRDTLGDPSNHWEKRLDAMKRLRSVLIAG-APDYDELYQSIRQLEIPFQLS--VKDLRSQIVREACITIAYLSQQLGPRLDHFAELLLPSLINLIPNSAKIMSSAGIVAIRFIIQHTHVS--RLIPIITYNMTSKSKEIRRICCEFLDQLLHTWPTHTLERHVAHIQDAIKKGISDADPEARAFSRKAFWGFADHFKDQADSLLNSLDTSKQ 530 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig845.19827.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig845.19827.1 >prot_F-serratus_M_contig845.19827.1 ID=prot_F-serratus_M_contig845.19827.1|Name=mRNA_F-serratus_M_contig845.19827.1|organism=Fucus serratus male|type=polypeptide|length=1666bp MDAPSMNNLVEDLESKDTKRRLQGLDILEQSLRQTSPAEDSWKQVVAPLVback to top mRNA from alignment at F-serratus_M_contig845:261902..271468+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig845.19827.1 ID=mRNA_F-serratus_M_contig845.19827.1|Name=mRNA_F-serratus_M_contig845.19827.1|organism=Fucus serratus male|type=mRNA|length=9567bp|location=Sequence derived from alignment at F-serratus_M_contig845:261902..271468+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig845:261902..271468+ >mRNA_F-serratus_M_contig845.19827.1 ID=mRNA_F-serratus_M_contig845.19827.1|Name=mRNA_F-serratus_M_contig845.19827.1|organism=Fucus serratus male|type=CDS|length=9996bp|location=Sequence derived from alignment at F-serratus_M_contig845:261902..271468+ (Fucus serratus male)back to top |