prot_F-serratus_M_contig845.19821.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig845.19821.1
Unique Nameprot_F-serratus_M_contig845.19821.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length218
Homology
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: D8LKV0_ECTSI (High mobility group protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV0_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 5.210e-87
Identity = 132/170 (77.65%), Postives = 151/170 (88.82%), Query Frame = 0
Query:   48 AYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVWKRGGQPSV 217
            AYKKAPDAPRRGRSAYVLFSM+ARE+VK +LP G+KVTEVMKGIAA+WREL+  +K +W  KAA+DKDRYEQEL+VY+GPLKV NKRAKKDP APKRAMSAFLHFSQSMRPRLR TYP+AKNMDMSKMLG+EWNRM+D+EK PYQ KA  D+ RY+EAM VWK GG  ++
Sbjct:   46 AYKKAPDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKDGGADAL 215          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: F0W3U4_9STRA (High mobility group protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3U4_9STRA)

HSP 1 Score: 186 bits (473), Expect = 6.120e-56
Identity = 93/166 (56.02%), Postives = 121/166 (72.89%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            ++KR  KKAP AP+RG+S Y+LFSMD RE++K+ +P  AKVT+VM+ IA  W +++  EK  W++ A  DK RYE+E+A Y+GPL+V NKRAKKDPSAPKRA SAFL +SQ MRP+L+   PD KN D+SK LGE W++ TD +K PY  K   D +RYK  M  W
Sbjct:   25 KRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD)

HSP 1 Score: 181 bits (459), Expect = 6.850e-54
Identity = 89/166 (53.61%), Postives = 119/166 (71.69%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            ++KR  KKAP AP+RG+S Y+LFSMD RED+KA++P  AKVT+VM+ IA  W +++  +K  W+  A  DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++  + D KN ++SK LGE W++ TD++K P+  K   D  RYK  M  W
Sbjct:   22 KRKRLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREMEEW 187          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A024U6C4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6C4_9STRA)

HSP 1 Score: 180 bits (456), Expect = 2.070e-53
Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            +K+R  KKAP AP+RG+S Y+LFSMD RE++KA++ P AKVT+VM+ IA  W +++  EK+ W+T A  DK RYE+E+A Y+GPL+V NKRAKK P+APKRA SAFL +SQ MRPR+++ + + KN ++SK LGE W + T  +K P+  K   D  RYK  M  W
Sbjct:   25 KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKEKEDRARYKREMEEW 190          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC)

HSP 1 Score: 179 bits (454), Expect = 3.900e-53
Identity = 88/166 (53.01%), Postives = 119/166 (71.69%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            +K+R  KKAP AP+RG+S Y+LFSMD RE++KA++PP +KVT+VM+ IA  W +++  EK+ W+  A  DK RYE+E+A Y+GPL+V NKRAKK P+APKRA SAFL +SQ MRPR++  + D KN ++SK LGE W + T  +K P+  K   D  RYK  M  W
Sbjct:   21 KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 186          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA)

HSP 1 Score: 177 bits (450), Expect = 3.390e-52
Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            ++KR  KKAP AP+RG+S Y+LFSMD RE++KA++P  +KVT+VM+ IA  W ++   +K  W+  A  DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++  + D KN ++SK LGE W + TD++K P+  K   D  RYK  M  W
Sbjct:   47 KRKRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREMEEW 212          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A1V9ZRB9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRB9_9STRA)

HSP 1 Score: 183 bits (464), Expect = 3.540e-52
Identity = 89/166 (53.61%), Postives = 120/166 (72.29%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            +K+R  KKAP AP+RG+S Y+LFSMD RE++KA++PP +KVT+VM+ IA  W +++  EK+ W+  A  DK RYE+E+A Y+GPL+V NKRAKK P+APKRA SAFL +SQ MRPR++  +PD KN ++SK LGE W + T  +K P+  K   D  RYK  M  W
Sbjct:   20 KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIAEAWSKMSEDEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHPDMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 185          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A8K1CAL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAL6_PYTOL)

HSP 1 Score: 176 bits (447), Expect = 4.310e-52
Identity = 87/168 (51.79%), Postives = 119/168 (70.83%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVWKR 211
            ++KR  KKAP AP+RG+S Y+LFSMD RE +KA+L   AKVT++M+ IA  W +++  +K  W+  A +DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++  +PD KN ++SK LGE W + T+ +K P+  K   D +RYK  M  W +
Sbjct:   24 KRKRLQKKAPGAPKRGKSPYILFSMDKREAIKATLGADAKVTDIMRAIANAWAKMSDDDKQPWKLAAEQDKQRYEEEMASYDGPLRVPNKRAKKHPEAPKRASSAFLFYSQVMRPRIKADHPDMKNTEISKQLGEAWGKATEAQKAPFIEKEKEDRDRYKREMEEWNQ 191          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A3R7KJP5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJP5_9STRA)

HSP 1 Score: 176 bits (446), Expect = 1.140e-51
Identity = 93/186 (50.00%), Postives = 125/186 (67.20%), Query Frame = 0
Query:   24 DDTEAIGAGGGSSAPRQRKMRKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            D  E +GA   +  P   K RK R  KKAP AP+RG+S Y+LFSM+ RE++KA++P  +KVT+VM+ IA  W +++  +K  W+  A  DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++  + D KN ++SK LGE W + TD++K P+  K   D  RYK  M  W
Sbjct:    6 DTKEHVGAAWVAVKPEGNKKRK-RLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREMEEW 190          
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: M4BDC0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BDC0_HYAAE)

HSP 1 Score: 176 bits (447), Expect = 1.140e-51
Identity = 86/166 (51.81%), Postives = 117/166 (70.48%), Query Frame = 0
Query:   44 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 209
            ++KR  KKAP AP+RG+S Y+LFSM+ RE++KA++P  +KVT+VM+ IA  W ++   +K  W+  A  DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++  + D KN ++SK LGE W + TD++K P+  K   D  RYK  M  W
Sbjct:   54 KRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDDDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKVDRARYKREMEEW 219          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKV0_ECTSI5.210e-8777.65High mobility group protein n=2 Tax=Ectocarpus Tax... [more]
F0W3U4_9STRA6.120e-5656.02High mobility group protein putative n=2 Tax=Albug... [more]
K3WVY6_GLOUD6.850e-5453.61Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024U6C4_9STRA2.070e-5353.01Uncharacterized protein n=4 Tax=Aphanomyces TaxID=... [more]
A0A067C9M6_SAPPC3.900e-5353.01Uncharacterized protein n=3 Tax=Saprolegniaceae Ta... [more]
A0A5D6YAG9_9STRA3.390e-5252.41Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A1V9ZRB9_9STRA3.540e-5253.61Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A8K1CAL6_PYTOL4.310e-5251.79Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3R7KJP5_9STRA1.140e-5150.00Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
M4BDC0_HYAAE1.140e-5151.81Uncharacterized protein n=22 Tax=Peronosporaceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00886HIGHMOBLTY12coord: 175..194
score: 43.89
coord: 194..214
score: 28.92
coord: 157..175
score: 26.32
coord: 86..108
score: 29.79
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 132..210
NoneNo IPR availablePANTHERPTHR13711SWI/SNF-RELATED CHROMATIN BINDING PROTEINcoord: 132..210
coord: 37..125
NoneNo IPR availablePANTHERPTHR13711:SF302HIGH MOBILITY GROUP PROTEIN DSP1-RELATEDcoord: 37..125
IPR009071High mobility group box domainSMARTSM00398hmgende2coord: 141..211
e-value: 6.7E-19
score: 78.8
coord: 55..126
e-value: 7.1E-15
score: 65.4
IPR009071High mobility group box domainPFAMPF00505HMG_boxcoord: 56..124
e-value: 3.2E-15
score: 56.3
coord: 142..210
e-value: 1.6E-20
score: 73.3
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 56..125
score: 16.818
IPR009071High mobility group box domainPROSITEPS50118HMG_BOX_2coord: 142..210
score: 18.28
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 39..130
e-value: 4.1E-22
score: 80.2
IPR036910High mobility group box domain superfamilyGENE3D1.10.30.10coord: 131..213
e-value: 1.0E-24
score: 88.7
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 133..213
IPR036910High mobility group box domain superfamilySUPERFAMILY47095HMG-boxcoord: 45..128

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig845contigF-serratus_M_contig845:90736..94582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig845.19821.1mRNA_F-serratus_M_contig845.19821.1Fucus serratus malemRNAF-serratus_M_contig845 88994..94651 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig845.19821.1 ID=prot_F-serratus_M_contig845.19821.1|Name=mRNA_F-serratus_M_contig845.19821.1|organism=Fucus serratus male|type=polypeptide|length=218bp
MSYEDNEDHSYEDNYDGAGEDEMDDTEAIGAGGGSSAPRQRKMRKKRAYK
KAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNG
GEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFL
HFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSN
RYKEAMAVWKRGGQPSV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009071HMG_box_dom
IPR036910HMG_box_dom_sf