mRNA_F-serratus_M_contig845.19821.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: D8LKV0_ECTSI (High mobility group protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKV0_ECTSI) HSP 1 Score: 266 bits (679), Expect = 1.040e-79 Identity = 132/166 (79.52%), Postives = 149/166 (89.76%), Query Frame = 1
Query: 211 AYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVWKRGG 708
AYKKAPDAPRRGRSAYVLFSM+ARE+VK +LP G+KVTEVMKGIAA+WREL+ +K +W KAA+DKDRYEQEL+VY+GPLKV NKRAKKDP APKRAMSAFLHFSQSMRPRLR TYP+AKNMDMSKMLG+EWNRM+D+EK PYQ KA D+ RY+EAM VWK GG
Sbjct: 46 AYKKAPDAPRRGRSAYVLFSMEAREEVKNALPEGSKVTEVMKGIAAKWRELSETDKEEWTAKAAQDKDRYEQELSVYDGPLKVPNKRAKKDPLAPKRAMSAFLHFSQSMRPRLRETYPEAKNMDMSKMLGQEWNRMSDEEKLPYQTKAHDDTLRYREAMTVWKDGG 211
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: F0W3U4_9STRA (High mobility group protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0W3U4_9STRA) HSP 1 Score: 187 bits (474), Expect = 1.430e-50 Identity = 93/166 (56.02%), Postives = 121/166 (72.89%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
++KR KKAP AP+RG+S Y+LFSMD RE++K+ +P AKVT+VM+ IA W +++ EK W++ A DK RYE+E+A Y+GPL+V NKRAKKDPSAPKRA SAFL +SQ MRP+L+ PD KN D+SK LGE W++ TD +K PY K D +RYK M W
Sbjct: 25 KRKRLQKKAPGAPKRGKSPYILFSMDKREEIKSHMPADAKVTDVMRAIADAWSKMSEDEKQPWKSAAEVDKQRYEEEMASYDGPLRVPNKRAKKDPSAPKRASSAFLFYSQVMRPQLKKENPDLKNTDISKRLGEAWSKATDVQKAPYVEKEREDRSRYKREMEEW 190
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: K3WVY6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVY6_GLOUD) HSP 1 Score: 181 bits (460), Expect = 1.090e-48 Identity = 89/166 (53.61%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
++KR KKAP AP+RG+S Y+LFSMD RED+KA++P AKVT+VM+ IA W +++ +K W+ A DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++ + D KN ++SK LGE W++ TD++K P+ K D RYK M W
Sbjct: 22 KRKRLQKKAPGAPKRGKSPYILFSMDKREDIKATMPENAKVTDVMRAIADAWAKMSDDDKQPWKAAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWSKATDEQKAPFVEKEKLDRARYKREMEEW 187
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A024U6C4_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U6C4_9STRA) HSP 1 Score: 180 bits (457), Expect = 3.010e-48 Identity = 88/166 (53.01%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
+K+R KKAP AP+RG+S Y+LFSMD RE++KA++ P AKVT+VM+ IA W +++ EK+ W+T A DK RYE+E+A Y+GPL+V NKRAKK P+APKRA SAFL +SQ MRPR+++ + + KN ++SK LGE W + T +K P+ K D RYK M W
Sbjct: 25 KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMAPNAKVTDVMRAIADAWSKMSEDEKAPWKTAAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKSEHQEMKNTEISKQLGEAWGKATKAQKAPFVEKEKEDRARYKREMEEW 190
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A067C9M6_SAPPC (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C9M6_SAPPC) HSP 1 Score: 179 bits (455), Expect = 5.360e-48 Identity = 88/166 (53.01%), Postives = 119/166 (71.69%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
+K+R KKAP AP+RG+S Y+LFSMD RE++KA++PP +KVT+VM+ IA W +++ EK+ W+ A DK RYE+E+A Y+GPL+V NKRAKK P+APKRA SAFL +SQ MRPR++ + D KN ++SK LGE W + T +K P+ K D RYK M W
Sbjct: 21 KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIADAWSKMSEEEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHADMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 186
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A5D6YAG9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAG9_9STRA) HSP 1 Score: 178 bits (451), Expect = 4.170e-47 Identity = 87/166 (52.41%), Postives = 117/166 (70.48%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
++KR KKAP AP+RG+S Y+LFSMD RE++KA++P +KVT+VM+ IA W ++ +K W+ A DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++ + D KN ++SK LGE W + TD++K P+ K D RYK M W
Sbjct: 47 KRKRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPDNSKVTDVMRAIADAWAKMTDEDKQPWKAAAESDKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKLDRARYKREMEEW 212
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A8K1CAL6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CAL6_PYTOL) HSP 1 Score: 177 bits (448), Expect = 4.850e-47 Identity = 87/168 (51.79%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVWKR 702
++KR KKAP AP+RG+S Y+LFSMD RE +KA+L AKVT++M+ IA W +++ +K W+ A +DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++ +PD KN ++SK LGE W + T+ +K P+ K D +RYK M W +
Sbjct: 24 KRKRLQKKAPGAPKRGKSPYILFSMDKREAIKATLGADAKVTDIMRAIANAWAKMSDDDKQPWKLAAEQDKQRYEEEMASYDGPLRVPNKRAKKHPEAPKRASSAFLFYSQVMRPRIKADHPDMKNTEISKQLGEAWGKATEAQKAPFIEKEKEDRDRYKREMEEWNQ 191
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A1V9ZRB9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZRB9_9STRA) HSP 1 Score: 183 bits (465), Expect = 6.710e-47 Identity = 89/166 (53.61%), Postives = 120/166 (72.29%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
+K+R KKAP AP+RG+S Y+LFSMD RE++KA++PP +KVT+VM+ IA W +++ EK+ W+ A DK RYE+E+A Y+GPL+V NKRAKK P+APKRA SAFL +SQ MRPR++ +PD KN ++SK LGE W + T +K P+ K D RYK M W
Sbjct: 20 KKRRLQKKAPGAPKRGKSPYILFSMDKREEIKATMPPNSKVTDVMRAIAEAWSKMSEDEKAPWKLSAESDKQRYEEEMATYDGPLRVPNKRAKKHPNAPKRASSAFLFYSQVMRPRIKAEHPDMKNTEISKQLGEAWAKATKAQKAPFVEKEKEDRARYKREMEEW 185
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: A0A3R7KJP5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KJP5_9STRA) HSP 1 Score: 176 bits (447), Expect = 1.250e-46 Identity = 93/186 (50.00%), Postives = 125/186 (67.20%), Query Frame = 1
Query: 139 DDTEAIGAGGGSSAPRQRKMRKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
D E +GA + P K RK R KKAP AP+RG+S Y+LFSM+ RE++KA++P +KVT+VM+ IA W +++ +K W+ A DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++ + D KN ++SK LGE W + TD++K P+ K D RYK M W
Sbjct: 6 DTKEHVGAAWVAVKPEGNKKRK-RLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMSDEDKQPWKVAAEADKQRYEEEMASYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWAKATDEQKAPFVEKEKVDRARYKREMEEW 190
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Match: M4BDC0_HYAAE (Uncharacterized protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=M4BDC0_HYAAE) HSP 1 Score: 177 bits (448), Expect = 1.290e-46 Identity = 86/166 (51.81%), Postives = 117/166 (70.48%), Query Frame = 1
Query: 199 RKKRAYKKAPDAPRRGRSAYVLFSMDAREDVKASLPPGAKVTEVMKGIAARWRELNGGEKSQWETKAAKDKDRYEQELAVYEGPLKVANKRAKKDPSAPKRAMSAFLHFSQSMRPRLRNTYPDAKNMDMSKMLGEEWNRMTDDEKRPYQAKAASDSNRYKEAMAVW 696
++KR KKAP AP+RG+S Y+LFSM+ RE++KA++P +KVT+VM+ IA W ++ +K W+ A DK RYE+E+A Y+GPL+V NKRAKK P APKRA SAFL +SQ MRPR++ + D KN ++SK LGE W + TD++K P+ K D RYK M W
Sbjct: 54 KRKRLQKKAPGAPKRGKSPYILFSMEKREEIKATMPENSKVTDVMRAIADAWGKMGDDDKQPWKVAAEADKQRYEEEMAAYDGPLRVPNKRAKKHPDAPKRASSAFLFYSQVMRPRIKAEHQDMKNTEISKQLGEAWGKATDEQKAPFVEKEKVDRARYKREMEEW 219 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig845.19821.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig845.19821.1 >prot_F-serratus_M_contig845.19821.1 ID=prot_F-serratus_M_contig845.19821.1|Name=mRNA_F-serratus_M_contig845.19821.1|organism=Fucus serratus male|type=polypeptide|length=218bp MSYEDNEDHSYEDNYDGAGEDEMDDTEAIGAGGGSSAPRQRKMRKKRAYKback to top mRNA from alignment at F-serratus_M_contig845:88994..94651- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig845.19821.1 ID=mRNA_F-serratus_M_contig845.19821.1|Name=mRNA_F-serratus_M_contig845.19821.1|organism=Fucus serratus male|type=mRNA|length=5658bp|location=Sequence derived from alignment at F-serratus_M_contig845:88994..94651- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig845:88994..94651- >mRNA_F-serratus_M_contig845.19821.1 ID=mRNA_F-serratus_M_contig845.19821.1|Name=mRNA_F-serratus_M_contig845.19821.1|organism=Fucus serratus male|type=CDS|length=1308bp|location=Sequence derived from alignment at F-serratus_M_contig845:88994..94651- (Fucus serratus male)back to top |