mRNA_F-serratus_M_contig1261.1981.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1261.1981.1 vs. uniprot
Match: D8LEE2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE2_ECTSI) HSP 1 Score: 813 bits (2099), Expect = 1.820e-254 Identity = 751/1689 (44.46%), Postives = 879/1689 (52.04%), Query Frame = 3
Query: 372 PRQADDVAKMKALGKDGKWRQALDVLERLEEDATAS--GDRS-LFPGLEVFNAAIAAVXXXXXXXXXXXXXEGMRSAGVAPDVVTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------MEANPRGEARPEPLSXXXXXXXXXXXXXXXXXXXXXXXXXAKGLQPTVFSFRYALAAFCNSS-------GGGR---AXXXXXXXXXXXXXXXXXXXXDAPCYKHAVDIAAKAGEVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRTFAVAMTACARGGAPREAFRLLAELKREGRSDGGEDVLPNTVVYNTLLALCKGKPLSRDR---RDTTRGVAVETVEGNHNGSGSHGLGVNGGVAFSVVDTAGAAVGGAPCADPPGVVLGKEEVGDGAGDAVESEWGRRPDELVAKAVGLLHEMTLAGGQSTPDKMSFELAMQACVNAGRPESALKVFDAMRRWTA--------TLATADGDGGDARGGGVAARGVCAKPERATYRLGLTAAAAAGDGEAAAEMLNDMRCAGIVVDESTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALEMLDRARPDLREVISRERSLAEGGA------RSVGDAIPAYTLAMVACRVAGRPTEGLEVFWIMEEDGGRGDRPFFLATLACCAICAAFEAEDSTRRAGDSEGEEGRGSPWGRTCGATVADRVLKLASAQGHSLGVEGFTDAARAFGHAGRWEDALALLYDATAAGVEPDERMYCAVIDAMGENGAWCEVVDLVQTMRTRAASNAAGDVESDPDKISGKGCCSPDNRGRQALLLALPPPSWPRRAVYGCACHACAHGGDWRAVLALIDDMRRDGVDRDPAVYASAMRAFVEAGEWERAVDLVTVEMELDGVSPDVRSYSQALRACRLGASGDGRAARLAQALVSEMEEKGLGQDMTCLEGAARACLADGRPDLGLGFVSQALEDFRRNSAEM---GLVGEERGFADAQRLETTKISLLGRCGRWEEALDTLDTMREEHGPR-LNERAFVFAARACAFAGQWPVVQVLLSEVSSVVLSEDAPLVSPEALWDMRRALLAGLTAAGLWRRALREIRDMYGQEVGRLECDGDGLDLYAGLQEREVRAGISARDALMRRHQRRMLKDYRTVMHSCLRARAWDQVLHLWSELTAQQSHHAPPLKPCAATYALVLRACGALGCWTAARDLVTEMRSA--GGE-----LAPGTAHYALAACAAAVADDEA--DEAS-SGRE-WGEAGERRGSDGRGNGVNEGEKDGGTASRCVGSRGVYSVRDTRLRDLLSEMVVDG---VVPGWELYAAVCWARSQQKRWSRASLGVLELMDEVGLGGLGDASVESRTFAGGDSGHGAAAVTLGHRRAKMRSEGAQNLYARLLAAAGKVPHATVEGQDPGYAVRRVLIDANERLGSAGPQ----------VYAAAARAFARARDWQGARDSAVRL-----------LSFERSSLEAIANTASAASDAISAAVGACARAGELDEAESLVNLARNVVTDSVPVATDGGEGDHVH------SDLEGFTKPDGAEPG---AGLDRKACLELVKAYERIGRLDDAEALRLRLQGALAARFGVETVGAGEPPPVAVA 5171
PR ADD+A MKALGK+GKWR+A+ VL +L+EDA+A+ GD S L P L V+N XXXXXXXXXXXXXE MRSAGV PDV XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXX M A+PR EA+PE LS AKGL+PTV SFRYAL A +SS G G A D CYK AVD AAKAG+V XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX V PNTVVYNTLLALC+GKPL R +G+G + G G V+ G AVG P G + G G E RPDELV AV LLHEMT+ G + PDKMSFEL MQACVNAGRPESALKVF AM R A RG R V +P+RAT+RLGLTAAA AGDG AAA +L +MR AGI +DES AL +L RP L++ +S G R G+ + AYTLAMVACR +GR +EGL V ++EEDGG GD FF L CCA GE G S GA VADRVL+ SAQG GVEGFTD A+A+G AGRWEDALALL A A PDERMYC+VI+AMGE+GAW V+L+Q+MR R S +L PP P RA YGCAC ACA G+W AVL LI+DMR DG++RD +VYASAMRAFVEAG+WERAV++VTVEME DGVSPD S+ QALRACR GA G GRAA+LA ALV E+ +GL + LE AARACLAD RP+L L VS+ L+ +RR S G G G + QRLET +I++LGR GRWE++L+ LD MR + G L+ERAFV AARACA AG+W ++QVL SE S+V D VSP + WDM+RALL+GLT AG+WRRA+ +R+M+ G G + G+ + QRRM KD+R+VMH+CLRA AWD+ L +WS+L +S P+ PC TY LRACG LG W ARDL++EMR G E L P HYA A AA VADD + +EA+ SGR WG G DG DGG+ + LR +LS+M G V GWE YAAVCWARSQ+K+W RASLGVLELM E G G D ++ + A EG ++LY RLLAAA K+P V AAAA AFARA DW+GARD AVR S A+ + A+ +S AV A ARAGEL EAE+L LAR + T + A+ G SD E G E G D +A + L AYER GRL DAE LR RLQG +A+ G+E AG VA A
Sbjct: 199 PRVADDIAAMKALGKEGKWREAVAVLSQLKEDASAASNGDGSDLAPNLAVYNXXXXXXXXXXXXXXXXXXXEEMRSAGVQPDVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXITGCSCGPXXXXXXXXXXGEVERALRLLEEMAADPRPEAQPEALSYTLVLKACGREGRWETALQLLTEMQAKGLEPTVLSFRYALTACASSSSSRGVSGGSGEEDFAGVWERCRSLMDAMGRLGLEPDRLCYKQAVDAAAKAGDVGAALDLMDGMENCEGFRGAVEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-----VRPNTVVYNTLLALCRGKPLRGVRGGXXXXXXXXXXXXXXXXXDGTGPNLNGYGGXGGLEEVNGHGVAVG-----MPDGRAIRNGVSVPGGGTVGSRE---RPDELVGTAVALLHEMTVGGSECAPDKMSFELVMQACVNAGRPESALKVFRAMARVAAGXXXXXXXXXXXXXXXXXXGRG-----RAVEVRPDRATFRLGLTAAAEAGDGPAAAVLLEEMRDAGIAMDESAFHLAATAFGRAGLWRQGVRVAVVAAEQGIALAPTTLTSILGACAKQARWREALGLLQGTRPVLQQGLSSLPLSTGAGVVAGNERRGEGNVVAAYTLAMVACRRSGRHSEGLRVLEMLEEDGGVGDEAFFRVALKCCAKAGGV-------------GERGDCS------GAAVADRVLEGMSAQGIRCGVEGFTDIAQAYGLAGRWEDALALLPRAAALAAVPDERMYCSVINAMGESGAWEAAVELIQSMRRRRPSXXXXXXXXXXXXXX---XXXXXXXXXXXXXXSLEPPP-PGRAAYGCACRACARKGEWGAVLGLIEDMREDGLERDSSVYASAMRAFVEAGDWERAVEIVTVEMERDGVSPDALSFGQALRACRAGADGSGRAAQLALALVGEVRSRGLEPGVVILESAARACLADDRPELALDIVSETLDSWRRGSLGGDGDGGGGRRWGIDEVQRLETMRITVLGRLGRWEDSLEALDAMRAKFGDDDLDERAFVSAARACAAAGEWSLIQVLQSEASAV---GDGDGVSPGSAWDMQRALLSGLTTAGMWRRAMGMLREMHHGGGGDTVMPAAGEERGQGMPDPSPH------------WQRRMFKDHRSVMHACLRAGAWDKALSVWSDL---RSIVEGPI-PCGRTYTAALRACGPLGLWATARDLLSEMRDGAEGAEGDGLLLLPEARHYAFAVSAATVADDISSYEEATLSGRGGWGAGGSDAVVDG----------DGGSGNAA-------------LRSVLSDMAAGGGGGVEIGWETYAAVCWARSQRKQWHRASLGVLELMGEHGFG---DGALGTEEAA----------------------EGMRSLYRRLLAAASKIPRFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLAAAATAFARAGDWEGARDIAVRFDPRVGGPTAGGASSGTGEPSAVRRRTADAAAVVSVAVAATARAGELVEAEALAELARVIATTAEVSASSSGXXXXXXXSRSRGSDGEEARVSRGTERSNNPLGFDHRAGVALADAYERAGRLSDAEGLRSRLQGRMASSLGLEEA-AGVEGGVAAA 1778
BLAST of mRNA_F-serratus_M_contig1261.1981.1 vs. uniprot
Match: A0A812UWE9_9DINO (EMB2654 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812UWE9_9DINO) HSP 1 Score: 67.8 bits (164), Expect = 2.450e-7 Identity = 111/480 (23.12%), Postives = 173/480 (36.04%), Query Frame = 3
Query: 2550 VLKLASAQGHSLGVEGFTDAARAFGHAGRWEDALALLYDATAAGVEPDERMYCAVIDAMGENGAWCEVVDLVQTMRTRAASNAAGDVESDPDKISGKGCCSPDNRGRQALLLALPPPSWPRRAVYGCACHACAHGGDWRAVLALIDDMRRDGVDRDPAVYASAMRAFVEAGEWERAVDLVT---VEMELDGVSPDVRSYSQALRACRLGASGDGRAARLAQALVSEMEEKGLGQDMTCLE-GAARACLADGRPDLGLGFVSQALEDFRRNSAEMGLVGEERGFADAQRLETTKISLLGRCGRWEEALDTLDTMREEHGPRLNERAFVFAARACAFAGQWPVVQVLLSEV-SSVVLSEDAPLVSPEALWDMRRALLAGLTAAGLWRRALR-----EIRDMYGQEVGRLECD-----GDGLDLYAGLQEREVRAGIS-ARDALMRRHQRRMLKDYRTVMHSCLRARAWDQVLHLWSELTAQQ 3941
VL L + G V FT A G W+ A+ L+ +A +EPDER+Y A++ A E+ ++ L++ + + AA + E P+KI P A Y + GDW+ L L+ + G D A Y++ +R + W A+ L+ G +PD+ + A AC G R AL M+ G E G A A + D + ALE F + + E G A + LL R +W+ A+ L + + E+ A AC +V LL++ S L+ D M L + + +W++AL E+ D+ Q L D G L G ++ G +RDA Y + + RA W Q++ L S + A Q
Sbjct: 236 VLALMQSNGVEPTVVSFT---AAVGACSEWKQAMGLMAEALRCRLEPDERLYKALVWACREDFGVQQL--LLKEAAAKGLALAAEESEM-PEKIQ--------------------EPQLAGEAQYTAVLRSLQGAGDWQQALVLLSAVAAKGTQLDLAFYSTLLRVCRKGAAWSAALRLLEEARAAFAAQGQAPDIGMHLSAFYACAACKEG-----RSTLALFKTMQGAGFSPPREAFEAGLAAAAVTD---------WADALELFLEGLRKSVPLKPEAGEA--------VMELLAREAKWDAAVQLLAAIDRASSFQRTEQLLTAAMSACRKRXXXXLVLGLLTQARESRSLTVDL---------GMYNHALGACSRSQVWQQALAVWAQMELLDLPDQRSYALLIDACRRRGGAKHLVPGFVKKAESKGCRLSRDA------------YCEAVRTQQRASQWQQMVLLLSSMEAMQ 646
BLAST of mRNA_F-serratus_M_contig1261.1981.1 vs. uniprot
Match: A0A7S2RIC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RIC2_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 4.770e-5 Identity = 93/352 (26.42%), Postives = 124/352 (35.23%), Query Frame = 3
Query: 2628 AGRWEDALALLYDATAAGVEPDERMYCAVIDAMGE-------------------------NGAWCEVVDLVQTMRTRAASNAAGDVESDPDKISGKGCCSPDNR---GRQ--ALLLALPPPSWPRRAVYGCACHACAHGGDWRAVLALIDDMRRDGVDRDPAVYASAMRAFVEAGEWERAVDLVTVEMELDGVSPDVRSYSQALRACRLGASGDGRAARLAQALVSEMEEKGLGQDMTCLEGAARACLADGRPDLG--LGFVSQALEDFRRNSAEMGLVGEERGFADAQRLETTKISLLGRCGRWEEALDTLDTMRE-EHGPRLNERAFVFAARACAFAGQWPVVQVLLSEV 3584
AGRW +AL LLY A GV+PD+ Y A I A R R + G + G SP R GR+ A L + W A G RA L L+++M+ DG+ + + +A+ A G W RA+ L+ E+ G + Y+ AL AC G A AL+ ME D E A + R +L LG D R +A + G+ A R E K W AL+ LD R+ R N A+ A ACA GQW LL E+
Sbjct: 38 AGRWLEALQLLYAAKTRGVKPDKFTYAAAISACARAKPPKAEKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGRLRRPNTGRGQQRRGAE---GGSAASPATRKAGGREGTASLDNVIADMWRSTK---------ARTGPERA-LELLEEMQADGIKPNGRTFGTAITACASRGLWRRALGLLVTAREM-GYDLGLAVYNSALYACERGGQP-----LHALALLQFMENDQAWVDAWESESLVAAMASTARQELWAQLGDRPTPAPDVRSYTAVISAFGK------AMRNERPKEGSGYAVEWWRVALEVLDRSRQGAPAARPNLFAYSAAISACARGGQWRPAMNLLDEM 364 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1261.1981.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1261.1981.1 >prot_F-serratus_M_contig1261.1981.1 ID=prot_F-serratus_M_contig1261.1981.1|Name=mRNA_F-serratus_M_contig1261.1981.1|organism=Fucus serratus male|type=polypeptide|length=1819bp MGLQTRLPRCRGGAGGAACRGQRTGQVFKPHAAGRKRNDNPSSNFAEEIDback to top mRNA from alignment at F-serratus_M_contig1261:167192..185598+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1261.1981.1 ID=mRNA_F-serratus_M_contig1261.1981.1|Name=mRNA_F-serratus_M_contig1261.1981.1|organism=Fucus serratus male|type=mRNA|length=18407bp|location=Sequence derived from alignment at F-serratus_M_contig1261:167192..185598+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1261:167192..185598+ >mRNA_F-serratus_M_contig1261.1981.1 ID=mRNA_F-serratus_M_contig1261.1981.1|Name=mRNA_F-serratus_M_contig1261.1981.1|organism=Fucus serratus male|type=CDS|length=10914bp|location=Sequence derived from alignment at F-serratus_M_contig1261:167192..185598+ (Fucus serratus male)back to top |