mRNA_F-serratus_M_contig842.19806.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: D7FGU4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGU4_ECTSI) HSP 1 Score: 281 bits (718), Expect = 1.050e-90 Identity = 132/179 (73.74%), Postives = 153/179 (85.47%), Query Frame = 2
Query: 26 MVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPA---GCAVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEEHLAFMWGAFDQLMSRCPSSS 553
M+PWRDWDEW VK LLFSPDPYLR QGVQHVA W+SRER PHA+E TSQLVEVRLNDVG A G A +R E+ELRL YS VV+RAVNGLTGHEQK A+A+PVSSLA++IGLP+W+VDIRHEA+HKQLPG+V LRLAADFLVD+LWRR+W+PQ EHL F+WGAFDQL+ R ++S
Sbjct: 1 MIPWRDWDEWYRVKALLFSPDPYLRTQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDVGAAKGGGLAFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVSLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLIGRYKATS 179
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: A0A6H5JW11_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW11_9PHAE) HSP 1 Score: 281 bits (720), Expect = 1.910e-86 Identity = 131/183 (71.58%), Postives = 154/183 (84.15%), Query Frame = 2
Query: 14 HTPRMVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPAG---CAVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEEHLAFMWGAFDQLMSRCPSSS 553
+ PRM+PWRDWDEW VK LLFSP+PYLR QGVQHVA W+SRER PHA+E TSQLVEVRLND G AG +R E+ELRL YS VV+RAVNGLTGHEQK A+A+PVSSLA++IGLP+W+VDIRHEA+HKQLPG+V LRLAADFLVD+LWRR+W+PQ EHL F+WGAFDQL+ R ++S
Sbjct: 12 YIPRMIPWRDWDEWYRVKALLFSPEPYLRSQGVQHVAVWQSRERIPHAVETTSQLVEVRLNDAGAAGRGGLTFHGGQRSEEELRLIYSAVVVRAVNGLTGHEQKAAHAAPVSSLAREIGLPTWIVDIRHEAAHKQLPGIVTLRLAADFLVDYLWRRHWSPQAEHLGFVWGAFDQLICRYKATS 194
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: A0A835YSI0_9STRA (Las1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSI0_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.820e-49 Identity = 81/162 (50.00%), Postives = 115/162 (70.99%), Query Frame = 2
Query: 20 PRMVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPAGCAVASPRRGED--ELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEEHL 499
PR++PW++WDEW V+ LL+SPDP R +GV VAAWR RER PHA+E T+QLVEV L++ C+ + G + +LRL YS V++R VNGL QK A+A + +A+ IG+PSW+VD+RH+A+HK +P L RLA+ FL+D+L +RYW Q+++L
Sbjct: 8 PRLLPWQNWDEWVHVRGLLWSPDPVDRNEGVLRVAAWRCRERVPHAVECTAQLVEVALHEWR---CSTYPGQYGRNSLQLRLMYSSVIVRTVNGLVEAHQKCAHAISIQQIARQIGIPSWLVDLRHDAAHKDMPSLASFRLASAFLLDYLSQRYWDVQQQNL 166
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: A0A7S2RN98_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RN98_9STRA) HSP 1 Score: 149 bits (377), Expect = 7.730e-41 Identity = 83/187 (44.39%), Postives = 112/187 (59.89%), Query Frame = 2
Query: 20 PRMVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPAGCAVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEEHLAFMWGAFDQLMSRCPSS-SPFFQCKSR 577
PR++PW+ WDEW V+ LFS DP L+ V VAAWR R R PHA+E T+QLVEV L+D G G + E L+ YS+ V+RAVNG+ EQ+ A AS VS +A +GLP+W+VD+RH+A+H +P L LR+AA LV + + YW Q L + L S C S + C++R
Sbjct: 19 PRVLPWQHWDEWFEVRDSLFSGDPLLQRAAVARVAAWRVRGRVPHAVESTAQLVEVMLDDQGRDGLS-------ELVLQSCYSLSVVRAVNGVADAEQRGATASSVSLMASRVGLPTWLVDLRHDATHNAMPPLQTLRVAAQTLVHWFFEGYWTSQTRQL-------ESLESLCVSVVQRYHSCQNR 191
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: A0A329SSQ6_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SSQ6_9STRA) HSP 1 Score: 148 bits (374), Expect = 1.090e-37 Identity = 86/199 (43.22%), Postives = 117/199 (58.79%), Query Frame = 2
Query: 29 VPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPAGC--AVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEE------HLAFMWGAFDQL--MSRCPSSSPFFQCKSRVLPCPT 595
VPW DW EW V + LFS DP+ + + V VA+WRSR + P AI T+QLVE++L+ AV R EL L Y+ V++R VNGL QK AYA VS+LA+ IG+P W+VD+RHE+SH QLP L +LR AA L+ +L YW QE+ H W F+QL +++ PS+ ++ +P PT
Sbjct: 8 VPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRMQLPVAINATAQLVELQLHQSMAQNHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYAMAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAARHLLAWLRSNYWGAQEDLVRGQVHHVAQW-LFEQLPHLNKQPSNEEMEVDAAQGIPTPT 205
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: W7TDD9_9STRA (Las1-like family expressed n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TDD9_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.090e-37 Identity = 77/162 (47.53%), Postives = 102/162 (62.96%), Query Frame = 2
Query: 17 TPRMVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPAGC-AVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEEHL 499
TPR++PW+DW EW LLFS D R QGV V AWR+R R P A++ T+ ++EV L DV P +V SP ELR YS+V++RA+NGL Q YA PV ++A +G+P W+VD+RHEA+H LP L LR+ A L+D+L R YW Q + L
Sbjct: 13 TPRVLPWQDWAEWTETSNLLFSIDIERRVQGVGRVKAWRARGRLPVAVDATAAILEVGLLDVHPNSTNSVRSPT----ELRYLYSMVLVRAINGLVEGCQTKFYAEPVHAVAARLGIPQWLVDLRHEATHASLPSLSALRMGAQHLLDWLHRGYWEKQGQDL 170
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: W2QXV9_PHYPN (Uncharacterized protein n=7 Tax=Phytophthora TaxID=4783 RepID=W2QXV9_PHYPN) HSP 1 Score: 145 bits (367), Expect = 1.090e-36 Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 2
Query: 29 VPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLND--VGPAGCAVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEE 493
+PW DW EW V + LFS DP+ + + V VA+WRSR + P AI T+QLVE++L++ AV R EL L Y+ V++R VNGL QK AYA+ VS+LA+ IG+P W+VD+RHE+SH QLP L +LR AA L+ +L YW QE+
Sbjct: 8 LPWLDWAEWQEVHVGLFSSDPFAQQRVVSRVASWRSRVQLPVAINATAQLVELQLHESMAQHHHHAVGVSSRSHMELSLLYASVIVRCVNGLVDGSQKGAYATAVSTLAQRIGIPLWIVDLRHESSHNQLPSLPVLRFAAQHLLAWLRSNYWGAQED 164
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: A0A7S0GXZ1_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0GXZ1_MICPS) HSP 1 Score: 137 bits (345), Expect = 1.450e-36 Identity = 69/163 (42.33%), Postives = 96/163 (58.90%), Query Frame = 2
Query: 23 RMVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPAG----CAVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEEHL 499
R VPWRDW EWD V++ L DP R + VA WR R R PHA++ T+ L+E R D G G E+ LRLAY+ ++R VNG QK YA+PV +LAK +G+P+ +VD+R ASH+++P L +LR A++ + +L+ RYW Q L
Sbjct: 5 RRVPWRDWAEWDRVRVGLCGDDPQARDASIARVADWRRRGRVPHAVDCTASLLETRSLDAGVPGNVGNVGSGGAPLSENMLRLAYAAALVRMVNGAVDPSQKGKYAAPVMTLAKRMGIPAVLVDVRMAASHQEMPALALLRHASERALQWLFERYWHAQANQL 167
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: A0A0N7L5Q0_PLAHL (Nuclear protein involved in cell morphogenesis and cell surface growth n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L5Q0_PLAHL) HSP 1 Score: 145 bits (365), Expect = 1.860e-36 Identity = 76/156 (48.72%), Postives = 98/156 (62.82%), Query Frame = 2
Query: 29 VPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLND--VGPAGCAVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQE 490
VPW DW EW V LFS DP+L+ + V VAAWRSR + P AI TSQLVE++L++ AV R EL L Y+ +++R VNGL QK YA VS+LA+ IG+P W+VD+RHE++H QLP L +LR AA L+ +L YW QE
Sbjct: 8 VPWVDWVEWQDVHESLFSTDPFLQQRAVSRVAAWRSRTQLPVAINATSQLVELQLHESMAQHHHHAVGVSSRSHSELSLLYANIIVRCVNGLVDASQKGEYAHAVSTLAQRIGIPLWIVDLRHESTHNQLPSLPVLRFAARHLLAWLRANYWNAQE 163
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Match: A0A7S0KN80_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0KN80_MICPS) HSP 1 Score: 145 bits (365), Expect = 1.950e-36 Identity = 71/159 (44.65%), Postives = 100/159 (62.89%), Query Frame = 2
Query: 23 RMVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQLVEVRLNDVGPAGCAVASPRRGEDELRLAYSIVVIRAVNGLTGHEQKTAYASPVSSLAKDIGLPSWVVDIRHEASHKQLPGLVILRLAADFLVDFLWRRYWAPQEEHL 499
R+VPWRDWDEW+ V++ L DP R + V AWR+R PHA+E+T+QL+E R +DVG G P + L+L Y++ ++R VNG Q YA+PV +LAK IG+P ++VDIR EASH++LP L LR ++ + +L+ RYW Q L
Sbjct: 12 RVVPWRDWDEWERVRVGLCGADPAARDVALARVDAWRTRGNVPHAVEVTAQLMECRKHDVGVPGSP--GPHLSDTMLQLTYAMCLVRMVNGAVDPSQNGKYAAPVMTLAKKIGIPVFLVDIRMEASHQELPSLATLRHGSERALQWLFERYWRAQRNVL 168 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig842.19806.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig842.19806.1 >prot_F-serratus_M_contig842.19806.1 ID=prot_F-serratus_M_contig842.19806.1|Name=mRNA_F-serratus_M_contig842.19806.1|organism=Fucus serratus male|type=polypeptide|length=215bp MVPWRDWDEWDMVKLLLFSPDPYLRCQGVQHVAAWRSRERTPHAIEITSQback to top mRNA from alignment at F-serratus_M_contig842:31489..34456- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig842.19806.1 ID=mRNA_F-serratus_M_contig842.19806.1|Name=mRNA_F-serratus_M_contig842.19806.1|organism=Fucus serratus male|type=mRNA|length=2968bp|location=Sequence derived from alignment at F-serratus_M_contig842:31489..34456- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig842:31489..34456- >mRNA_F-serratus_M_contig842.19806.1 ID=mRNA_F-serratus_M_contig842.19806.1|Name=mRNA_F-serratus_M_contig842.19806.1|organism=Fucus serratus male|type=CDS|length=1290bp|location=Sequence derived from alignment at F-serratus_M_contig842:31489..34456- (Fucus serratus male)back to top |