mRNA_F-serratus_M_contig841.19799.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: D7FV78_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV78_ECTSI) HSP 1 Score: 172 bits (435), Expect = 1.980e-44 Identity = 83/101 (82.18%), Postives = 94/101 (93.07%), Query Frame = 3
Query: 495 KIRAQMVARLLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR 797
K + Q+VARL KFNNEVVYE LLTP++PF+LDYLEVVFSLC+VMC IYAKF+EEECYKNA+VY GLVKVDNKIKHHIINVFAKEFTDMS NIA++ELKT+R
Sbjct: 195 KHQEQIVARLKKFNNEVVYENLLTPEVPFSLDYLEVVFSLCEVMCRIYAKFVEEECYKNAFVYDGLVKVDNKIKHHIINVFAKEFTDMSTNIAKDELKTLR 295
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A836CEB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEB8_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.770e-31 Identity = 61/96 (63.54%), Postives = 77/96 (80.21%), Query Frame = 3
Query: 510 MVARLLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR 797
+VARL KF +E+VYE LLTP +PFALDY EV FSLCD++C +Y K +EEECY N +V+ LVKVD K+K H++NV AKEFT+MSA IAR+EL +R
Sbjct: 130 VVARLCKFGSEMVYEHLLTPPLPFALDYFEVFFSLCDIICQVYNKLMEEECYSNVHVFEALVKVDAKVKRHVLNVTAKEFTEMSAKIARSELAALR 225
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A7S2CN58_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CN58_9STRA) HSP 1 Score: 109 bits (273), Expect = 3.400e-24 Identity = 52/94 (55.32%), Postives = 69/94 (73.40%), Query Frame = 3
Query: 516 ARLLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR 797
A L +F NEVVY L TP + F LDY EV+FSLCDV+ L+Y KF++EE ++N+ V+ LVK D++IKHH+IN+ AKE TD+S I RNE +R
Sbjct: 60 ANLYRFGNEVVYLHLQTPHVAFELDYREVLFSLCDVLSLLYNKFVDEEIWQNSAVFDMLVKADSRIKHHVINLLAKELTDLSTQILRNEFSALR 153
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A7S2GL83_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GL83_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.370e-20 Identity = 52/115 (45.22%), Postives = 74/115 (64.35%), Query Frame = 3
Query: 522 LLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR*RHVDNICRPRPP*SDLSSSSRT 866
L + ++E+VY L+TP +PF +DY+EV+ SLCDV+ L+Y K + E +++ VY LV+VD++IKHHIIN AKE TD+S +I R EL R H N P +D+ S T
Sbjct: 4 LFRSSHEIVYMHLVTPHVPFPIDYVEVIHSLCDVLVLVYHKLVHCESWQSPAVYDMLVRVDSRIKHHIINRIAKELTDLSISILRRELLEYR-IHPTNAAAAALPDADILLESDT 117
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A7S3MFY2_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MFY2_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.170e-15 Identity = 40/90 (44.44%), Postives = 59/90 (65.56%), Query Frame = 3
Query: 528 KFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR 797
KFNN VV+E L P +PF LDYLEV LC + +Y K + EECY N +Y +V++D ++KHHIIN+ +KE TD + ++ +++R
Sbjct: 173 KFNNAVVFEHLRLPHIPFELDYLEVFTGLCVELSKLYEKLIHEECYANQIIYDTIVRLDTRVKHHIINLVSKEVTDACSAKMKSNTRSLR 262
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A8K1C382_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C382_PYTOL) HSP 1 Score: 84.7 bits (208), Expect = 1.450e-13 Identity = 38/91 (41.76%), Postives = 65/91 (71.43%), Query Frame = 3
Query: 528 KFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEE-CYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR 797
K+N V+ +LLTP +PF LDY EV+ SLCD++ L+Y+KF+E+ C +N +++ +V+ D KIK +I+ KEF+ ++A++ +EL ++R
Sbjct: 311 KWNQRPVFRRLLTPSIPFPLDYREVMLSLCDILALVYSKFVEDNICSENIFLFQAIVRFDEKIKKLVIDPVKKEFSAVAASVLNDELTSVR 401
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A7R9Y7M0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9Y7M0_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.070e-13 Identity = 32/72 (44.44%), Postives = 53/72 (73.61%), Query Frame = 3
Query: 516 ARLLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIIN 731
A L +F++EV+YE+L PQ+ +DY E++ SLC+ + L+Y KFLE +CY NA ++ L+++D K+K H++N
Sbjct: 187 AGLYRFHSEVIYERLCLPQLSIEIDYFELIISLCETLTLLYKKFLESDCYSNALLFDALMRMDAKVKQHLVN 258
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A485KZ76_9STRA (Aste57867_13517 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZ76_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 5.660e-13 Identity = 41/117 (35.04%), Postives = 71/117 (60.68%), Query Frame = 3
Query: 453 VNVASLSSLVSRREKIRAQMVARLL--KFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR 797
V VA+ S L R K R + K+NN+ VY++L+TP +PF L+Y +VV SLC+V+ L+Y + +++ C N V+ L++ D KIK + +K+ T ++ ++ ++EL +R
Sbjct: 129 VTVATKSPLYEREPKDSFTEPYRTVVRKWNNKPVYQRLVTPNVPFPLEYCQVVVSLCEVLTLVYGRVVDDVCSSNPCVFQALLRFDEKIKKFFLESISKQLTTIATSVIKDELALLR 245
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A1V9ZQC0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQC0_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.060e-12 Identity = 45/132 (34.09%), Postives = 79/132 (59.85%), Query Frame = 3
Query: 414 LPSDFN**YQ*VSVNVASLSSLVSRREKIRAQMVAR----LLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECYKNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELKTIR 797
LPS Q + + VA+ SSL R+++ + + L K+N + VY +LLTP + F LDY ++V S C+V+ IYAKF+++ C +N +V+ +++ D KIK ++ +K+ +SA + ++EL +R
Sbjct: 302 LPSTL----QNMKLVVATKSSLYERQQEAMKEPLEPHRPVLRKWNQKPVYRRLLTPNISFPLDYNQLVVSACEVLTHIYAKFMDDACSRNQFVFQAVLRFDEKIKKSLLEAISKQLAAISAEVIKDELAALR 429
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Match: A0A4D9CUK2_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUK2_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 3.320e-12 Identity = 39/93 (41.94%), Postives = 60/93 (64.52%), Query Frame = 3
Query: 519 RLLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEECY---KNAYVYGGLVKVDNKIKHHIINVFAKEFTDMSANIARNELK 788
R+ +F+NEVV++ P +PF LDYLEV+ SLC + L+Y + ++A ++ LVK+D K+KHHIIN AKE T ++ +A+ EL+
Sbjct: 189 RIFRFSNEVVFKNFGAPYIPFPLDYLEVLDSLCHTLALLYRQLGHRHAASLERDAALFEVLVKIDAKVKHHIINPIAKELTSLATRLAKQELE 281 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig841.19799.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig841.19799.1 >prot_F-serratus_M_contig841.19799.1 ID=prot_F-serratus_M_contig841.19799.1|Name=mRNA_F-serratus_M_contig841.19799.1|organism=Fucus serratus male|type=polypeptide|length=97bp MVARLLKFNNEVVYEQLLTPQMPFALDYLEVVFSLCDVMCLIYAKFLEEEback to top mRNA from alignment at F-serratus_M_contig841:165719..169195- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig841.19799.1 ID=mRNA_F-serratus_M_contig841.19799.1|Name=mRNA_F-serratus_M_contig841.19799.1|organism=Fucus serratus male|type=mRNA|length=3477bp|location=Sequence derived from alignment at F-serratus_M_contig841:165719..169195- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig841:165719..169195- >mRNA_F-serratus_M_contig841.19799.1 ID=mRNA_F-serratus_M_contig841.19799.1|Name=mRNA_F-serratus_M_contig841.19799.1|organism=Fucus serratus male|type=CDS|length=582bp|location=Sequence derived from alignment at F-serratus_M_contig841:165719..169195- (Fucus serratus male)back to top |