prot_F-serratus_M_contig841.19795.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig841.19795.1
Unique Nameprot_F-serratus_M_contig841.19795.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length542
Homology
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BLAST of mRNA_F-serratus_M_contig841.19795.1 vs. uniprot
Match: D7FV86_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV86_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 2.010e-130
Identity = 255/542 (47.05%), Postives = 314/542 (57.93%), Query Frame = 0 
Query:   34 TEGYPSHALRFLERSDRPSCSSTTTSTTLTSHYPAGYVAPQTPTQARAWTVQPSSTSP--SHNSSLSFLVRSPTSTSATPRVDRAGLHTGMENLGGGFIAAESSRSGVMPRQRLRPDTGDDADCTGSSEDEDDNVCPSIIFSCFPCLACLRPGKRRRNASKGKPFTGNDSSSGSGFGASLNDPLLSNQTDMGDHLPSPADFPKDLKLIEVEVQSARNVPPAAAAGVADSARMFVSLRMTPVQEGVGEQAEDTSLSARTVNPRWGARETFTFFVTDSGNAKAFLQLHLLYRPLRPLQPPSTSRSTTRHPFSRPRRD-SLTDTDTGXXXXXXXXXATAINTTPDAISVGEGFVDILGLFPLHDGMQTS---KGNSRRVAVPMRDPVSKRRTKCLVMLGLRCRRVNETIDTREDRRVLLYEYQMWSQFAGWSSTETRRAGKWSTMDGANVSDSFVKVAPPAGDDSEVVLPWCPFGGWEYSK---------------------------LSQDGWEALVVALNSAVWTEGYASGEGITRRRLWRRV 542
            + G  S+AL FLERSDR + S T  + T T+ +P G+V PQ  T++   T    S +P     S+L+FL R+P        V  AG   G+  L GG +AA + R G +PR     DTG  ++C+ + ED D  +CPS+++SCFPC    R GKRR  A        N     S    SL+ PLL+ Q       PSP +FP D+KLIEVEV+SARN+P      +AD A  +  LR+TPVQEGVGEQ   TSL+ R VNP WG RETFTFFVTD   +KAFL L LLYRPLRP  PP+        P  R   + SL    +G                   +++ EGFVD+LGLF L DG  T    KGN+RRVAVPMR+P  KRRT+C VMLGLRCRRVNETIDTREDR   LYEY+ W++ AGWS+   +RAGKWST+DG+ +SD+F  VAP  G+D+EVVLPWCPFGGWEYS+                           L    WE   VA   AVW EGY  G+   RRRLWRRV
Sbjct:   89 SRGRSSNALSFLERSDRSTDSPTVAAAT-TNPWPVGFVPPQG-TKSNRTTGWSQSYTPYLPRTSALAFLERAPGRARGNNIVGGAGAEDGLGTLSGGMVAAGADRGGFLPRPY---DTG--SECSDAEEDSD--ICPSMLYSCFPCFNWSRRGKRRP-ADLLDGGLANSVKRESRAQLSLSTPLLTEQP------PSPTNFPTDVKLIEVEVESARNLPLGERVNMADLAGTYAILRITPVQEGVGEQVNQTSLATRPVNPSWGGRETFTFFVTDVAGSKAFLSLQLLYRPLRP--PPAPQPLQPPLPLRRGASEASLASVSSGSRHGD--------------VTIAEGFVDLLGLFSLVDGTYTPGTMKGNARRVAVPMREPKGKRRTRCSVMLGLRCRRVNETIDTREDR---LYEYERWTRVAGWSTAGKKRAGKWSTLDGSVLSDNFADVAPGVGEDTEVVLPWCPFGGWEYSRGEETPASAGNTGTSEAGGGRRDEFAPSLGAQEWENFAVAQKGAVWMEGYVQGDQAVRRRLWRRV 595
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig841.19795.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FV86_ECTSI2.010e-13047.05Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035892C2 domain superfamilyGENE3D2.60.40.150coord: 237..321
e-value: 5.0E-5
score: 25.1
NoneNo IPR availableSUPERFAMILY49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 227..317

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig841contigF-serratus_M_contig841:62089..84796 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig841.19795.1mRNA_F-serratus_M_contig841.19795.1Fucus serratus malemRNAF-serratus_M_contig841 62089..84796 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig841.19795.1 ID=prot_F-serratus_M_contig841.19795.1|Name=mRNA_F-serratus_M_contig841.19795.1|organism=Fucus serratus male|type=polypeptide|length=542bp
MSTTILPQDARSSGESSISSSSSNSESNRRRSRTEGYPSHALRFLERSDR
PSCSSTTTSTTLTSHYPAGYVAPQTPTQARAWTVQPSSTSPSHNSSLSFL
VRSPTSTSATPRVDRAGLHTGMENLGGGFIAAESSRSGVMPRQRLRPDTG
DDADCTGSSEDEDDNVCPSIIFSCFPCLACLRPGKRRRNASKGKPFTGND
SSSGSGFGASLNDPLLSNQTDMGDHLPSPADFPKDLKLIEVEVQSARNVP
PAAAAGVADSARMFVSLRMTPVQEGVGEQAEDTSLSARTVNPRWGARETF
TFFVTDSGNAKAFLQLHLLYRPLRPLQPPSTSRSTTRHPFSRPRRDSLTD
TDTGTDTVTEADTATAINTTPDAISVGEGFVDILGLFPLHDGMQTSKGNS
RRVAVPMRDPVSKRRTKCLVMLGLRCRRVNETIDTREDRRVLLYEYQMWS
QFAGWSSTETRRAGKWSTMDGANVSDSFVKVAPPAGDDSEVVLPWCPFGG
WEYSKLSQDGWEALVVALNSAVWTEGYASGEGITRRRLWRRV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf