mRNA_F-serratus_M_contig840.19791.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D8LH99_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH99_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 8.540e-14 Identity = 42/84 (50.00%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDFDILSLADT---CNRPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEYH 246
D+FGTF S +T+F L G DF+ LA + C+ P A A ++LL+ Y I M ++LLNLLIAVLST H KV A AE+E+H
Sbjct: 1234 DAFGTFGDSFVTVFTYALGGPDFEAFQLAGSDCRCDLPEGARNAGIFLLVVYMITMTVVLLNLLIAVLSTTHGKVYANAEKEFH 1317
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D8LH97_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH97_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 1.160e-13 Identity = 41/85 (48.24%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDFDILSLADT---CNRPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEYHL 249
D+FGTF SLLT+F + L G +FD+ A + CN P A A + +++ Y I M+++LLNLLIAVLST H +V AE+E+HL
Sbjct: 1100 DAFGTFGDSLLTVFSSALGGPEFDLFDDAGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHL 1184
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D8LHA0_ECTSI (Transient Receptor Potential Channel. Partial sequence n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHA0_ECTSI) HSP 1 Score: 74.3 bits (181), Expect = 1.170e-13 Identity = 40/85 (47.06%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDFDILSLADT---CNRPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEYHL 249
D+FGTF S +T+F A L G DF++ A + C P A A ++L++ Y +IMA++LLNLLIAVLST H+KV ++E+HL
Sbjct: 1299 DAFGTFGRSFVTVFSAALGGPDFELYEAAGSECRCKLPDGAQEAGIFLMVVYMVIMAVVLLNLLIAVLSTAHSKVYDNGDKEFHL 1383
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: A0A6H5JTT3_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTT3_9PHAE) HSP 1 Score: 67.8 bits (164), Expect = 2.310e-11 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDFDILSLADT---CNRPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEYHL 249
D+FGTF S +T+F + L G + D+ + CN P A A + +++ Y I M+++LLNLLIAVLST H +V AE+E+HL
Sbjct: 468 DAFGTFGDSFVTVFSSALGGPEIDLFDDVGSDCRCNLPRGARSAGISMMVVYTITMSVVLLNLLIAVLSTAHDEVYVNAEKEFHL 552
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D7FMR2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMR2_ECTSI) HSP 1 Score: 65.1 bits (157), Expect = 2.080e-10 Identity = 40/85 (47.06%), Postives = 52/85 (61.18%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDFDILSLAD---TCNRPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEYHL 249
+S+ T SLL +F +ML +FD AD TC P+W + A + LL Y ++ AIL+LNLLIAVLSTVH V A E+HL
Sbjct: 1528 ESYRTLRESLLDMFRSMLGDANFDRFE-ADRNLTCTGPSWEFDAGITLLTIYIVLQAILMLNLLIAVLSTVHDTVSENAITEFHL 1611
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D7FNX2_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNX2_ECTSI) HSP 1 Score: 64.3 bits (155), Expect = 3.750e-10 Identity = 36/86 (41.86%), Postives = 57/86 (66.28%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDF-DILSLADTCN---RPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEYHL 249
+SFG+F ++ L++FEA L F F D + C P A A +LL+AY +++A+++LNLL+AVL+T H +V+A E+E+HL
Sbjct: 45 ESFGSFGTAFLSVFEAPLGEFSFEDFHDVGTQCPDNPAPGRASDAGTFLLVAYLVVLAVVMLNLLVAVLTTAHGEVNANGEKEFHL 130
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: A0A6H5JB40_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB40_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 1.850e-9 Identity = 37/86 (43.02%), Postives = 56/86 (65.12%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDF-DILSLADTCN---RPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEYHL 249
+S+G+F ++ LT+F+A L F F D + C P A A +LL+AY +++A+++LNLLIAVLST H +V A E+E+HL
Sbjct: 1218 ESYGSFGTAFLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLVVLAVVMLNLLIAVLSTAHGEVYANGEKEFHL 1303
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D7FX79_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX79_ECTSI) HSP 1 Score: 52.4 bits (124), Expect = 6.210e-6 Identity = 33/75 (44.00%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 4 DSFGTFWSSLLTLFEAMLSGFDF-DILSLADTCN---RPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAK 216
+S+G+F ++LLT+F+A L F F D + C P A A +LL+AY I++A+++LNLLIAVLST H +
Sbjct: 1216 ESYGSFGTALLTVFKAPLGEFKFEDFDDVGGQCPYNPSPGRASDAGTFLLVAYLIVLAVVMLNLLIAVLSTAHGE 1290
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D8LM43_ECTSI (Ankyrin repeat Transient receptor potential channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM43_ECTSI) HSP 1 Score: 50.4 bits (119), Expect = 2.970e-5 Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 1
Query: 1 VDSFGTFWSSLLTLFEAMLSGFDFDILSLADTCNRPTWAYGASVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEE 240
+ + T++SS+LTLF +ML F F++ A A L++ + +M I LLNLLIA+L+T HA+++ A++E
Sbjct: 843 IAEYDTYYSSILTLFSSMLGNFSFEVFKGAPMAE-------AGEVLMVFFLCVMNITLLNLLIAILATAHARLEGNADKE 915
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Match: D7FLB1_ECTSI (Ankyrin Repeat Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLB1_ECTSI) HSP 1 Score: 50.4 bits (119), Expect = 2.970e-5 Identity = 35/82 (42.68%), Postives = 52/82 (63.41%), Query Frame = 1
Query: 1 VDSFGTFWSSLLTLFEAMLSGFDFDILSLADTCNRPTWAYGA-SVWLLIAYEIIMAILLLNLLIAVLSTVHAKVDAKAEEEY 243
VD+FG + LTLF+AML DF + P Y + + L + Y +++A++LLNLLIAVLST H+KV+ KA++E+
Sbjct: 962 VDTFG---GTCLTLFKAMLGEVDF-------FGSFPGNQYDSVATALFVIYLVVIAVMLLNLLIAVLSTSHSKVEGKADQEF 1033 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig840.19791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig840.19791.1 >prot_F-serratus_M_contig840.19791.1 ID=prot_F-serratus_M_contig840.19791.1|Name=mRNA_F-serratus_M_contig840.19791.1|organism=Fucus serratus male|type=polypeptide|length=83bp VDSFGTFWSSLLTLFEAMLSGFDFDILSLADTCNRPTWAYGASVWLLIAYback to top mRNA from alignment at F-serratus_M_contig840:34475..34942- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig840.19791.1 ID=mRNA_F-serratus_M_contig840.19791.1|Name=mRNA_F-serratus_M_contig840.19791.1|organism=Fucus serratus male|type=mRNA|length=468bp|location=Sequence derived from alignment at F-serratus_M_contig840:34475..34942- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig840:34475..34942- >mRNA_F-serratus_M_contig840.19791.1 ID=mRNA_F-serratus_M_contig840.19791.1|Name=mRNA_F-serratus_M_contig840.19791.1|organism=Fucus serratus male|type=CDS|length=498bp|location=Sequence derived from alignment at F-serratus_M_contig840:34475..34942- (Fucus serratus male)back to top |