mRNA_F-serratus_M_contig84.19779.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig84.19779.1
Unique NamemRNA_F-serratus_M_contig84.19779.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A6H5JER8_9PHAE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JER8_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 2.250e-53
Identity = 98/123 (79.67%), Postives = 109/123 (88.62%), Query Frame = 3 
Query: 1338 VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVARQTV 1706
            V DP AMGEVQQRE AVRG+LHRDP  ALR++LEDPP+ CKD AVK KS ECVLMVLTGVRED+I+ CLAGLSLDE D+LVKYVYKGLG+PRNNGPLFKWHAK L KGG GC+MR+LV+RQTV
Sbjct:  480 VSDPAAMGEVQQRETAVRGMLHRDPGGALRRSLEDPPVFCKDEAVKAKSMECVLMVLTGVREDQIENCLAGLSLDEMDVLVKYVYKGLGMPRNNGPLFKWHAKVLEKGGPGCVMRTLVSRQTV 602
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BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: D8LCU1_ECTSI (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU1_ECTSI)

HSP 1 Score: 181 bits (459), Expect = 9.870e-47
Identity = 87/105 (82.86%), Postives = 95/105 (90.48%), Query Frame = 3 
Query: 1338 VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKAL 1652
            V DP AMGEVQQRE AVRG+LHRDP  ALRK+LEDPPI CKD AVK KS+ECVLMVLTGVRED+I+ CLAGLSLDE D+LVKYVYKGLG+PRNNGPLFKWHAK+L
Sbjct:  253 VSDPAAMGEVQQRETAVRGMLHRDPGGALRKSLEDPPIFCKDEAVKAKSTECVLMVLTGVREDQIENCLAGLSLDEIDVLVKYVYKGLGMPRNNGPLFKWHAKSL 357
[Close]
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A835ZBW9_9STRA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBW9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 4.990e-30
Identity = 59/117 (50.43%), Postives = 84/117 (71.79%), Query Frame = 3 
Query: 1356 MGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVARQTV 1706
            M  V +RE +VR LLH+D  AALRKALE+PP+  +D AVKDK+++ VL VL   ++ ++   +A LS +E+D L+KYVY+GL  P  NG LF+WHA  L +GG GC++R++  R+TV
Sbjct:    1 MAAVAERERSVRSLLHKDLTAALRKALENPPVGTRDKAVKDKNTDVVLDVLGAAKDAQLAPAVAALSAEESDALMKYVYRGLAKPAPNGALFRWHAAVLERGGVGCVVRAVADRRTV 117
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BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A7S0JJE6_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0JJE6_9EUKA)

HSP 1 Score: 94.0 bits (232), Expect = 8.800e-19
Identity = 49/118 (41.53%), Postives = 72/118 (61.02%), Query Frame = 3 
Query: 1338 VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNN---GPLFKWHAKALAKGGTGCIMR 1682
            V D V +  ++ RE+++  LL  DP  AL  +L DPP Q K  AVKD S + V+  L G++E  I+  +A LSLD+ D+L+KY+Y GLG P+ +    PL KWH+  + + G   I+R
Sbjct:   17 VDDGVLLASIKTRESSINPLLRTDPVKALHISLTDPPYQTKTQAVKDASCDVVVKALLGIKEADIEGVVASLSLDQCDVLMKYLYCGLGQPKRDKQYAPLLKWHSFVVKRAGQASIVR 134
[Close]
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A7S0Q3G7_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q3G7_9EUKA)

HSP 1 Score: 86.7 bits (213), Expect = 3.260e-16
Identity = 45/124 (36.29%), Postives = 69/124 (55.65%), Query Frame = 3 
Query: 1344 DPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNG---PLFKWHAKALAKGGTGCIMRSLVARQTV 1706
            D   +  ++ R++++  LL  DP  AL  +L DPP Q K  AVKD S + V   L  +++  ++  +A LSLD+ D+L+KY+Y GLG  + +    PL KWH   L + G   I+R +   Q V
Sbjct:   20 DNAMLAAIKARDSSIAPLLRTDPVRALHLSLADPPYQTKTQAVKDASCDVVCKALLAIKDADVEPAVAALSLDQCDVLMKYIYSGLGQTKKDKQYQPLLKWHGLVLKRAGQASIVRVISEVQRV 143
[Close]
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: H3GBG7_PHYRM (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBG7_PHYRM)

HSP 1 Score: 88.2 bits (217), Expect = 3.410e-16
Identity = 46/115 (40.00%), Postives = 68/115 (59.13%), Query Frame = 3 
Query: 1365 VQQRENAVRGLL-HRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVARQTV 1706
            VQ R   V+GLL  R    A+R ALEDPP+Q K+ AVKD++++ V+  L    + ++   +  LS  + D L+KYV + LG+   +  + +WH K  AK G GCIMR+   R+ V
Sbjct:   80 VQARATQVQGLLAQRKNEEAVRAALEDPPLQSKNDAVKDENAKAVMAALLACNKGEMQRAIDSLSSVQEDSLMKYVMRFLGVASQSAAMLEWHQKLSAKAGAGCIMRAFTERKQV 194
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BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: L1JCW3_GUITC (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Guillardia theta TaxID=55529 RepID=L1JCW3_GUITC)

HSP 1 Score: 85.9 bits (211), Expect = 3.490e-16
Identity = 49/111 (44.14%), Postives = 64/111 (57.66%), Query Frame = 3 
Query: 1365 VQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLVAR 1697
            +Q RE  V  LL R P+AAL+ AL DPP   K P V+  S + V+  + GV+E +I   +  LS +E D+L+KY+Y+GL        L KWHA    K G GCIMR L  R
Sbjct:   12 IQAREKQVLQLLSR-PSAALKAALTDPPYSAKSPDVRKSSMKVVVKAIQGVQEKEIAGVIDELSGEEQDVLMKYLYRGLEEVEACNSLLKWHAILTEKAGVGCIMRVLADR 121
[Close]
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A5A9P7X4_9TELE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Triplophysa tibetana TaxID=1572043 RepID=A0A5A9P7X4_9TELE)

HSP 1 Score: 86.7 bits (213), Expect = 4.150e-16
Identity = 46/112 (41.07%), Postives = 65/112 (58.04%), Query Frame = 3 
Query: 1377 ENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGP--LFKWHAKALAKGGTGCIMRSLVARQTV 1706
            +N +R     D  AAL   L +PPI  K+PA+K+++   VL VLT  R   I+  +  L  +  DLL+KY+Y+G   P +N    L +WH KA A GG G I+R + AR+TV
Sbjct:   42 DNLIRQYPLLDMMAALHVGLRNPPINSKNPAIKERAQTLVLRVLTSFRSSDIESAVKSLDKNRLDLLMKYIYRGFEKPTDNSSAILLQWHEKAFAVGGLGSIVRVMTARKTV 153
[Close]
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A8C9TFI3_SCLFO (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9TFI3_SCLFO)

HSP 1 Score: 86.3 bits (212), Expect = 5.220e-16
Identity = 45/102 (44.12%), Postives = 62/102 (60.78%), Query Frame = 3 
Query: 1407 DPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGP--LFKWHAKALAKGGTGCIMRSLVARQTV 1706
            D  AA   AL +PPI  K+PA+K+++   VL VLT  R  +I++ +  L  +  DLL+KY+Y+G   P  N    L +WH KA A GG G I+R L AR+TV
Sbjct:   49 DMMAAFHVALRNPPINTKNPAIKERAQAIVLKVLTSFRSSEIEQAVRSLDRNGVDLLMKYIYRGFEKPSENSSAILLQWHEKAFAVGGLGSIVRVLTARKTV 150
[Close]
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Match: A0A0H5R263_9EUKA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5R263_9EUKA)

HSP 1 Score: 85.1 bits (209), Expect = 7.050e-16
Identity = 46/128 (35.94%), Postives = 70/128 (54.69%), Query Frame = 3 
Query: 1326 ARSDVLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSSECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKWHAKALAKGGTGCIMRSLV-ARQTV 1706
            A S + D   + +++ +    R +L    A AL  A+  PP    D  VKD + + VL  +  +R++ +D  +  LSLD  DLL+KYVY+G  I  +   + KWHAK + + G G IMR L  ++QTV
Sbjct:    3 ATSGIYD---ISQMEMKVEETRSILKVGAAKALLHAMSAPPFSSPDQVVKDLARDAVLECILAIRDEDVDNVIGSLSLDNQDLLLKYVYRGFAIGDSCNAILKWHAKIVERNGIGSIMRVLTQSKQTV 127
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig84.19779.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JER8_9PHAE2.250e-5379.67Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
D8LCU1_ECTSI9.870e-4782.86Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A835ZBW9_9STRA4.990e-3050.43Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S0JJE6_9EUKA8.800e-1941.53Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A7S0Q3G7_9EUKA3.260e-1636.29Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
H3GBG7_PHYRM3.410e-1640.00Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
L1JCW3_GUITC3.490e-1644.14Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]
A0A5A9P7X4_9TELE4.150e-1641.07Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A8C9TFI3_SCLFO5.220e-1644.12Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0H5R263_9EUKA7.050e-1635.94Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig84contigF-serratus_M_contig84:359156..364805 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score181.8
Seed ortholog evalue8.3e-43
Seed eggNOG ortholog2880.D8LCU1
Preferred nameARPC5
KEGG koko:K05754,ko:K14016
KEGG Pathwayko04141,ko04144,ko04666,ko04810,ko05100,ko05130,ko05131,ko05132,map04141,map04144,map04666,map04810,map05100,map05130,map05131,map05132
KEGG ModuleM00400,M00403
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000147,GO:0000902,GO:0000904,GO:0001667,GO:0001775,GO:0002009,GO:0002252,GO:0002253,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002444,GO:0002446,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003779,GO:0005198,GO:0005200,GO:0005488,GO:0005515,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005826,GO:0005829,GO:0005856,GO:0005885,GO:0005937,GO:0005938,GO:0006810,GO:0006887,GO:0006897,GO:0006909,GO:0006928,GO:0006955,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007154,GO:0007163,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008064,GO:0008092,GO:0008150,GO:0008154,GO:0009653,GO:0009790,GO:0009825,GO:0009888,GO:0009987,GO:0010026,GO:0010090,GO:0010631,GO:0010638,GO:0012505,GO:0012506,GO:0014812,GO:0014909,GO:0015629,GO:0016020,GO:0016043,GO:0016049,GO:0016192,GO:0016331,GO:0016477,GO:0019867,GO:0019898,GO:0021761,GO:0021769,GO:0022607,GO:0023052,GO:0030011,GO:0030027,GO:0030029,GO:0030030,GO:0030036,GO:0030041,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030424,GO:0030426,GO:0030427,GO:0030479,GO:0030659,GO:0030666,GO:0030670,GO:0030832,GO:0030833,GO:0030838,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030900,GO:0031090,GO:0031097,GO:0031143,GO:0031252,GO:0031312,GO:0031315,GO:0031334,GO:0031410,GO:0031966,GO:0031967,GO:0031968,GO:0031974,GO:0031975,GO:0031982,GO:0031983,GO:0032153,GO:0032155,GO:0032271,GO:0032273,GO:0032501,GO:0032502,GO:0032535,GO:0032940,GO:0032956,GO:0032970,GO:0032989,GO:0032991,GO:0033043,GO:0033267,GO:0034314,GO:0034622,GO:0034774,GO:0036230,GO:0038093,GO:0038094,GO:0038096,GO:0040007,GO:0040011,GO:0042119,GO:0042995,GO:0043005,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043299,GO:0043312,GO:0043332,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044396,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044455,GO:0044463,GO:0044464,GO:0044877,GO:0045010,GO:0045055,GO:0045321,GO:0045335,GO:0046903,GO:0048013,GO:0048308,GO:0048311,GO:0048468,GO:0048513,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048598,GO:0048729,GO:0048731,GO:0048856,GO:0048869,GO:0048870,GO:0050776,GO:0050778,GO:0050789,GO:0050794,GO:0050896,GO:0051015,GO:0051128,GO:0051130,GO:0051179,GO:0051234,GO:0051258,GO:0051286,GO:0051493,GO:0051495,GO:0051639,GO:0051640,GO:0051641,GO:0051646,GO:0051674,GO:0051716,GO:0060205,GO:0060322,GO:0060429,GO:0061024,GO:0061645,GO:0061842,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070938,GO:0071840,GO:0071944,GO:0090066,GO:0090130,GO:0090132,GO:0090558,GO:0090626,GO:0097159,GO:0097435,GO:0097458,GO:0097581,GO:0097708,GO:0098588,GO:0098657,GO:0098805,GO:0098858,GO:0099503,GO:0099568,GO:0099738,GO:0101002,GO:0110053,GO:0120025,GO:0120036,GO:0120038,GO:0150034,GO:1901363,GO:1902903,GO:1902905,GO:1904813
EggNOG free text desc.Arp2/3 complex-mediated actin nucleation
EggNOG OGsKOG3380@1,KOG3380@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko04131,ko04812
Exons5
Model size2701
Cds size1572
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932479.6484907-UTR-F-serratus_M_contig84:359155..3601471622932479.6484907-UTR-F-serratus_M_contig84:359155..360147Fucus serratus maleUTRF-serratus_M_contig84 359156..360147 -
1690964329.058802-UTR-F-serratus_M_contig84:359155..3601471690964329.058802-UTR-F-serratus_M_contig84:359155..360147Fucus serratus maleUTRF-serratus_M_contig84 359156..360147 -
1622932479.7365494-UTR-F-serratus_M_contig84:364363..3644381622932479.7365494-UTR-F-serratus_M_contig84:364363..364438Fucus serratus maleUTRF-serratus_M_contig84 364364..364438 -
1690964329.1102967-UTR-F-serratus_M_contig84:364363..3644381690964329.1102967-UTR-F-serratus_M_contig84:364363..364438Fucus serratus maleUTRF-serratus_M_contig84 364364..364438 -
1622932479.757553-UTR-F-serratus_M_contig84:364743..3648051622932479.757553-UTR-F-serratus_M_contig84:364743..364805Fucus serratus maleUTRF-serratus_M_contig84 364744..364805 -
1690964329.1252115-UTR-F-serratus_M_contig84:364743..3648051690964329.1252115-UTR-F-serratus_M_contig84:364743..364805Fucus serratus maleUTRF-serratus_M_contig84 364744..364805 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932479.6703732-CDS-F-serratus_M_contig84:360147..3602101622932479.6703732-CDS-F-serratus_M_contig84:360147..360210Fucus serratus maleCDSF-serratus_M_contig84 360148..360210 -
1690964329.07129-CDS-F-serratus_M_contig84:360147..3602101690964329.07129-CDS-F-serratus_M_contig84:360147..360210Fucus serratus maleCDSF-serratus_M_contig84 360148..360210 -
1622932479.6858144-CDS-F-serratus_M_contig84:362004..3621751622932479.6858144-CDS-F-serratus_M_contig84:362004..362175Fucus serratus maleCDSF-serratus_M_contig84 362005..362175 -
1690964329.0814826-CDS-F-serratus_M_contig84:362004..3621751690964329.0814826-CDS-F-serratus_M_contig84:362004..362175Fucus serratus maleCDSF-serratus_M_contig84 362005..362175 -
1622932479.7028081-CDS-F-serratus_M_contig84:362679..3627751622932479.7028081-CDS-F-serratus_M_contig84:362679..362775Fucus serratus maleCDSF-serratus_M_contig84 362680..362775 -
1690964329.091058-CDS-F-serratus_M_contig84:362679..3627751690964329.091058-CDS-F-serratus_M_contig84:362679..362775Fucus serratus maleCDSF-serratus_M_contig84 362680..362775 -
1622932479.718902-CDS-F-serratus_M_contig84:363121..3643631622932479.718902-CDS-F-serratus_M_contig84:363121..364363Fucus serratus maleCDSF-serratus_M_contig84 363122..364363 -
1690964329.1007383-CDS-F-serratus_M_contig84:363121..3643631690964329.1007383-CDS-F-serratus_M_contig84:363121..364363Fucus serratus maleCDSF-serratus_M_contig84 363122..364363 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig84.19779.1prot_F-serratus_M_contig84.19779.1Fucus serratus malepolypeptideF-serratus_M_contig84 360148..364363 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig84.19779.1

>prot_F-serratus_M_contig84.19779.1 ID=prot_F-serratus_M_contig84.19779.1|Name=mRNA_F-serratus_M_contig84.19779.1|organism=Fucus serratus male|type=polypeptide|length=524bp
MSGPPPPPPKRGPPPIPSSAPPPTPPPPVPSRGPPPLPRGAPPPLPGGAP
PPIPSYGPPSIPSAPYRSPPPIPGGAPPPIPGGAPPPLPGVAPPPAANYG
RPELPRSSPLNHSLLNAPPPPPPPATQGYQPPLPPPATQGYQPPPPPPAT
QGYQPPPPPPASQIYQPPPPSVPVPPASQGYLPPTPAPPPYQYQPPPAPS
GGYQPPPPPPTASSTSRYAPPPPVAQRQPPPPTPMPPVSQGYHPPSQGYK
PPPPSIPSYTPPAHTPSPAPTVALRRVNQTHQPPPPAPSSETVPAYMRPG
LRSTFVAAPEPAPVSVPPPPPTSQPTQASYAAAPREYGGNSIGRGGYTVP
VSAQTPAAAQYPTPTPAQEYRAAVPSASQGYSPPPPPQPHPPTSFGARSD
VLDPVAMGEVQQRENAVRGLLHRDPAAALRKALEDPPIQCKDPAVKDKSS
ECVLMVLTGVREDKIDECLAGLSLDENDLLVKYVYKGLGIPRNNGPLFKW
HAKALAKGGTGCIMRSLVARQTV*
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mRNA from alignment at F-serratus_M_contig84:359156..364805-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig84.19779.1 ID=mRNA_F-serratus_M_contig84.19779.1|Name=mRNA_F-serratus_M_contig84.19779.1|organism=Fucus serratus male|type=mRNA|length=5650bp|location=Sequence derived from alignment at F-serratus_M_contig84:359156..364805- (Fucus serratus male)
GGTCGAACGACGTAGTTCGTGAGGCACACACTCCCTGTCTGCCGAAAAAA
AAAACAATACTGGTGAGAGATGGCATATCCCTGCTTGAGCGTCTACGCTG
CCCTGCGTCGTGATAGCGGCATGAGAACCGATGATTCGATGCATAGAGTT
ATGGAAATCACGAAGCCTTCCAGAGAGCTTACTGACAAAGCCTACTTATA
GCACATGTATATTAGTAGTTTATAATAGGGGAAAATGTCTTCCCAGGAGG
AGTAACTCGTCAAGAACAACGCTTCCACAGTTCAGATCACACTCCGTCGT
GGAATGCGAACTCACTCGACCCACTCTCTTCTGTCCATACCGTATAACCT
CATTGCCGTGCCCTTAGATTTTTCAGGCATTGTGAACGTACTACTGCACT
GGGTCCGAAGGTTCTGTGCAGGCTACAGTACTGTCGTCACGTATGTCAGG
CCCGCCTCCTCCACCGCCAAAGCGAGGGCCGCCGCCGATTCCGAGCTCGG
CACCGCCGCCCACGCCCCCGCCTCCCGTGCCTTCAAGAGGTCCGCCGCCG
CTACCAAGAGGGGCACCTCCGCCCCTTCCGGGGGGAGCACCACCACCGAT
ACCATCTTACGGCCCGCCCTCAATTCCCTCAGCCCCATACAGATCCCCGC
CCCCGATTCCGGGAGGTGCGCCGCCCCCGATTCCGGGTGGCGCGCCGCCG
CCACTTCCAGGGGTTGCACCTCCGCCTGCGGCAAATTATGGACGACCTGA
GCTACCCCGCTCCTCGCCGCTTAATCATTCGCTGCTGAATGCTCCCCCGC
CTCCGCCTCCTCCGGCAACTCAGGGGTATCAACCACCCCTGCCTCCTCCG
GCAACTCAGGGGTACCAACCACCCCCGCCTCCCCCGGCAACTCAGGGGTA
CCAGCCACCCCCCCCGCCTCCAGCAAGCCAAATTTACCAACCCCCGCCGC
CGTCTGTGCCTGTGCCACCGGCGTCACAAGGTTATCTACCTCCGACTCCT
GCGCCTCCGCCGTACCAATATCAGCCACCGCCTGCGCCAAGTGGAGGTTA
TCAGCCGCCGCCCCCTCCGCCGACTGCTTCTAGTACCTCCCGCTACGCCC
CCCCTCCACCAGTAGCCCAGAGGCAGCCGCCGCCGCCTACGCCTATGCCA
CCGGTGAGCCAAGGCTACCATCCACCATCGCAGGGATACAAACCGCCTCC
GCCGTCTATCCCTTCCTACACGCCTCCCGCGCACACGCCATCTCCTGCTC
CGACCGTGGCGCTCCGGCGCGTGAACCAAACCCACCAGCCCCCGCCGCCG
GCCCCTAGCTCCGAGACCGTGCCAGCGTACATGCGCCCCGGGCTTCGCTC
TACGTTCGTTGCGGCACCCGAGCCAGCACCGGTATCGGTGCCGCCGCCGC
CCCCAACCAGCCAACCCACGCAAGCTTCATACGCCGCCGCGCCGCGAGAG
TATGGGGGCAACAGCATCGGCCGCGGCGGGTACACGGTGCCCGTATCGGC
GCAAACGCCAGCAGCGGCCCAGTACCCCACGCCGACCCCCGCGCAGGAAT
ACAGGGCCGCGGTACCATCAGCCTCTCAGGGATATTCTCCGCCGCCGCCC
CCTCAGCCTCACCCGCCGACAAGCTTTGGAGCGAGGTCGGACGTCTTGGA
CCCTGTGGCCATGGGAGAGGTACAGCAACGAGAGGTGAGTTTGTTAGTCG
ATTCGTCGCGTCGTAGGCGTTCGAGGTGGGGACTGCCGATCGCTCCCCGC
TCCTTCTGTTTTTTCTTGTTTGTTTGTTTTTTGCGGACTACGTTGATGCC
GGGGCAGCTCCCCTCCCGTCGCCGCATGGACTTCAAACATATGGGGTGCA
TGCGTGGCGTTTTGATTGGTCCTTGTATCGAGCGCTCGATCGTAAACTAT
TAAAAGTCAGTTTGGGCGCGCTTCGGCTACCCTCGATCGTAAAAACGATT
CGGTACAGTATCCTATACTGCGCAATCACGCATGAATTTTGGTGACGCCT
GCCCGTACTTCTTCGCAATCCGCGACGCAGAATGCAGTCCGTGGACTGCT
CCACAGAGATCCTGCGGCGGCGCTGCGTAAGGCGCTGGAGGACCCGCCCA
TTCAATGCAAAGATCCTGCCGTCAAGGTAGGCAGCGATAAAATTGCATTT
GAGATACAACAGCCAATGTTTTCACCTAAACCTTAAACCTTTTGATTGCT
CACGAGGTTTAGCTGCGTTCAGATTTTGTTTTAACTCCCTTGCTTTGACT
TTGAGGCACGGAGAGCCTCACCAGAGCTACTCGGAAGTCGGATGGGCATC
CGTCGTCATTCACAATTTCTGCATCGGCAGGATCGCTCAGGGCATTTTCG
TCGATTGTCGGAGGCATTTTTGTTAATATATTTTCTGATTGAGCGCGAAC
TCATACCGACGAATTGTTACGATTGTCTGGTCGATCCGACGTGCTGATCC
ATATACCGTTATTCACTATCCTCTAATTTACATTCGTGGGCGAGATATAG
GCAGTGTCAAAACTATTGGGTATTGATCATACGCGGTCGCCCTGAGAGTC
AGTCCTGCGTGTCTTGGTGAAATTAGTGTAAATATGTACCGCCACCGTCT
GAAAATTTCCTTGAACGCTCTTGCGGCCAGGACAAGAGCTCGGAGTGCGT
TTTGATGGTGCTGACGGGAGTGCGGGAGGATAAGATCGACGAATGTCTGG
CGGGCTTGTCCTTGGACGAAAATGATCTGCTCGTCAAGTACGTCTACAAA
GGACTCGGCATCCCTCGCAACAACGGCCCGCTCTTCAAGTGGCATGCCAA
GGTGCGTCCGTGACGCTGGAATAGCGCCATGTGGTGTGCGCGGCGTGTGC
ATTTTTTTTTCCCCGGACATATGTTGGAGAGAGTCGATTTTGTGGTTCAA
GTTAGCAAATACCGGTAGTACCAACTCCGAAAACCCGGTCTTTTGTGTTG
AGGTTGAGCGTCATGTATGTATGTATGGTCACTCGTATAGCAAGAGTATG
GATCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGTCAGCGGAACAGGGA
AAATGAAATATTCCCTGTCCGCGTTCGCGTCTGAGAATTCCGTCTCGCGA
GACGGGTTCGGCAGTCCCGTCCCGCGTTAGCCTGCTCATCTCCATACACA
AGGCTGAATCTGGTACTTACTTACGAAATCCCTCCCGAGTTCCGCGGCGG
CGTCCATTCATCTATTTAAAACCGCCGTACGTCATCGGGCAAGTCCCGAG
TTTATCGGGTCACGCAATTGAGTACCGATGACGTTCACTGCCGCGAGTTC
GCCGGCGCAGGGCCAGTAAACCTCAAGGTAGTTCCGAACGAGTGCTGCCT
TGGCAGGTTACCATAGACCAATCAATGCGCGCCTCTCTTGCCCACACCCA
CTATACTATTGGTATGGAGTGGGCATGCTGAAAGTACCGGCGATATAGGG
GTACTGTTAAGTTAGGTGTGATGCATGTACGCGTGAGTGCGTTCGAGAAA
TATTCCACGTAACCGCGCAATCCCTCCCCCTGTCGTGCGAATAATTTAGT
AATAGTATGCTGCTCGTATTGGTCCTCCGAAGGGGGTACCGATGACCGAT
GATTGGTGCCGTCGGTCGCGAAAACCTCTCGGTAAAACGCGACAAGGGGG
TGTCACTCACTCTCTCTACAGGTGTCACTCTCTTGACTCTAGCTTCCCGG
TTTCTAGTCTTGCGCTTCCCCCCTCACCCTACCTAAGTCATCTTGACGGC
GCAGTCGGTATCTACGGTATCGCTTACACTATCTCGTCTATGCGTTTCTG
TTTCGGCCAACCTCTTTGGCGAGTTCTCGCGCGTCATCCCCCCCCCTACA
CGTCTCAGATTTTTTGTATCCCTCTAGTGATACGACGTGCTCTCTCCGGC
ATCAGATATTGCGATTGTAAATAGTTGTTGATCGTACGTGTACGTGTAAC
CCTACCCCCCTCTCACTTATTTCGCATCCTCTTTTGAGTCTTTTACTTCC
ACCTCTTTGTATCGTGAATGAGTCCGAGAACCTAACAAATTAGATCGAGG
TGGTGTAGAAAACGCGATAGAAACGAGGTGAAGCCTACGGGCAATCGGCA
GCTACAGTCGCACTACCCGGTGCTCGAGCGAGCACGACGTGCGTCGTGAA
GAGGATCCAGCCCGCCACACGCCACATAATTATAGGCGACGGGGTGGATG
ATGGGAAAAAGAGTTGGGTAGTCGGAAGACGTGTTTGTGTGTCTGTTGGT
GCGTCTGCAAGGTCGCGAAGCTCTATCATATCATACCTGGTATTAACAAA
TGTATTTGGTACTTTTCATCTGGCGTCGACTTTTGGAGATCATGCCCCAG
ATATGCTCGTCGCTACATTTCGCCTGCTGAAATCACGCACCCGTGCACTC
TGGTCATGTCATGTCATGGGTACTTTGATCCGCCGAGAAAGTGCGTTTAT
CGAGAAATTTGCCGTCCCCTACAGCTCTGTTAAGGGTTCAACTTTGAAGA
TGACTTCCCGATCTTATACGAGTACCCCCGCCCTTTGTTTGCCATTGCTT
TTTGCTCTCTTCATTTCGTGCAACGCATCTCCCCTTGGCGGGCAGGCGCT
GGCGAAGGGCGGCACGGGATGCATCATGCGCTCCCTCGTCGCCCGGCAGA
CGGTCTGAGTGCATTTCTTCTACGATGCCTGCCGCAGACGCCGGATATCT
CTTGTGCTCCGCATGTTACCCACCGGCAAATTGCTCTGGTTTTGTCAAGA
AATCGTCGGGCGGAGTCTGCAGGGGGGGAGGGGGGCAACTCCAACATAAT
CAAAAGGTCCATGACGTTGAAGTGAATAACTCAGACTGTATACTTACTTC
ACATACGGCTGTCTCGGGTGGGTGTTTCTAAGGTGCGCCCGTTGCCTTTC
GGTCTTTTGCCAACCAAAATCTGTGTTCGGCTATTCGGTGACCTTACTTT
TCGTTGAATCATGGACGGCTTTCTGCCGGCTTTTCTACCCCGTCAGGCGT
TTTTTCTCTATTTCTTGTCATCCCCCGTTAATCGTCGTGCTGCTTGTTTT
CTGGGTGGGCGGGGTTTATCGTTTGGTTTTTCTGAAGGGTACGAGACAGA
CGGAGGATTCGGGTCGACGGAGGGATTGCTTGGTTTTATGTGGTAGTACT
TTTTCTTCCTTTAGATAGTTTCATTGACTCGGCTTTCTCGGTCCGGAAGC
AGCGATCGTGTTGTGTGCGTTGGAGCCTTAAAATGACAGTTTCGACTCGG
TTTCGCTGCCGCCCGCAGCTAAGTCAGTTGATTTGGTCAAGATATGGCTT
GGGCTGCTCTGATTTGCAGCGTTAGAATCTGATGTCTACTGTGTGCCGTT
GTTTTTCTCGTATGCCGCTGACGGAACGTACAAGTTGGTTTGAATGGTGA
ATGGAGACAGACAGATCCAACGAATGAAAAGGGTGTTTGCAGAGACGAAA
TTTCTTGGCCGATTTCCGTGGCCGAAGAGTTCCCCAGATGGAAACCCTTC
TCATCTCCGCCGATTTTTTCACTGAAAACGACCATTCCCCGTAACTAAAA
TTTCTGGGGGGATGAGGAAAATTGGGAGAGCAAGGACTGTCTGTACATGA
AAAACATCAACGCTGGAGAACCCCCGCCCGCAACCCAGGCGTTTAACGGT
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Coding sequence (CDS) from alignment at F-serratus_M_contig84:359156..364805-

>mRNA_F-serratus_M_contig84.19779.1 ID=mRNA_F-serratus_M_contig84.19779.1|Name=mRNA_F-serratus_M_contig84.19779.1|organism=Fucus serratus male|type=CDS|length=3144bp|location=Sequence derived from alignment at F-serratus_M_contig84:359156..364805- (Fucus serratus male)
ATGTCAGGCCCGCCTCCTCCACCGCCAAAGCGAGGGCCGCCGCCGATTCC
GAGCTCGGCACCGCCGCCCACGCCCCCGCCTCCCGTGCCTTCAAGAGGTC
CGCCGCCGCTACCAAGAGGGGCACCTCCGCCCCTTCCGGGGGGAGCACCA
CCACCGATACCATCTTACGGCCCGCCCTCAATTCCCTCAGCCCCATACAG
ATCCCCGCCCCCGATTCCGGGAGGTGCGCCGCCCCCGATTCCGGGTGGCG
CGCCGCCGCCACTTCCAGGGGTTGCACCTCCGCCTGCGGCAAATTATGGA
CGACCTGAGCTACCCCGCTCCTCGCCGCTTAATCATTCGCTGCTGAATGC
TCCCCCGCCTCCGCCTCCTCCGGCAACTCAGGGGTATCAACCACCCCTGC
CTCCTCCGGCAACTCAGGGGTACCAACCACCCCCGCCTCCCCCGGCAACT
CAGGGGTACCAGCCACCCCCCCCGCCTCCAGCAAGCCAAATTTACCAACC
CCCGCCGCCGTCTGTGCCTGTGCCACCGGCGTCACAAGGTTATCTACCTC
CGACTCCTGCGCCTCCGCCGTACCAATATCAGCCACCGCCTGCGCCAAGT
GGAGGTTATCAGCCGCCGCCCCCTCCGCCGACTGCTTCTAGTACCTCCCG
CTACGCCCCCCCTCCACCAGTAGCCCAGAGGCAGCCGCCGCCGCCTACGC
CTATGCCACCGGTGAGCCAAGGCTACCATCCACCATCGCAGGGATACAAA
CCGCCTCCGCCGTCTATCCCTTCCTACACGCCTCCCGCGCACACGCCATC
TCCTGCTCCGACCGTGGCGCTCCGGCGCGTGAACCAAACCCACCAGCCCC
CGCCGCCGGCCCCTAGCTCCGAGACCGTGCCAGCGTACATGCGCCCCGGG
CTTCGCTCTACGTTCGTTGCGGCACCCGAGCCAGCACCGGTATCGGTGCC
GCCGCCGCCCCCAACCAGCCAACCCACGCAAGCTTCATACGCCGCCGCGC
CGCGAGAGTATGGGGGCAACAGCATCGGCCGCGGCGGGTACACGGTGCCC
GTATCGGCGCAAACGCCAGCAGCGGCCCAGTACCCCACGCCGACCCCCGC
GCAGGAATACAGGGCCGCGGTACCATCAGCCTCTCAGGGATATTCTCCGC
CGCCGCCCCCTCAGCCTCACCCGCCGACAAGCTTTGGAGCGAGGTCGGAC
GTCTTGGACCCTGTGGCCATGGGAGAGGTACAGCAACGAGAGATGTCAGG
CCCGCCTCCTCCACCGCCAAAGCGAGGGCCGCCGCCGATTCCGAGCTCGG
CACCGCCGCCCACGCCCCCGCCTCCCGTGCCTTCAAGAGGTCCGCCGCCG
CTACCAAGAGGGGCACCTCCGCCCCTTCCGGGGGGAGCACCACCACCGAT
ACCATCTTACGGCCCGCCCTCAATTCCCTCAGCCCCATACAGATCCCCGC
CCCCGATTCCGGGAGGTGCGCCGCCCCCGATTCCGGGTGGCGCGCCGCCG
CCACTTCCAGGGGTTGCACCTCCGCCTGCGGCAAATTATGGACGACCTGA
GCTACCCCGCTCCTCGCCGCTTAATCATTCGCTGCTGAATGCTCCCCCGC
CTCCGCCTCCTCCGGCAACTCAGGGGTATCAACCACCCCTGCCTCCTCCG
GCAACTCAGGGGTACCAACCACCCCCGCCTCCCCCGGCAACTCAGGGGTA
CCAGCCACCCCCCCCGCCTCCAGCAAGCCAAATTTACCAACCCCCGCCGC
CGTCTGTGCCTGTGCCACCGGCGTCACAAGGTTATCTACCTCCGACTCCT
GCGCCTCCGCCGTACCAATATCAGCCACCGCCTGCGCCAAGTGGAGGTTA
TCAGCCGCCGCCCCCTCCGCCGACTGCTTCTAGTACCTCCCGCTACGCCC
CCCCTCCACCAGTAGCCCAGAGGCAGCCGCCGCCGCCTACGCCTATGCCA
CCGGTGAGCCAAGGCTACCATCCACCATCGCAGGGATACAAACCGCCTCC
GCCGTCTATCCCTTCCTACACGCCTCCCGCGCACACGCCATCTCCTGCTC
CGACCGTGGCGCTCCGGCGCGTGAACCAAACCCACCAGCCCCCGCCGCCG
GCCCCTAGCTCCGAGACCGTGCCAGCGTACATGCGCCCCGGGCTTCGCTC
TACGTTCGTTGCGGCACCCGAGCCAGCACCGGTATCGGTGCCGCCGCCGC
CCCCAACCAGCCAACCCACGCAAGCTTCATACGCCGCCGCGCCGCGAGAG
TATGGGGGCAACAGCATCGGCCGCGGCGGGTACACGGTGCCCGTATCGGC
GCAAACGCCAGCAGCGGCCCAGTACCCCACGCCGACCCCCGCGCAGGAAT
ACAGGGCCGCGGTACCATCAGCCTCTCAGGGATATTCTCCGCCGCCGCCC
CCTCAGCCTCACCCGCCGACAAGCTTTGGAGCGAGGTCGGACGTCTTGGA
CCCTGTGGCCATGGGAGAGGTACAGCAACGAGAGAATGCAGTCCGTGGAC
TGCTCCACAGAGATCCTGCGGCGGCGCTGCGTAAGGCGCTGGAGGACCCG
CCCATTCAATGCAAAGATCCTGCCGTCAAGAATGCAGTCCGTGGACTGCT
CCACAGAGATCCTGCGGCGGCGCTGCGTAAGGCGCTGGAGGACCCGCCCA
TTCAATGCAAAGATCCTGCCGTCAAGGACAAGAGCTCGGAGTGCGTTTTG
ATGGTGCTGACGGGAGTGCGGGAGGATAAGATCGACGAATGTCTGGCGGG
CTTGTCCTTGGACGAAAATGATCTGCTCGTCAAGTACGTCTACAAAGGAC
TCGGCATCCCTCGCAACAACGGCCCGCTCTTCAAGTGGCATGCCAAGGAC
AAGAGCTCGGAGTGCGTTTTGATGGTGCTGACGGGAGTGCGGGAGGATAA
GATCGACGAATGTCTGGCGGGCTTGTCCTTGGACGAAAATGATCTGCTCG
TCAAGTACGTCTACAAAGGACTCGGCATCCCTCGCAACAACGGCCCGCTC
TTCAAGTGGCATGCCAAGGCGCTGGCGAAGGGCGGCACGGGATGCATCAT
GCGCTCCCTCGTCGCCCGGCAGACGGTCTGAGCGCTGGCGAAGGGCGGCA
CGGGATGCATCATGCGCTCCCTCGTCGCCCGGCAGACGGTCTGA
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