mRNA_F-serratus_M_contig84.19778.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig84.19778.1
Unique NamemRNA_F-serratus_M_contig84.19778.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: D8LCU0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCU0_ECTSI)

HSP 1 Score: 214 bits (546), Expect = 2.540e-67
Identity = 105/164 (64.02%), Postives = 129/164 (78.66%), Query Frame = 1 
Query:  286 MNGVKLLRSEGSV--DLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVEEDDE 771
            MNG+KLL+S+G        A V+IFEYDRRF QAYP+SFVYYD+NEP  VPD LRGS+DY+LMDPPYL+ EC+GKFLETAD +AR PR A            + P TPMMFITSPLNH++L+E  GLR+T ++LAF+SKFATPMSL+TNY S+ALGGWVEE+++
Sbjct:    1 MNGIKLLKSDGWTCGAGGGATVYIFEYDRRFDQAYPESFVYYDFNEPLAVPDDLRGSVDYILMDPPYLNPECIGKFLETADVIARRPR-AAVAGDGDGKEEAAPPVTPMMFITSPLNHAYLRENMGLRRTPYQLAFKSKFATPMSLYTNYPSDALGGWVEEEED 163
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: A0A835ZDP6_9STRA (Putative N6-adenine methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDP6_9STRA)

HSP 1 Score: 149 bits (376), Expect = 1.230e-41
Identity = 75/145 (51.72%), Postives = 96/145 (66.21%), Query Frame = 1 
Query:  337 AAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVEEDDE 771
            + VHIFEYD RFG+AYP  FV YDYN P  VP+ LRG+ DYVL DPPYL+ +CV +F +T   LAR P  A+            +  TPMMF+TSP NH+ L    G+R+T F++ F+SKFATP+++F NY S  LG +V ED E
Sbjct:   14 SGVHIFEYDARFGKAYPVQFVQYDYNHPLDVPEHLRGACDYVLADPPYLNPQCVTEFFQTMQLLARVPWSADAAP--------DAEVTPMMFVTSPRNHAQLLRDMGMRRTPFQVKFQSKFATPIAIFLNYRSTRLGDFVHEDPE 150
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: W2PIG9_PHYPN (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2PIG9_PHYPN)

HSP 1 Score: 149 bits (376), Expect = 8.740e-41
Identity = 89/233 (38.20%), Postives = 120/233 (51.50%), Query Frame = 1 
Query:   61 DLSADTLAALRAHLAIKDATQVEEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVKLLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVE 759
            +LSADTLAAL+AHL  +          Q  K   V+EDF LSQFWYD+ T RA+A+E +  ++  R A +S P+       ++ E    +    V +FEYDRRF + Y   FV+Y+YNEP  +PD      DYVL+DPPYL+T C+GKF ET   LA+                 +   TP  FIT+ +    +    G   + F   FESK +     +TNY SE  G   E
Sbjct:    8 ELSADTLAALQAHLQTQ----------QAQKDAAVSEDFRLSQFWYDDRTGRALAQEAIDQSKEKRIAFVSTPAAYRDFLKIQEESDSPIKGDNVFLFEYDRRFDEKYSGHFVFYNYNEPTNLPDKFHHFFDYVLVDPPYLNTNCMGKFAETMRWLAKD--------VESVPGKKAKILTPCTFITARMLRKDIYADLGFTPSGFTPTFESKLSNQFLTYTNYRSERFGESTE 222
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: W4FCM6_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCM6_9STRA)

HSP 1 Score: 147 bits (371), Expect = 3.590e-40
Identity = 94/231 (40.69%), Postives = 126/231 (54.55%), Query Frame = 1 
Query:   61 DLSADTLAALRAHLAIKDATQV--EEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVKLLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALG 747
            +LSA+TLAAL+AHLA   ATQ+  E AD +      V+EDF LSQFWYD+ T  A+ARE L  ++GG  A +S P+    +K L  E         V+IFEYD RFGQ Y D FV+YDYN P  V        DYVL++PPYL+ +C+  F ET   ++R   P +               TP +FI S      + ++ GL  + F   FESK +  ++ + NY SE  G
Sbjct:    8 ELSAETLAALQAHLA---ATQIADESADDE------VSEDFRLSQFWYDDVTGEALAREALEMSKGGPIAFLSTPAAYKALKKLEPERK------NVYIFEYDHRFGQKYGDEFVFYDYNAPLDVDAKFHNFFDYVLVEPPYLTEQCMKGFGETMKLISREVVPTDHGKKVMI--------TPNVFINSGALKEAMADELGLTPSGFVPTFESKLSNRLTTYVNYSSERFG 215
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: A0A6G0XCF8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XCF8_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.070e-40
Identity = 90/233 (38.63%), Postives = 124/233 (53.22%), Query Frame = 1 
Query:   61 DLSADTLAALRAHLAIKDATQVEEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVKLLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVE 759
            +LSA+TLAAL AHLA   A   EE+       T ++EDF LSQFWYD+ T   +ARE L  ++GG  A +S P+    +K L  E         V+IFEYD RFG  YPD FV+YDY  P  V     G  DYVL++PPYL+ +C+  F ET   ++R  +                  TP +FI +      ++E+ GL  + F   FESK +  ++ + NY+SE  G + E
Sbjct:   11 ELSAETLAALHAHLA---AVNTEES-------TDISEDFRLSQFWYDDKTGETLAREALEKSKGGPIAFLSTPAAFKALKKLEPERK------DVYIFEYDHRFGDKYPDEFVFYDYIAPLAVDSKFHGFFDYVLVEPPYLTEQCLKGFGETMRLISRELKKTASGKQVM--------ATPNVFINTGNLRDVMREELGLEPSGFVPTFESKLSNRLTTYINYDSERFGPYEE 219
[Close]
BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: A0A1V9YQ01_9STRA (N(6)-adenine-specific DNA methyltransferase 2 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YQ01_9STRA)

HSP 1 Score: 147 bits (370), Expect = 5.830e-40
Identity = 89/229 (38.86%), Postives = 123/229 (53.71%), Query Frame = 1 
Query:   61 DLSADTLAALRAHLAIKDATQVEEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVKLLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALG 747
            +LS +TLAAL+AHLA   A QV + D        V+EDF LSQFWYD+ T  A+ARE L  ++GG  A +S P+    +K L  E         V+IFEYD RFG+ Y D+FV+YDYN P  V        DYVL++PPYL+++C+  F +T   ++R  +                P TP  FI S   H  +  +  L  + F   FESK +  ++ + NY+SE  G
Sbjct:    8 ELSPETLAALQAHLA---AVQVRDEDED------VSEDFRLSQFWYDQKTGEALAREALEKSKGGPIAFLSTPAAFKALKALEPERE------HVYIFEYDHRFGEKYGDAFVFYDYNNPLNVDSKFHNFFDYVLVEPPYLTSQCLRGFAKTMRLISREVK---------VENGIEVPATPNTFINSGAMHKVMFNELKLVPSGFVPTFESKLSNRLTTYINYDSERFG 212
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: A0A485LNA9_9STRA (Aste57867_23683 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNA9_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.120e-39
Identity = 94/233 (40.34%), Postives = 124/233 (53.22%), Query Frame = 1 
Query:   61 DLSADTLAALRAHLAIKDATQVEEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVKLLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVE 759
            +LS +TLAAL+AHLA     QVE+A     K   V+EDF LSQFWYD+ T  A+ARE L  ++GG  A +S P+    +K L  E         V+IFEYD RFGQ Y D FV+YDYN P  V        DYVL++PPYL+  C+  F ET   ++R     E               TP +FI S      + E+ GL  + F   FESK +  ++ + NYES+  G + E
Sbjct:    8 ELSPETLAALQAHLA---TVQVEDAVASTEKD--VSEDFRLSQFWYDDVTGEALAREALEKSKGGPIAFLSTPAAFKALKKLEPERK------DVYIFEYDHRFGQKYGDQFVFYDYNAPLDVDAKFHKFFDYVLVEPPYLTETCMKGFGETMRLISRQVTREEGQKDVL--------VTPNVFINSGALREAMFEELGLTPSGFVPTFESKLSNRLTTYINYESDRFGKYDE 221
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: A0A0P1AD01_PLAHL (N-adenine-specific dna methyltransferase 2 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AD01_PLAHL)

HSP 1 Score: 144 bits (363), Expect = 7.660e-39
Identity = 88/233 (37.77%), Postives = 123/233 (52.79%), Query Frame = 1 
Query:   61 DLSADTLAALRAHLAIKDATQVEEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVKLLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVE 759
            +LSADTLAAL+AH+       + + DT       VTE+F LSQFWYD+ T RA+A+E +  ++  R A +SAP+       +++E    + +  V +FEYDRRF   Y   FV+YDYN+P  +PD      DY+LMDPPYL+  C+ K+ ET   LA      +            SP T   FIT+ +    +  + G   + F   FESK + P   +TNY SE  G   E
Sbjct:    8 ELSADTLAALKAHIQ----AHLTQNDTS------VTENFRLSQFWYDDQTGRALAQEAIDQSKAKRIAFVSAPAAYRDFLKIQNESDSPIISDNVFLFEYDRRFDAKYNGHFVFYDYNDPTNLPDKFHHFFDYILMDPPYLTVSCMSKYAETMRWLAN-----DVISGPGCKEKILSPCT---FITARMLRKQIYTELGFTPSGFVPTFESKLSNPFLTYTNYHSERFGKIAE 222
[Close]
BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: H3GGL5_PHYRM (Uncharacterized protein n=13 Tax=Phytophthora TaxID=4783 RepID=H3GGL5_PHYRM)

HSP 1 Score: 143 bits (361), Expect = 1.610e-38
Identity = 97/247 (39.27%), Postives = 132/247 (53.44%), Query Frame = 1 
Query:   46 EITLDDLSADTLAALRAHLAIKDATQVEEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGG-RAAVISAPSVMNGVKLLRSEGSVDLDTAA----VHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVEEDDE 771
            E+   +LSA+TLAAL+AHL   +  Q E+A         V+EDF LSQFWYD+ T RA+A+E +  +    R A +S P+       L+SE   +    A    V+IFE+DRRFG+ Y D F +YDYN P  +PD      DYVLM+PP+LS +C+ KF +T   LAR     +            +P+T   FI S L    ++   G   T F  +FESK +  +  +TNY SE  G   EE DE
Sbjct:    3 ELLASELSAETLAALQAHLL--ERHQEEDAP--------VSEDFRLSQFWYDDKTGRALAQEAIDHSSSELRIAFVSTPAAYRDFLKLQSEEQDEAKRVAMGENVYIFEFDRRFGEKYGDRFCFYDYNAPTDLPDKFHHFFDYVLMEPPHLSPDCLAKFSDTMRWLAR-----DVDKVPGKKDRVMNPST---FINSQLLRKEMRADLGFTPTGFYPSFESKLSNHLLTYTNYASERFGPCEEEPDE 231
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BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Match: A0A3R7K1S2_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K1S2_9STRA)

HSP 1 Score: 142 bits (357), Expect = 6.190e-38
Identity = 85/234 (36.32%), Postives = 117/234 (50.00%), Query Frame = 1 
Query:   61 DLSADTLAALRAHLAIKDATQVEEADTQGTKGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVKLLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGSMDYVLMDPPYLSTECVGKFLETADALARHPRPAEXXXXXXXXXXTSSPTTPMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGGWVEE 762
            +LSADTLAAL+AHL  + A Q             V+EDF LSQFWYD+ T R +A+E +  ++    A +S P+       ++ E    ++   V +FE+DRRF + Y D FV+YDYN P  +P+      DYVL+DPPYL+  C+GKF ET   L+R                      P  FIT+ +    +    G   + F   FESK +     +TNY SE  G   EE
Sbjct:    8 ELSADTLAALQAHLQSQQAAQ----------DANVSEDFRLSQFWYDDKTGRTLAQEAVDHSKDKHIAFVSTPAAYRDFLKIQEESDTPINGDNVFLFEFDRRFDEKYGDHFVFYDYNTPTELPEKFHHFFDYVLVDPPYLNPNCMGKFAETMRWLSRD--------VEAVTGQNDKILNPCTFITARMLRKNIYADLGFTPSGFYPTFESKLSNQFLTYTNYRSECFGESTEE 223
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig84.19778.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LCU0_ECTSI2.540e-6764.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835ZDP6_9STRA1.230e-4151.72Putative N6-adenine methyltransferase-domain-conta... [more]
W2PIG9_PHYPN8.740e-4138.20Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
W4FCM6_9STRA3.590e-4040.69Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A6G0XCF8_9STRA5.070e-4038.63Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A1V9YQ01_9STRA5.830e-4038.86N(6)-adenine-specific DNA methyltransferase 2 n=1 ... [more]
A0A485LNA9_9STRA2.120e-3940.34Aste57867_23683 protein n=1 Tax=Aphanomyces stella... [more]
A0A0P1AD01_PLAHL7.660e-3937.77N-adenine-specific dna methyltransferase 2 n=1 Tax... [more]
H3GGL5_PHYRM1.610e-3839.27Uncharacterized protein n=13 Tax=Phytophthora TaxI... [more]
A0A3R7K1S2_9STRA6.190e-3836.32Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig84contigF-serratus_M_contig84:336741..342344 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score217.2
Seed ortholog evalue8.7e-54
Seed eggNOG ortholog2880.D8LCU0
Preferred nameEFM5
KEGG koko:K03953,ko:K16546
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00146
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006464,GO:0006479,GO:0006807,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008276,GO:0008757,GO:0009987,GO:0016278,GO:0016279,GO:0016740,GO:0016741,GO:0018022,GO:0018023,GO:0018193,GO:0018205,GO:0019538,GO:0032259,GO:0036211,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.methyltransferase activity
EggNOG OGsKOG3350@1,KOG3350@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-07_006880.1
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03036
Exons6
Model size774
Cds size774
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig84.19778.1prot_F-serratus_M_contig84.19778.1Fucus serratus malepolypeptideF-serratus_M_contig84 336741..342344 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932479.474135-CDS-F-serratus_M_contig84:336740..3368951622932479.474135-CDS-F-serratus_M_contig84:336740..336895Fucus serratus maleCDSF-serratus_M_contig84 336741..336895 -
1690964328.9874349-CDS-F-serratus_M_contig84:336740..3368951690964328.9874349-CDS-F-serratus_M_contig84:336740..336895Fucus serratus maleCDSF-serratus_M_contig84 336741..336895 -
1622932479.4928613-CDS-F-serratus_M_contig84:337401..3375371622932479.4928613-CDS-F-serratus_M_contig84:337401..337537Fucus serratus maleCDSF-serratus_M_contig84 337402..337537 -
1690964329.0073187-CDS-F-serratus_M_contig84:337401..3375371690964329.0073187-CDS-F-serratus_M_contig84:337401..337537Fucus serratus maleCDSF-serratus_M_contig84 337402..337537 -
1622932479.5202804-CDS-F-serratus_M_contig84:337942..3381251622932479.5202804-CDS-F-serratus_M_contig84:337942..338125Fucus serratus maleCDSF-serratus_M_contig84 337943..338125 -
1690964329.016694-CDS-F-serratus_M_contig84:337942..3381251690964329.016694-CDS-F-serratus_M_contig84:337942..338125Fucus serratus maleCDSF-serratus_M_contig84 337943..338125 -
1622932479.5445547-CDS-F-serratus_M_contig84:339322..3394281622932479.5445547-CDS-F-serratus_M_contig84:339322..339428Fucus serratus maleCDSF-serratus_M_contig84 339323..339428 -
1690964329.026292-CDS-F-serratus_M_contig84:339322..3394281690964329.026292-CDS-F-serratus_M_contig84:339322..339428Fucus serratus maleCDSF-serratus_M_contig84 339323..339428 -
1622932479.565227-CDS-F-serratus_M_contig84:340752..3408231622932479.565227-CDS-F-serratus_M_contig84:340752..340823Fucus serratus maleCDSF-serratus_M_contig84 340753..340823 -
1690964329.0361562-CDS-F-serratus_M_contig84:340752..3408231690964329.0361562-CDS-F-serratus_M_contig84:340752..340823Fucus serratus maleCDSF-serratus_M_contig84 340753..340823 -
1622932479.5864372-CDS-F-serratus_M_contig84:342221..3423441622932479.5864372-CDS-F-serratus_M_contig84:342221..342344Fucus serratus maleCDSF-serratus_M_contig84 342222..342344 -
1690964329.0470474-CDS-F-serratus_M_contig84:342221..3423441690964329.0470474-CDS-F-serratus_M_contig84:342221..342344Fucus serratus maleCDSF-serratus_M_contig84 342222..342344 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig84.19778.1

>prot_F-serratus_M_contig84.19778.1 ID=prot_F-serratus_M_contig84.19778.1|Name=mRNA_F-serratus_M_contig84.19778.1|organism=Fucus serratus male|type=polypeptide|length=258bp
SRSRSSSCSSDGGPPEITLDDLSADTLAALRAHLAIKDATQVEEADTQGT
KGTLVTEDFGLSQFWYDEGTQRAIAREVLMGARGGRAAVISAPSVMNGVK
LLRSEGSVDLDTAAVHIFEYDRRFGQAYPDSFVYYDYNEPQRVPDGLRGS
MDYVLMDPPYLSTECVGKFLETADALARHPRPAEADGEGHTHTDTSSPTT
PMMFITSPLNHSFLKEKAGLRKTRFRLAFESKFATPMSLFTNYESEALGG
WVEEDDE*
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mRNA from alignment at F-serratus_M_contig84:336741..342344-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig84.19778.1 ID=mRNA_F-serratus_M_contig84.19778.1|Name=mRNA_F-serratus_M_contig84.19778.1|organism=Fucus serratus male|type=mRNA|length=5604bp|location=Sequence derived from alignment at F-serratus_M_contig84:336741..342344- (Fucus serratus male)
TCCCGATCGCGATCGTCTAGTTGCTCGAGTGATGGAGGACCTCCTGAGAT
CACGCTCGATGATCTGTCCGCTGACACACTCGCTGCTCTGAGGGCACACC
TGGCGATCAAAGATGCGACCCAGGTAGAATGCGGGATCTGATGTTTTGCA
CTATTAGTTGGGGCTCTGTTGTAGGCATCCTTGACGCGGCAGCTTGATGT
GGTGCATCTTTGGAGTGTATGGTTAAGGCGACCATCGCAAGGAGGACAGA
GCCGAAAATGATTTGTCGTTTATATTGCAAGTTGACAGTCTCGACAAGCA
TGTGTATAGCGGGTATGGTACACGGAACGGGACCGCCGAACCTGTCTCGC
AAGGCCAAATTCTCAGGCGCGAACGGGGACAGGGAAACAAAAATTTCCCT
CAAGCTGACCACGAGCAGCATAGGTTGATCCATACTCAGCTGTAAAGGAT
TATTATATATACAAAAGACTATATATGTACTTTCACAGCCCTCGTGCTGT
ACTAGCAAAATTGAATTTTACTTACAGCAGGTCGCCCCGGTAGCTCAGAG
GTACCACGTAACCCTCTGACACGTTGGGACGTGAGTTCGATCCCGGCAAA
CGGGATTTTTCTCACTATCAAAAAAACAACTAAAAAACAAAATAAAAATG
CCCAACGGGTGGAGAACGATTAATTCGTTAGTACACAAAATTCGACTTCA
CGGTCGACGAGGGAAAGGAATCGCTGAATCCTTAAGGGACGCGCCGCAGA
AGGAAGGTGGATGAAAAATTCTGTGTGACCCCGGCTGGTACGTCCATTGA
TGTCCAGAATGGATGGGAAGAAAACACAAACACAGTGTACGTTGAGATAG
GGAGTGTTGCCCGCAGAAGCTTCGCCCGTACAACCCTCCCAGATAGCCCT
GTGACTGTTTGAAACAGGATCTGCGCCCCTCCATCGCCTTGTACTTTTTT
TCTTCTTCTTAAATCTCACTTATAGTCGAAGGACCTCATGATTACCATCC
TGCCTGTGGTCACCAAGGATCTTCCCATCTCTCCCCCGGCTCACACCTTA
CAATTTTTTATCGCGATGCAAGTTCAGCAATCTTACAACTCATCAACTAA
TGGTTGAATCTTTGTACTGTACGGTACCTGTGATCTCGACGCGAAAATTA
GTGTTCTTACCGTCGTACGTTCAGTCCTCCTCAAACGACAGGTAAATCAA
TCCCATCCCCCTCTCCCCATCGCCGCCGCCGAGCCCGGAGCGATCGATCC
CGGCTATCCAAGGTCACTCGAGGCTGTTTCTCCGGTTCATGAAAAATATT
ATTTAGTCAATTCGCTAATAGTGTACCGCTCTTGTTTCGTGGCGTGTCCT
CCGCATCGCTGTATGGTGTATGGTGAACTGTATCTTGTACTGCTACTATA
GTTACGTGGCGGTATGAGCTATGAATATAGAAGATAAGAAGAGTCTGTAT
CATAGCTAACAGCGCGACGTACCCGAGACAAAAAAGACGTGAGCAAGGAT
GATCCCTGACCGCCGTGGCAGGTGGAGGAGGCCGACACGCAAGGCACGAA
GGGCACGCTCGTTACGGAAGACTTCGGCCTCTCGCAATTCTGGTGAGCGA
TATGGCCCCACCATCATCTCACATACTGTTAATACCAGTTAATACCAGTT
AATACCGTACCTGGTAGTGATAAGTGTGAGAAAAAGTGGGCTCGAGAGGC
CAAGATCGTATTTTCGCTTCGCCGCTCGAATCTATTAATAGTACAAGTAC
GGTAAAGGTCTGGAGACCTCGGATGTACTTTGACCCTGCGTGGGTGAGAG
ACGCAAGAACGATGGGTTTCTCCCCGACGTTGTACTCTTGACCCAATGTT
ACTGCCATCGGGGAACCCGTTTAAATGTCATGAAGGGGTTTTGCCTTTGC
AGCCTATGATCCCACCTAATCGTTTTGACATGCTATTTTCCCCTCTGATC
GGGGGATGCTATTAACAGAAGTTCTAGATGCCTTCAGATTTCGGGTGCAA
GTTTTTTTTGTTTATATTTTTGTACCAAAAAAGACAGACTGAGTACTATT
ATATGAGGTTTTCGATATTTGAAACAACTGTACTGCAGAGAGTGCAGCAA
TTGCAAAGGGGGGGGAGGGTTCGTTGCAGAGTTGTTCCTCTTGCAATGAG
GCGTTTCCGCCGATGACAAGCAAGCCCGTGGCTCAAAGATACCGCGTGTT
CTAGATGCCGTTCTCTGAAACCTTTCCACTTGATTCCCTGTGCAGTACTT
TCCTACTACACCGTGATGTAAGACATCCTCAAGACAACCAGCAAGGACCT
AAGATACCACGTGTTCCAAATGCCGTTCCCTGAAACCTTTCCGCTTGATT
CCCTGCGCAATAGTCCCTACTATACCGAGATTTTAAGACATCCTCAAGGC
GAACAGCAAGGGTTTAAGACATACCTGATAACAGTTCAGAAGGAGTGGGG
AGGTGCTGGAGCATACGACCCGAAGCCTCTTCGTACGCACACAGAGCTGT
ACAACAGAGTAGCCTGCCTCATAAAGGGCAACGGAAAAGAATGAAACTGA
AAAATAAGCAACGAGTGCTATTGGATAGGCCAGGCCCCCATCCCCCATCC
AAACAAACAAACCTCTACTAGCGGCGGACGTTTTAACGGATGGATTTGAA
GCGGCTTGGAGCAGCTCTGGCCAGAGATAACGCACGGCACACCCACCTCC
CGTTGATGTCACAACGACCAATGATTATCATGGTAACCAATGATTTTCAT
GGCAACCAATGATTATCATGGTAACCAATGACTCTCATGGTGACCAATGA
TTCTCATGGCAACCAATGATTCTCATGGCAACCAATGATCATCACGGTAA
GATGGTAAGATGTACCAGTAACCGATCACATGTCCCCCCATGTAACCAAT
CAACCAATCAAAACAGGTACGACGAGGGCACGCAACGGGCGATCGCGCGG
GAAGTATTGATGGGGGCGAGGGGAGGAAGAGCCGCGGTGATCAGCGCCCC
CTCCGTCATGAACGGCGTCAAGGTGGGTCTCCCCCCCCCCCCTGCTCCCT
GTCACGCCATATGGATGTCCTTCGGTGGTGGGTGGCCTATTTGTACCTCT
ATTACTGTATACTGGTAAAGAGTTACTCTGTGTATGGCAGTATACGAGGT
TTGAGGGGAAGGAAATAAGAACACCACTGTTGCCTCCAAGGGAAGCGGTG
GACGCGAGTGCCGCTGGGCGCCTTGTACTGTAGTAGTGTACTGTAGTAGT
GTGATGTATTAATATAATAGTAGTGTACTGTATTAGTAGTAGTGTACTGT
ATTGATAGTAGTGTAATGTAGTAGTGTACTGTATTAATAGTAGTGTAGTA
GTGTACTGTATTAATAGTAGTGTACTGTAGTAGTGTACTGTAGTAGTGCG
ACTCTTTTTGATGTACTCAGTTTTTTTCTTGTTTTTAATAAGCCCTGTTA
AATAGTGTTGGTTCTACTGTACTCGGTACCCCATCCGTCGTGGTCCCCCC
CCCCAAATATTACTATTATGTACTTTAAGCGTATTCTAAAAAACAGTATT
TGTACAAGATTATTGTCATCAAATCGAAAAGAATAAAAAGCGAGGAAACT
CTGTTATAGGTTTATCTAAACAAAACACACCGTGTTAGAATTAGTTTTAT
GTGTCATCTGTGTCATCTATGGTAGGTGGGTACGCGTCTTGTCATCCGAG
GGTTTTCACTTAACGACATATTTCAAGAGAGTGCTTGCAAAATTCCTAAA
GCTCAAAAACACGGGCGTCCCATAAGAGCACCGACCCCATGTCATGCCCT
CCAGAGGGGGGGGGCAGCAGGAGGATCTTCGGTGCAGTGTTCATTACGGC
CTTTCTCCTGTTGATAGCCATCTTCGAAGCGATTTTAGTTTGGTCTCGAA
CGGTTGTTTCGTACACTGCGTCGTGTTGCTTTCGATGTTATGTTTTTGTA
TATCTCACTTGAGTGGCGATGCTGACACGATCGCTAAGACTGCTGCTTGA
CATTAGCTAACCAGGCGGGGGAAATCCACAGAGTCACATATACTTCCACA
AAACGACGCCCCTCCGATAAGAAGCCAGAAATATTCTCGCCCTCCCCCCC
AAAAATAAATGCAAGACGGTACATGGACTCTTAAGCGTGGCGAAAGGCGC
CAACGTCCTAATAATACTAATAATAACACAACCATCGGCATCACGTTGCA
CCCTCTCGCTCACTGTTAGCTGTTGAGGTCCGAGGGCTCGGTGGACCTCG
ACACGGCCGCCGTACACATCTTCGAGTACGACCGAAGGTTCGGCCAGGCC
TACCCCGACTCCTTCGTGTACTACGATTACAACGAGCCCCAGCGGGTGCC
CGACGGGCTGCGAGGGTCTATGGACTACGTTCTCATGGACCCTCCCTACT
TGGTGAGGCTTAAGAGAGGTCGACCCAACGGCGTCGAAGTAAGAGAAGAA
AAAGTGTGTTCGACGGTGTACTATGTAATCGTAGAGATGCTGTGAGTATC
TCTGGTTTGGAGTTGGTATGAAAACAATAGGCGTTTCGTATCTCGTCGCC
TACACGGAGTTTGAGAAAGCTTCGAAGGCCTCCAAAGTGACAGGCGGAGA
GCCAACGCTCGCCCCCCCCCACCACTGTTATTTTGACGCTTGCCGCGCCT
CTCCCTTTACGAAATCCCAAACGTTTTTTTACGGTCGGGACTCCTTACGC
TCCCCTCCCCTCCCCTCCCCCTGGTTTTTAACCTCATTTGTGTGGAACTC
CTATGGCTAAATTGTACTGGCAATGAAACCCTTTTTTATGGCTTTTCACG
CGGCAAGAGTACGGAGTGCGTCGGAAAGTTCCTGGAAACCGCGGACGCGC
TCGCCCGACATCCCCGGCCTGCGGAAGCGGACGGAGAAGGACACACACAC
ACAGACACCTCGTCACCGACAACGCCAATGATGTTCATAACCAGTGAGTG
TTCATGTTAGTTTATTTCGCGCGTGTGTGTGTGTGTATTTATTAAATTGC
ATATAACCGCGCAATCCGGCCCTATCATCCTAGCCATTCTATGCCACATG
TATGTGTGTGAGTGTTTTCTCATGAAACATAAGTCTGGTACTTCTAAACA
GCTATCGACGTATGTATATAAATATATATATATATATATATTCGTGAAAA
TTGACGCACTTTTCCCCACTTGCCCGGGGAAAGCAGATTTGTCCTTCAGA
AGGATCAGAAATCATGAGAGATGTGGTGTGCGTGTGGGAGGGGGTAGTGC
TATCTACACCTCTCCTGTAGCCCGGATTACTCGCACGCCAGCGAGAACCT
TAGAGCGGTACGCTTCGTAAAATTTAGGGCGGTTGCTCCGCGGGCGATGC
TTCTGATGCGCCTCTCTCTCTCTCTCTCTCTCCCTGGCGCGCGCTGAGTA
TGTGCCACTTGCTTTCCATTTCCCATCACGCGCGCTCTCCTCCCCATAGG
CCCGCTGAATCATTCGTTTTTAAAGGAGAAGGCGGGCCTGAGGAAAACGC
GGTTCCGCCTAGCCTTCGAGAGCAAGTTCGCCACGCCCATGTCGCTCTTC
ACGAACTACGAGAGCGAGGCGCTGGGAGGATGGGTAGAAGAGGATGACGA
GTAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig84:336741..342344-

>mRNA_F-serratus_M_contig84.19778.1 ID=mRNA_F-serratus_M_contig84.19778.1|Name=mRNA_F-serratus_M_contig84.19778.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig84:336741..342344- (Fucus serratus male)
TCCCGATCGCGATCGTCTAGTTGCTCGAGTGATGGAGGACCTCCTGAGAT
CACGCTCGATGATCTGTCCGCTGACACACTCGCTGCTCTGAGGGCACACC
TGGCGATCAAAGATGCGACCCAGTCCCGATCGCGATCGTCTAGTTGCTCG
AGTGATGGAGGACCTCCTGAGATCACGCTCGATGATCTGTCCGCTGACAC
ACTCGCTGCTCTGAGGGCACACCTGGCGATCAAAGATGCGACCCAGGTGG
AGGAGGCCGACACGCAAGGCACGAAGGGCACGCTCGTTACGGAAGACTTC
GGCCTCTCGCAATTCTGGTGGAGGAGGCCGACACGCAAGGCACGAAGGGC
ACGCTCGTTACGGAAGACTTCGGCCTCTCGCAATTCTGGTACGACGAGGG
CACGCAACGGGCGATCGCGCGGGAAGTATTGATGGGGGCGAGGGGAGGAA
GAGCCGCGGTGATCAGCGCCCCCTCCGTCATGAACGGCGTCAAGGTACGA
CGAGGGCACGCAACGGGCGATCGCGCGGGAAGTATTGATGGGGGCGAGGG
GAGGAAGAGCCGCGGTGATCAGCGCCCCCTCCGTCATGAACGGCGTCAAG
CTGTTGAGGTCCGAGGGCTCGGTGGACCTCGACACGGCCGCCGTACACAT
CTTCGAGTACGACCGAAGGTTCGGCCAGGCCTACCCCGACTCCTTCGTGT
ACTACGATTACAACGAGCCCCAGCGGGTGCCCGACGGGCTGCGAGGGTCT
ATGGACTACGTTCTCATGGACCCTCCCTACTTGCTGTTGAGGTCCGAGGG
CTCGGTGGACCTCGACACGGCCGCCGTACACATCTTCGAGTACGACCGAA
GGTTCGGCCAGGCCTACCCCGACTCCTTCGTGTACTACGATTACAACGAG
CCCCAGCGGGTGCCCGACGGGCTGCGAGGGTCTATGGACTACGTTCTCAT
GGACCCTCCCTACTTGAGTACGGAGTGCGTCGGAAAGTTCCTGGAAACCG
CGGACGCGCTCGCCCGACATCCCCGGCCTGCGGAAGCGGACGGAGAAGGA
CACACACACACAGACACCTCGTCACCGACAACGCCAATGATGTTCATAAC
CAAGTACGGAGTGCGTCGGAAAGTTCCTGGAAACCGCGGACGCGCTCGCC
CGACATCCCCGGCCTGCGGAAGCGGACGGAGAAGGACACACACACACAGA
CACCTCGTCACCGACAACGCCAATGATGTTCATAACCAGCCCGCTGAATC
ATTCGTTTTTAAAGGAGAAGGCGGGCCTGAGGAAAACGCGGTTCCGCCTA
GCCTTCGAGAGCAAGTTCGCCACGCCCATGTCGCTCTTCACGAACTACGA
GAGCGAGGCGCTGGGAGGATGGGTAGAAGAGGATGACGAGTAAGCCCGCT
GAATCATTCGTTTTTAAAGGAGAAGGCGGGCCTGAGGAAAACGCGGTTCC
GCCTAGCCTTCGAGAGCAAGTTCGCCACGCCCATGTCGCTCTTCACGAAC
TACGAGAGCGAGGCGCTGGGAGGATGGGTAGAAGAGGATGACGAGTAA
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