mRNA_F-serratus_M_contig839.19766.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: D8LKW4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKW4_ECTSI) HSP 1 Score: 295 bits (756), Expect = 4.760e-89 Identity = 231/418 (55.26%), Postives = 264/418 (63.16%), Query Frame = 2
Query: 188 MSSLMKKAGLIFDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTNMLPATERDDMSAGAKGPSVAYEGGIPAGSKPSHQPSSHHLPPPSRGDGGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRPEGAHAGAHISASTPVTAWAIP-TEAIPSAEAALPPE------------------------LPAARL--SSREHGHFMDMSG---KARRPSGGYEEATRGWGPPPTNGPPEMKVE-DDXXXXYAPAQ--TYTADDIPSPPRNRP 1342
M+SL+KKAGL+FD NK KPFLKMSITRL+LL+NKK N+IKI K+ IA+LL++GKEEKARI+VEQVIREDFTIEAYD+LEL CELVAERMR V SQK+VPPDMEQA+ TIIWAADRAEVSEL+TVKSQF KKYG+E+VR AE NEGGCVNPKVV++L C PPS FVVTEYL+GIAEEYDVEYTP P R + XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VTAWA+P ++ IP A A L P+ PA R E GH+ D SG RR SGG+ EAT GWGP + +D Y+P + TY +DIPSPP+ RP
Sbjct: 1 MTSLLKKAGLVFDENKVKPFLKMSITRLNLLVNKKANHIKISKKEIARLLADGKEEKARIKVEQVIREDFTIEAYDVLELHCELVAERMRLVASQKDVPPDMEQAVCTIIWAADRAEVSELSTVKSQFVKKYGSEYVRLAELNEGGCVNPKVVEKLDCQPPSSFVVTEYLLGIAEEYDVEYTPAA------------------------------------------PIRRKSSTDRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTAWALPPSDGIPLATATLSPQNSFGGXXXXXXXXXSAGWDPSAAATPADRYVPGENEKGHYRDTSGGNNPYRRGSGGFAEATSGWGPSDAGLDAGAGAKGEDAPPPYSPPRKATYDHNDIPSPPKARP 376
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A7S1XZY1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZY1_9STRA) HSP 1 Score: 204 bits (520), Expect = 7.070e-56 Identity = 107/183 (58.47%), Postives = 137/183 (74.86%), Query Frame = 2
Query: 188 MSSLMKKAGLIFDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTP 736
MSS M GL F+ NK KP L+M ++RL++ INKKTN +K +R + LL E KEEKARIRVE VIREDFTIEAY+IL L CEL+ ER+R VD+++E PPD+ +A+ T+IWA DRAE+SEL ++SQF KKYGAEFV+ A++N G CVN +VV +L PPS +V YL IA+EY VE+ P
Sbjct: 49 MSSFMAAIGLGFNVNKAKPALQMCVSRLNININKKTNQVKAKRREVGMLLREQKEEKARIRVEAVIREDFTIEAYEILALLCELLTERIRLVDAKEECPPDLMEAVCTLIWATDRAEISELEVIRSQFRKKYGAEFVKDAQDNIGSCVNDRVVVKLGVNPPSALLVEAYLREIAKEYGVEWAP 231
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A7S2HRV7_9STRA (Hypothetical protein n=3 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HRV7_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.180e-50 Identity = 104/195 (53.33%), Postives = 142/195 (72.82%), Query Frame = 2
Query: 197 LMKKAGLI-FDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTNMLPATERDDMSA 778
+M+ GL+ F+ +K KP+LKM++ R +L NKKTN IK KRTIA+LL++ KEEKARI+VE VIR+DFTIEAY+ILEL C+LV ERMR + ++KE P DM +AI T++W+ +R E +EL V QF+ KYG EFV A N GGCVN +V+ +L PP+ ++V EYL IA EY+V++ PT + + E DM+A
Sbjct: 1 MMEALGLVKFNPDKLKPYLKMAVHRFEILNNKKTNLIKQEKRTIAQLLADEKEEKARIKVEHVIRQDFTIEAYEILELLCDLVHERMRLLVAEKECPDDMREAICTLLWSVNRTECAELGEVTKQFKLKYGKEFVEHAMGNVGGCVNERVMHKLSIQPPTAYLVREYLTTIAGEYNVDWVPTTVGISDE--DMTA 193
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A836CJV4_9STRA (Regulator of Vps4 activity in the MVB pathway-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJV4_9STRA) HSP 1 Score: 188 bits (477), Expect = 5.070e-49 Identity = 108/228 (47.37%), Postives = 148/228 (64.91%), Query Frame = 2
Query: 188 MSSLMKKAGLIFDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNE----------------GGCVNPK-------VVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTNMLPATERDDMSAGAKGPSVA 802
M+S++K G+ FD KTK +LKMS+ RL + INKKTN++++ KR +A+LL EGKE+KARIRVEQ+IR+D T AY+ILELQC+L+ +RMR+++SQ +P D+ +AI TIIWAADR E EL+ VK QF KKYG E ++ A NE GC+NPK V ++L PPS F+V YLV IA+E+ V++ PA E D+ G ++A
Sbjct: 1 MTSILKAVGIGFDGPKTKAYLKMSMQRLQMHINKKTNSVEMCKREVARLLGEGKEDKARIRVEQIIRDDATRGAYEILELQCDLLVQRMRYIESQSTLPTDLLEAISTIIWAADRTEAEELSKVKDQFAKKYGRETMQRAMRNEIEMXXXXXXXXXXXXECGCMNPKYGXXXPKVAEQLSVEPPSNFLVQSYLVEIAKEFSVDWK-----PAAEAVDLRTGLTSSAMA 223
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A067D044_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D044_SAPPC) HSP 1 Score: 179 bits (455), Expect = 1.640e-47 Identity = 90/175 (51.43%), Postives = 125/175 (71.43%), Query Frame = 2
Query: 221 FDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTNM 745
F +K KP LKM++ R+ ++ NKK N K++++ +AKLL+EGKEEKARIRVE +IREDF +EAY+ILEL CELVAER + +++ P DM +A+ T+IWAA+R E+ EL VKSQ KKYG +F AA N GCVN +V+ +L PP+ F+V YL IA++++V + P M
Sbjct: 4 FSVDKLKPNLKMAVGRIGIIKNKKANAAKVLRKEVAKLLAEGKEEKARIRVEGLIREDFVVEAYEILELLCELVAERAALIKAERACPYDMREAVYTLIWAANRTEIPELNEVKSQLTKKYGQDFAAAALRNVDGCVNERVIHKLSVQPPNSFLVINYLKEIAKQHNVNWVPIEM 178
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A8K1CPE0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPE0_PYTOL) HSP 1 Score: 178 bits (452), Expect = 9.110e-47 Identity = 102/221 (46.15%), Postives = 138/221 (62.44%), Query Frame = 2
Query: 221 FDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTNM--------LPA-TERDDMSAGAKGPSVA--YEGGIPAGSKPSHQPS 850
FD NK KP LKM++ R+ ++ NKK N ++R IA LL +GKEEKARIRVE +IR+DFT+E Y+I+EL CELVAER V +++E P DM +A+ T+IWAA+R E+ ELT VK Q KKYG +F AA N GCVN +V+ +L PPS ++V Y+ IA+++ V++ P +PA T +A GP A Y P G PS P+
Sbjct: 4 FDVNKLKPNLKMAVHRIGIIKNKKKNATIAVRREIAALLGDGKEEKARIRVEGIIRDDFTVEGYEIIELLCELVAERANLVKTERECPYDMREAVCTLIWAANRTEIPELTEVKKQLTKKYGQDFAAAAIRNVDGCVNERVMQKLSVQPPSAYLVVNYMKEIAKQFKVDWEPDETVIVDPLAPIPAPTGASITTAAVSGPDFAALYASAPPPGKIPSALPN 224
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A7S1ZC30_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZC30_TRICV) HSP 1 Score: 177 bits (449), Expect = 9.560e-47 Identity = 101/211 (47.87%), Postives = 138/211 (65.40%), Query Frame = 2
Query: 221 FDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEG---KEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTNMLPATERDDMSAGAKGPSVAYEGGI---PAGSKP 835
F A+K KP LKM+++R ++ NKKT +K R IAKLL+E KEEKA+IR E +IRED T+EAY+IL+L+CEL+AER++ + ++K+ PPD+ I T+IWAA+R ++ EL +K QF+ KYG EFV AA N GGC+N +VV +L PPS F+V YL IA+E++V + P L E + A G SV G PA S P
Sbjct: 66 FKASKLKPLLKMAVSRFAIASNKKTALMKQQMREIAKLLAEEPTPKEEKAKIRAESLIREDNTVEAYEILQLECELLAERIKLIATEKQCPPDLVSCISTLIWAANRVDIPELADIKKQFKYKYGKEFVEAAMNGAGGCLNERVVAKLSVQPPSAFLVQTYLEKIADEFEVGWKPAVPLSGGEMAEPMAAPVGYSVQVAPGTGLAPAASAP 276
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: K3WMZ0_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMZ0_GLOUD) HSP 1 Score: 180 bits (456), Expect = 1.060e-46 Identity = 99/203 (48.77%), Postives = 135/203 (66.50%), Query Frame = 2
Query: 221 FDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTNM--------LPA-TERDDMSAGAKGPSVA 802
F+ NK KP LKM++ R+ ++ NKK N ++R IA LL++GKEEKARIRVE +IR+DFT+E Y+ILEL CELVAER V +++E P DM +A+ T+IWAA+R E+ EL VK Q KKYG +F AA N GCVN +V+ +L PPS ++V Y+ IA+++ V++ P +PA T +SAGA GPS A
Sbjct: 4 FNVNKLKPNLKMAVHRIGIVKNKKANAGIAVRREIATLLADGKEEKARIRVEGIIRDDFTVEGYEILELLCELVAERANLVKTERECPYDMREAVCTLIWAANRTEIPELAEVKKQLIKKYGQDFAAAATRNVDGCVNERVIQKLSVQPPSAYLVVNYMKEIAKQFKVDWEPDEQAVVDPLAPIPAPTGASVVSAGASGPSFA 206
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A6G0WYC0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WYC0_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.100e-46 Identity = 102/227 (44.93%), Postives = 136/227 (59.91%), Query Frame = 2
Query: 221 FDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTN---------MLPATERDDMSAGAKGPSVA--YEGGIPAGSKPSHQPSSHHLPP 868
F+ NK KP LKM++ R+ ++ NKK K + +AKLL+ GKEEKARIRVE +IREDF +EAY+ILEL CEL+AER + S++E P DM +A+ T+IWAA R E+ EL VK+Q KKYG +F AA N GCVN +V+ +L PP+ ++V YL IA++++V++ P M T A GP A Y P G PS PS H P
Sbjct: 4 FNVNKLKPNLKMAVNRIGIVKNKKAIASKAQRTEVAKLLAAGKEEKARIRVEGLIREDFVVEAYEILELLCELIAERSALIKSERECPYDMREAVCTLIWAASRTEIPELNEVKNQLTKKYGQDFTAAAMRNVDGCVNERVIHKLSVQPPNAYLVINYLKEIAKQHNVDWVPDESQIVDPLAPMAAPTGTSVGQAAVSGPDFAAIYAEAPPPGKVPSAFPSVPHATP 230
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Match: A0A1V9Z4K1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z4K1_9STRA) HSP 1 Score: 176 bits (446), Expect = 2.730e-46 Identity = 99/227 (43.61%), Postives = 140/227 (61.67%), Query Frame = 2
Query: 221 FDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLSEGKEEKARIRVEQVIREDFTIEAYDILELQCELVAERMRFVDSQKEVPPDMEQAIRTIIWAADRAEVSELTTVKSQFEKKYGAEFVRAAENNEGGCVNPKVVDRLHCMPPSPFVVTEYLVGIAEEYDVEYTPTN---------MLPATERDDMSAGAKGPSVA--YEGGIPAGSKPSHQPSSHHLPP 868
F+ NK KP LKM++ R+ ++ NKK N K+ ++ +AKLL++GKEEKARIRVE +IREDF +EAY+ILEL CEL+AER+ + +++ P DM +A+ T+IWAA R E+ EL VKSQ KKYG +F AA N GCVN +V+ +L PP+ ++V Y+ IA++++V + P M+ T A GP A Y P G PS P+ + P
Sbjct: 4 FNENKLKPNLKMAVGRIGIVKNKKANAAKVARKEVAKLLADGKEEKARIRVEGLIREDFIVEAYEILELLCELLAERVALIKAERSCPYDMREAVCTLIWAATRTEIPELGEVKSQLTKKYGQDFTAAALRNVDGCVNERVIHKLSVQPPNAYLVINYMKEIAKQHNVSWVPDETQIMDPLAPMVAPTGTSVGQAAVSGPDFAAIYAAAPPPGKVPSAFPTVPSIAP 230 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig839.19766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig839.19766.1 >prot_F-serratus_M_contig839.19766.1 ID=prot_F-serratus_M_contig839.19766.1|Name=mRNA_F-serratus_M_contig839.19766.1|organism=Fucus serratus male|type=polypeptide|length=439bp MSSLMKKAGLIFDANKTKPFLKMSITRLSLLINKKTNNIKIMKRTIAKLLback to top mRNA from alignment at F-serratus_M_contig839:193817..200797- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig839.19766.1 ID=mRNA_F-serratus_M_contig839.19766.1|Name=mRNA_F-serratus_M_contig839.19766.1|organism=Fucus serratus male|type=mRNA|length=6981bp|location=Sequence derived from alignment at F-serratus_M_contig839:193817..200797- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig839:193817..200797- >mRNA_F-serratus_M_contig839.19766.1 ID=mRNA_F-serratus_M_contig839.19766.1|Name=mRNA_F-serratus_M_contig839.19766.1|organism=Fucus serratus male|type=CDS|length=2634bp|location=Sequence derived from alignment at F-serratus_M_contig839:193817..200797- (Fucus serratus male)back to top |