mRNA_F-serratus_M_contig1261.1974.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: D8LEE0_ECTSI (DUF2431 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEE0_ECTSI) HSP 1 Score: 336 bits (862), Expect = 3.310e-104 Identity = 168/248 (67.74%), Postives = 190/248 (76.61%), Query Frame = 1
Query: 124 KKKPRHVTYGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRLPETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGRSALDDNVEAPGVFPRIVK 867
K+K +HVTY KEHSVLI GDGDFSFTRGVIRHRGTG GVVATSLDS AVL KYP AE+WL +L+ DGAQV H VDATRL ETLL G+ D+ ++ VLFDRVVFNFPHTG QRTHLNRNLIRDFF+ST+ LVKCAA GGE+HVTLK+K PYS WNV+AMA+ES L+MVR L FD SVFPGY HSTTDP+AK+FDA GA+T+VFCR RS LDDNV+ G FP IV+
Sbjct: 65 KRKLKHVTYAKEHSVLIVGDGDFSFTRGVIRHRGTGAGVVATSLDSEKAVLKKYPRAETWLPKLEADGAQVAHSVDATRLEETLLGAGEGRGDDGGGGG-------------VAGEKTRVLFDRVVFNFPHTGAQRTHLNRNLIRDFFASTKGLVKCAAAGGEVHVTLKDKPPYSGWNVKAMARESELIMVRCLAFDPSVFPGYRHSTTDPQAKKFDAGGARTNVFCRARSELDDNVDESGAFPVIVR 299
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: D8LED8_ECTSI (DUF2431 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LED8_ECTSI) HSP 1 Score: 209 bits (532), Expect = 1.340e-58 Identity = 124/248 (50.00%), Postives = 145/248 (58.47%), Query Frame = 1
Query: 124 KKKPRHVTYGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRLPETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAK-THVFCRGRSALDDN---VEAPGVFP 855
K+K +HVTY KEHSVL+ GDG FSF + HRGT GVVATSLDS AVL KYP AE+WL +L+ DG Q E G VS E + + F RVVFNFPHTG Q THLNR+LI DFF+ST+ LVKCAA GG +HVTLK+K P+S WN K + V D SVFPGY +STTDP+A F+A GA+ T+V C RS LDDN VE FP
Sbjct: 67 KRKLKHVTYAKEHSVLLVGDGCFSFNC-CVEHRGTRAGVVATSLDSLKAVLKKYPQAETWLPKLEADGPQA---------RENPSRGGWRPEGRCGVSGE----------------KNRIWFHRVVFNFPHTGAQSTHLNRDLILDFFASTKGLVKCAAVGGHVHVTLKDKPPFSGWNGNVEGKRADHGGVPG---DPSVFPGYLYSTTDPQAMRFNAEGARRTNVLCPARSELDDNASTVEIHSYFP 285
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: A0A836CCP6_9STRA (DUF2431 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCP6_9STRA) HSP 1 Score: 202 bits (514), Expect = 9.990e-57 Identity = 101/209 (48.33%), Postives = 132/209 (63.16%), Query Frame = 1
Query: 124 KKKPRHVTYGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRLPETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTT 750
+K P+ V+Y ++L+CGDGDFSFTRG+++HR +G GVVATSLDS VL+KYP A WL +L + A+V+HGVDATRL + + R LFDRVVFNFPHTG+QR HLNRNL+R+FF S R VKCA DGGE+HVTLK PY+ W ++ A +G++ +R+L FD + FPGY H +
Sbjct: 72 RKVPKTVSYAANSTILVCGDGDFSFTRGLLKHRRSGAGVVATSLDSHDVVLSKYPDALEWLDRLAD--AKVLHGVDATRLEQAV--------------------------------RPQQLFDRVVFNFPHTGEQRVHLNRNLLRNFFRSARGYVKCAPDGGEVHVTLKEGPPYNGWEIKEAAAAAGMLPIRTLAFDPNQFPGYRHQVS 246
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: A0A1V9ZN60_9STRA (DUF2431 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZN60_9STRA) HSP 1 Score: 178 bits (451), Expect = 5.710e-47 Identity = 93/238 (39.08%), Postives = 136/238 (57.14%), Query Frame = 1
Query: 148 YGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRLPETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGRSALDDNVEAPGVFPRI 861
Y + +L+ GDGDF+F++G++ HRG+G+ ++ATS DS +AV +KY +A + + + + A V+H +DAT+L + + +D LFD ++FNFPH+G+QR H+NR L+ DFF S RS +K GE+H++LKNK PYS+WNV AK SG V+ F + +FPGY H TTDP AK+F+A T+VF RS E P P +
Sbjct: 33 YTAKDVILVLGDGDFTFSKGLVEHRGSGINLIATSFDSSTAVRDKYKNAYTCINAIRQAKAHVLHDIDATKLDQLV-----------------------------HNDAVPALFDYIIFNFPHSGEQRVHINRVLLLDFFGSARSKLKFR---GEVHISLKNKPPYSNWNVEDQAKASGFVLKERRPFRSKLFPGYNHRTTDPDAKKFEADQCTTYVFIVDRSRYPVPTEQPPKTPLV 238
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: M4BFN6_HYAAE (DUF2431 domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFN6_HYAAE) HSP 1 Score: 174 bits (441), Expect = 3.740e-45 Identity = 97/226 (42.92%), Postives = 132/226 (58.41%), Query Frame = 1
Query: 148 YGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRL---PETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGRS 816
Y + +VLI GDGDFSF+RG+++HRGTG+G++ATS DS S V KY +A +A + V+H VDAT+L P+ + G+G K SD +F ++FNFPH+G+QR H+NR L+ +FF S R + GE+HVTLK + PYS+W V AKE+G V+ FD+ +FPGY H TTDP+AK+FD T VF RS
Sbjct: 39 YAPKDTVLIVGDGDFSFSRGLVKHRGTGLGIIATSFDSDSQVCAKYSNAHECIAAVQSSLGLVLHDVDATKLLELPQHVQTGTGSKT---------------------ISD----VFQYIIFNFPHSGQQRVHINRALLLNFFESARDRLSVH---GEVHVTLKTQPPYSNWFVEDRAKEAGFVLKERRKFDSRLFPGYRHRTTDPQAKKFDLDLCVTFVFVVNRS 236
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: G4YGB3_PHYSP (DUF2431 domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YGB3_PHYSP) HSP 1 Score: 171 bits (434), Expect = 4.170e-45 Identity = 96/233 (41.20%), Postives = 134/233 (57.51%), Query Frame = 1
Query: 148 YGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRL---PETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGRSALDDNVE 837
Y E VL+ GDGDFSF+RG+++HRGTG GV+ATS DS S V KYP+A+ +A + V+H VDAT+L P+ + G+G K + P F +VFNFPH+G+QR H+NR L+ +FF S R + GE HVTLK + PYS+W + AK++G V+ F+ +FPGY H TTDP+AK+F+ T+VF RS + + V+
Sbjct: 40 YAAEDDVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESQVRKKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAGMK-------AVPD------------------FFKYIVFNFPHSGQQRVHINRALLLNFFGSARDRLTAH---GEAHVTLKTRPPYSNWFIEDQAKDAGFVLKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRSKVRNRVQ 244
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: A0A485KTF7_9STRA (Aste57867_11420 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTF7_9STRA) HSP 1 Score: 174 bits (442), Expect = 4.920e-45 Identity = 100/251 (39.84%), Postives = 132/251 (52.59%), Query Frame = 1
Query: 124 KKKPRHVTYGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRLPETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHV--LFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGRSALDDNVEAPGVFPRIVKT 870
KK P Y + ++L+ GDGDF+F+RG++ HRG G + ATS DS + V KY +A + + E+ A V+H +DAT+L + PA HV L D ++FNFPH+G+QR H+NR L+ DFF S RS +K GE+H+TLK K PYS+WNV AKESG VM F FPGY H TTDP+AK F+ T+VF R P VF + T
Sbjct: 32 KKAPMQQLYTLQDAILVLGDGDFTFSRGLVTHRGGGANLYATSFDSSTQVRKKYSNANDCITAIVEENAVVLHDIDATKLEKL-----------------PA----------------HVPPLVDYIIFNFPHSGQQRVHINRVLLLDFFESARSKLKFK---GEVHITLKTKPPYSNWNVEDQAKESGFVMKERRPFRIDAFPGYHHRTTDPQAKTFEPDQCITYVFVVNRVKYPVPTINPSVFTPVAST 246
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: D0MYL5_PHYIT (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0MYL5_PHYIT) HSP 1 Score: 170 bits (431), Expect = 5.200e-45 Identity = 98/239 (41.00%), Postives = 134/239 (56.07%), Query Frame = 1
Query: 127 KKPRHVT-------YGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRL---PETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGR 813
K+ RH T Y + +VL+ GDGDFSF+RG+++HR TG GV+ATS DS S V KYP+A+ +A + V+H VDAT+L P+ + G+G + + P F +VFNFPH+G+QR H+NR L+ +FF S R + GE HVTLK + PYS+W + AK +G VM FD +FPGY H TTDP+AK+F+A T+VF R
Sbjct: 22 KRQRHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKVKTGTG-------LKTIPD------------------FFQYIVFNFPHSGQQRVHINRALLLNFFESARDRLTVR---GEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVFVVNR 232
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: A0A225WPB9_9STRA (DUF2431 domain-containing protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WPB9_9STRA) HSP 1 Score: 169 bits (428), Expect = 1.640e-44 Identity = 95/236 (40.25%), Postives = 134/236 (56.78%), Query Frame = 1
Query: 124 KKKPRHVTYGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRL---PETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGRSAL 822
K++ Y + +VL+ GDGDFSF+RG+++HRGTG GV+ATS DS S V +KYP+A+ +A + V+H VDAT+L P+ + G+G K P F +VFNFPH+G+QR H+NR L+ +FF S R + GE HVTLK + PYS+W + AK +G VM F+ +FPGY H TTDP+AK+F+ T+VF R+ +
Sbjct: 26 KQEASTQVYAADDTVLVLGDGDFSFSRGLVKHRGTGRGVLATSFDSESKVRSKYPNAQECIAAVRSAHGLVLHDVDATKLLELPQQVKTGAGLK---------PVPD----------------FFHYIVFNFPHSGQQRVHINRALLLNFFESARDRLTAQ---GEAHVTLKTRPPYSNWFIEEQAKAAGFVMKERRKFNIRLFPGYRHRTTDPQAKKFEPDLCVTYVFVVNRAKV 233
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Match: A0A833SYA2_PHYIN (DUF2431 domain-containing protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SYA2_PHYIN) HSP 1 Score: 172 bits (435), Expect = 2.580e-44 Identity = 99/240 (41.25%), Postives = 135/240 (56.25%), Query Frame = 1
Query: 127 KKPRHVT-------YGKEHSVLICGDGDFSFTRGVIRHRGTGVGVVATSLDSRSAVLNKYPHAESWLAQLDEDGAQVVHGVDATRL---PETLLEGSGGKIDNADVSSEPAXXXXXXXXXXXXSDRKHVLFDRVVFNFPHTGKQRTHLNRNLIRDFFSSTRSLVKCAADGGEIHVTLKNKRPYSDWNVRAMAKESGLVMVRSLLFDASVFPGYCHSTTDPKAKEFDAVGAKTHVFCRGRS 816
K+ RH T Y + +VL+ GDGDFSF+RG+++HR TG GV+ATS DS S V KYP+A+ +A + V+H VDAT+L P+ + G+G + + P F +VFNFPH+G+QR H+NR L+ +FF S R + GE HVTLK + PYS+W + AK +G VM FD +FPGY H TTDP+AK+F+A T+VF RS
Sbjct: 22 KRQRHGTQETSTQLYAADDTVLVLGDGDFSFSRGLVKHRSTGQGVIATSFDSESQVRRKYPNAQECIAAVRSAHGLVLHDVDATKLFELPQKVKTGTG-------LKTIPD------------------FFQYIVFNFPHSGQQRVHINRALLLNFFESARDRLTVR---GEAHVTLKTRPPYSNWFIEDQAKIAGFVMKERRQFDIKLFPGYRHRTTDPQAKKFEAHLCVTYVFVVNRS 233 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1261.1974.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1261.1974.1 >prot_F-serratus_M_contig1261.1974.1 ID=prot_F-serratus_M_contig1261.1974.1|Name=mRNA_F-serratus_M_contig1261.1974.1|organism=Fucus serratus male|type=polypeptide|length=550bp MDEIAVSVSGAEAGGGGGRKKKPRHVTYGKEHSVLICGDGDFSFTRGVIRback to top mRNA from alignment at F-serratus_M_contig1261:65238..71963- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1261.1974.1 ID=mRNA_F-serratus_M_contig1261.1974.1|Name=mRNA_F-serratus_M_contig1261.1974.1|organism=Fucus serratus male|type=mRNA|length=6726bp|location=Sequence derived from alignment at F-serratus_M_contig1261:65238..71963- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1261:65238..71963- >mRNA_F-serratus_M_contig1261.1974.1 ID=mRNA_F-serratus_M_contig1261.1974.1|Name=mRNA_F-serratus_M_contig1261.1974.1|organism=Fucus serratus male|type=CDS|length=3300bp|location=Sequence derived from alignment at F-serratus_M_contig1261:65238..71963- (Fucus serratus male)back to top |