mRNA_F-serratus_M_contig835.19735.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig835.19735.1
Unique NamemRNA_F-serratus_M_contig835.19735.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 294 bits (753), Expect = 8.330e-93
Identity = 173/331 (52.27%), Postives = 201/331 (60.73%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKAL-------------------------------------VFQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPAT--------PGKGSIMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLNEVFFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDAW 801
            F  RHG SIRRRTSVGQKLPTG++ +A+ TL++LR AL                                     VF+ELGNMDQT +Q EMPVETTLE+ G   +  +  T    +    LCL VMADG KVPL IIFKG PFIPP+T        P KGSI  E+ P                   +SW D  +CTLW SESW  RPN  S+ K+R  ILVL+     DF  R NT VI+IPGGL PLLQPLDRM + +M++LMR +YT Y A+AI +PKTGKL+PPGRG VSTWCKESWAAIT E VK CFKV GLTL LD SEDDAW
Sbjct:  211 FRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGEIYARRNPPASGESPIKGKDLSPAQLESVATEVFEELGNMDQTPVQQEMPVETTLEKGGA--KDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPRKGSIAAEVLPANQTNFGYPVSGMSFGVQERSWYDACECTLWLSESWGFRPNHGSVIKQRHSILVLD-----DF--RTNTTVILIPGGLTPLLQPLDRMLDKEMKRLMRRRYTQYMASAIADPKTGKLQPPGRGLVSTWCKESWAAITAETVKMCFKVCGLTLALDGSEDDAW 532          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5KRZ1_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ1_9PHAE)

HSP 1 Score: 284 bits (726), Expect = 6.000e-89
Identity = 164/332 (49.40%), Postives = 193/332 (58.13%), Query Frame = 1
Query:   19 FSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKG--------SIMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLNEV-------FFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDAW 801
            F+IRR TSVGQKLP GH+ MAW TL++LRKAL+                                     F+ELGNMDQT +QHE PVE       L  R  +   +   E    LCL V ADG KVPL IIFKGTPF+PPATPGKG        SI  E+ P                   KSW D R+C LW  +SWKLRPN+ SI ++RR ILVL++        F A   +  NTIVI IPGGL PLLQPLDRM N +M++L+R  YT +TA A  +PKTGKL PPGRG V+TWCK +WA+ITPE  KTCFK+ GLTL LD SED AW
Sbjct:  168 FNIRRCTSVGQKLPKGHEGMAWATLMKLRKALLERAGKIYAQRYPPAPGENPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHETPVER------LWKRPVRRMPASPPEERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETAKTCFKICGLTLALDGSEDHAW 493          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5KE45_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE45_9PHAE)

HSP 1 Score: 281 bits (720), Expect = 3.960e-88
Identity = 168/371 (45.28%), Postives = 206/371 (55.53%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLE---------------------------------GRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKG--------SIMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLNEV-------FFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDAW 801
            F +R+ FSIRRRTSVG +LP GH+ MAW TL++LRKAL+                                     F++LGNMDQT +Q+EMPVETTLE+ G +                                 G+ ++  T         LCL V ADG+KVPL IIFKGTPF+PPATPGKG        SI  E+ P                   KSW D R+  LW  +SWKLRPN+ S+ ++RR ILVL++        F A   +  NTIVI IPGGL PLLQPLDRM N +M++L+R  YT +TA A  +PKTGKL PPGRG V+TWCK +WA+ITPE VKTCFK+ GLTL LD SED AW
Sbjct:  125 FRKRNKFSIRRRTSVGIRLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFKDLGNMDQTPVQYEMPVETTLEKTGAKDARIATGAGVCCIRTILKPLPYPPTSCILPPPPGKEKERFT---------LCLAVSADGTKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLREYKLWIKDSWKLRPNNGSVVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAW 486          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 275 bits (702), Expect = 1.180e-86
Identity = 163/338 (48.22%), Postives = 197/338 (58.28%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKG--------SIMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLN-------EVFFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDAW 801
            F +R+GFSIRRRTSVGQKLP G + MAW T+++LR+ALV                                     F+ELGNMDQT +QHE+PVETTLE+ G   +  +  T    +    L L VMADG KV   IIFKGTPF PP   GKG        S+  EI P                   KSWSD R+C  W S SWKLRPN+ SI ++R  ILVL+       E F A   +  NTIVI IPG L PLLQPLDRM N +M++L+R KYT Y+A+A+ + ++GKLKPP RG VSTWCKE+W + TPE VKTCF + GLTL LD SED AW
Sbjct:   38 FRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGA--KDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFTPPTVSGKGKSTLPRKNSVAWEIHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALKRDANTIVIFIPGRLTPLLQPLDRMLNKQMKRLLRRKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESSTPETVKTCFMICGLTLALDGSEDHAW 373          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 289 bits (739), Expect = 1.270e-86
Identity = 165/328 (50.30%), Postives = 197/328 (60.06%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKG--------SIMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLNEV-------FFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTL 771
            F +R+ FSIRRRTSVGQKLP GH+ MAW TL++LRKAL+                                     F+ELGNMDQT +QHEMPVETTLE  G   +  +  T    +    LCL V ADG KVPL IIFKGTPF+PPATPGKG        SI  E+ P                   KSW D R+C LW  +SWKLRPN+ SI ++RR ILVL++        F A   +  NTIVI IPGGL PL QPLDRM N +M++L+R  YT +TA A  +PKTGKL PPGRG V+TWCK +WA+ITPE+VKTCFK+ GLTL
Sbjct:  192 FCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHEMPVETTLENTGA--KDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVGGMSFGVQEKSWCDLRECKLWIKDSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLIPLFQPLDRMLNKQMKRLLRGMYTAHTAKAARDPKTGKLVPPGRGAVATWCKNAWASITPEIVKTCFKICGLTL 517          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 272 bits (696), Expect = 2.390e-86
Identity = 168/367 (45.78%), Postives = 204/367 (55.59%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKG--------SIMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLN-------EVFFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVV-----------------------------KTCFKVFGLTLVLDCSEDDAW 801
            F +R+GFSIRRRTSVGQKLP G++ MAW T+++LR+ALV                                     F+ELGNMDQT +QHEMPVETTLE+ G   +  +  T    +    L L VMADG KV   IIFKGTPFIPPA  GKG        S+  EI P                   KSWSD R+C  W S SWKLRPN+ SI ++R  ILVL+       E + A   +  NTIVI+IPGGL PLLQPLDRM N +M++L+R KYT Y+A+A+ + ++GKLKPP RG VSTWCKE+W +ITPE V                             KTCFK+ GLTL LD SED AW
Sbjct:   38 FRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGEIYARRHPPAPDESPIKGEDLTFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGA--KDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFIPPAVSGKGKSTLPRKNSVAWEIHPANRAKHDHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPCILVLDDFKCHKDEGYIAALKRDANTIVIVIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSASAVADARSGKLKPPERGVVSTWCKEAWESITPETVSSVRKERFALGDVRAWSGENPACSVXETVKTCFKICGLTLALDGSEDHAW 402          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5KEE8_9PHAE (DDE-1 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEE8_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 3.820e-81
Identity = 158/338 (46.75%), Postives = 187/338 (55.33%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKG--------SIMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLNEV-------FFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDAW 801
            F +R+ F+IRRRTSVGQKLP GH+ MAW TL++LRKAL+                                     F+ELGNMDQT +QHE         R   G+ ++  T         LCL V ADG KVPL IIFKGTPF+PPATPGKG        SI  E+ P                   KSW D R+C LW   SWKLRPN+ SI ++RR ILVL++        F A   +  NTIVI IPGGL PLLQ LDRM N +M++L+              PKTGKL PPGRG V+TWCK +WA+ITPE VKTCFK+ GLTL LD SED AW
Sbjct:  179 FRKRNKFNIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGEIYAQRYPPAPGESPIRGEDLSSSQLELVTDELFEELGNMDQTPVQHE---------RDAGGKEKERFT---------LCLAVSADGKKVPLRIIFKGTPFVPPATPGKGKATQPRKNSIAWEVLPANRSKHGLPVEGMSFGVQEKSWCDLRECKLWIKGSWKLRPNNGSIVRQRRCILVLDDFKCHKDDGFIAALKREANTIVIFIPGGLTPLLQLLDRMLNKQMKRLLXXXXXXXXXXXXXXPKTGKLAPPGRGAVATWCKNAWASITPETVKTCFKICGLTLALDGSEDHAW 498          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5JE48_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JE48_9PHAE)

HSP 1 Score: 258 bits (660), Expect = 6.440e-81
Identity = 143/248 (57.66%), Postives = 168/248 (67.74%), Query Frame = 1
Query:  118 FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPG--------KGSIMEEIAPKSWSD-----TRKCTLWTSESWKLRPNSSSIKKKRRHILVLN-------EVFFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDAW 801
            F+ELGNMDQT +Q EM VETTLE+RG   +  +  T    +    LCL VMADG KVPL IIFKG PFIPP+T G        KGSI  E+ P + +      TR+CTLW SE W+  PN  S+ K+R  ILVL+       E F  D  +R NT VI+IPGGL PLLQPLDRM N ++++LMR + T Y A+AI +PKTGKL+PPGRG VST CKESWAAITPE VK CFKV GLTL LD SEDDAW
Sbjct:  162 FEELGNMDQTPVQQEMLVETTLEKRGA--KDARISTGGKEKDRFTLCLAVMADGGKVPLRIIFKGKPFIPPSTAGRGKNTQPRKGSIAAEVLPANRTKRKAGVTRECTLWLSERWRFWPNHGSVIKQRHSILVLDDFRYHRSESFIEDLRRRTNTTVILIPGGLTPLLQPLDRMLNKEIKRLMRGRCTQYMASAIADPKTGKLQPPGRGLVSTRCKESWAAITPETVKKCFKVCGLTLALDGSEDDAW 407          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 264 bits (674), Expect = 3.070e-80
Identity = 157/337 (46.59%), Postives = 196/337 (58.16%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKGS--------IMEEIAP-------------------KSWSDTRKCTLWTSESWKLRPNSSSIKKKRRHILVLN-------EVFFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDA 798
            F +R+GFSIRRRTSVGQKLP G++ MAW T+++L +ALV                                     F+E+GNMDQ  +QHEMPVETTL++ G +  +R      + +    L L V ADG KV   IIF+GTPFIPP   GKG         +  E+ P                   KSWSD R+C  W S SWKLRPN+ SI ++R  ILVL+       E F A   +  NTIVI IPGGL PLLQPLDRM N +M++L+R KYT Y+ +A+ + ++GKLKPP RG VSTWCKE+W +ITPE VKTC K+ GLTL LD SED A
Sbjct:  232 FRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGEIYARRHPPAPDESPIKGEDLNSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKD-ARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFIPPTVSGKGKSTRPRKNPVAWEMHPANRAKHGHPANGMSFGVQEKSWSDQRECNGWISGSWKLRPNNGSIVQQRPRILVLDDFKCHNDEGFIAALKRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSPSAVADARSGKLKPPERGVVSTWCKEAWESITPETVKTCSKICGLTLALDGSEDHA 567          
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 262 bits (669), Expect = 3.940e-80
Identity = 160/345 (46.38%), Postives = 193/345 (55.94%), Query Frame = 1
Query:    1 FHRRHGFSIRRRTSVGQKLPTGHKRMAWTTLIELRKALV-------------------------------------FQELGNMDQTHIQHEMPVETTLERRGLEGRSRQHRTSES*EGALPLCLTVMADGSKVPLCIIFKGTPFIPPATPGKG--------SIMEEIAP-------------------KSWSDTRKCTLWTSESWKL--------RPNSSSIKKKRRHILVLN-------EVFFADFLKRCNTIVIMIPGGLAPLLQPLDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWAAITPEVVKTCFKVFGLTLVLDCSEDDA 798
            F +R+GFSIRRR SVGQKLP G++ MAW T+ +LR+ALV                                     F+ELGNMDQT +QHEMPVETTLE  G  G+  +  T    +    L L VMADG  V  CIIFKGTPFIPP   GKG        S+  E+ P                   KSWS  ++C  W   SWKL        RPN+ SI ++R  ILVL+       E F A   +  NTIVI IPGGL PLLQPLDRM N +M++L+R KYT Y+A A+ + ++GKLKPP RG VSTWCKE+W  +T E V TCFK+ GLTL LD SED A
Sbjct:  192 FRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGEIYARRHPPAPDESPIKGEDLTSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTG--GKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFIPPTVSGKGKSTLPRKNSVAWEVHPANRAKHGHPANGMSFGVQEKSWSGQQECNGWIPGSWKLCPNNGSMXRPNNGSIVQQRPCILVLDDFKCHKDEGFIAALNRDANTIVIFIPGGLTPLLQPLDRMLNKQMKRLLRGKYTAYSAPAVADARSGKLKPPERGVVSTWCKEAWEFVTSETVNTCFKICGLTLALDGSEDHA 534          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig835.19735.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JQM5_9PHAE8.330e-9352.27DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ1_9PHAE6.000e-8949.40DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KE45_9PHAE3.960e-8845.28DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K6L9_9PHAE1.180e-8648.22DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5K8Y4_9PHAE1.270e-8650.30Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JUK2_9PHAE2.390e-8645.78DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KEE8_9PHAE3.820e-8146.75DDE-1 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5JE48_9PHAE6.440e-8157.66DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JHT8_9PHAE3.070e-8046.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE3.940e-8046.38DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig835contigF-serratus_M_contig835:206956..208354 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score120.9
Seed ortholog evalue5.9e-25
Seed eggNOG ortholog2880.D7FXD3
Preferred namePOGK
KEGG koko:K09228
Hectar predicted targeting categoryother localisation
EggNOG free text desc.DNA binding
EggNOG OGsKOG3105@1,KOG3105@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons4
Model size801
Cds size534
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig835.19735.1prot_F-serratus_M_contig835.19735.1Fucus serratus malepolypeptideF-serratus_M_contig835 206956..207546 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932470.9755473-CDS-F-serratus_M_contig835:206955..2073841622932470.9755473-CDS-F-serratus_M_contig835:206955..207384Fucus serratus maleCDSF-serratus_M_contig835 206956..207384 -
1690964324.5686536-CDS-F-serratus_M_contig835:206955..2073841690964324.5686536-CDS-F-serratus_M_contig835:206955..207384Fucus serratus maleCDSF-serratus_M_contig835 206956..207384 -
1622932470.9907913-CDS-F-serratus_M_contig835:207441..2075461622932470.9907913-CDS-F-serratus_M_contig835:207441..207546Fucus serratus maleCDSF-serratus_M_contig835 207442..207546 -
1690964324.579257-CDS-F-serratus_M_contig835:207441..2075461690964324.579257-CDS-F-serratus_M_contig835:207441..207546Fucus serratus maleCDSF-serratus_M_contig835 207442..207546 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932471.0069273-UTR-F-serratus_M_contig835:207546..2075781622932471.0069273-UTR-F-serratus_M_contig835:207546..207578Fucus serratus maleUTRF-serratus_M_contig835 207547..207578 -
1690964324.5909448-UTR-F-serratus_M_contig835:207546..2075781690964324.5909448-UTR-F-serratus_M_contig835:207546..207578Fucus serratus maleUTRF-serratus_M_contig835 207547..207578 -
1622932471.024724-UTR-F-serratus_M_contig835:208008..2081291622932471.024724-UTR-F-serratus_M_contig835:208008..208129Fucus serratus maleUTRF-serratus_M_contig835 208009..208129 -
1690964324.6036582-UTR-F-serratus_M_contig835:208008..2081291690964324.6036582-UTR-F-serratus_M_contig835:208008..208129Fucus serratus maleUTRF-serratus_M_contig835 208009..208129 -
1622932471.0428624-UTR-F-serratus_M_contig835:208240..2083541622932471.0428624-UTR-F-serratus_M_contig835:208240..208354Fucus serratus maleUTRF-serratus_M_contig835 208241..208354 -
1690964324.6140232-UTR-F-serratus_M_contig835:208240..2083541690964324.6140232-UTR-F-serratus_M_contig835:208240..208354Fucus serratus maleUTRF-serratus_M_contig835 208241..208354 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig835.19735.1

>prot_F-serratus_M_contig835.19735.1 ID=prot_F-serratus_M_contig835.19735.1|Name=mRNA_F-serratus_M_contig835.19735.1|organism=Fucus serratus male|type=polypeptide|length=178bp
MADGSKVPLCIIFKGTPFIPPATPGKGSIMEEIAPKSWSDTRKCTLWTSE
SWKLRPNSSSIKKKRRHILVLNEVFFADFLKRCNTIVIMIPGGLAPLLQP
LDRMFNTKMEQLMRAKYTIYTATAIVNPKTGKLKPPGRGKVSTWCKESWA
AITPEVVKTCFKVFGLTLVLDCSEDDAW
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mRNA from alignment at F-serratus_M_contig835:206956..208354-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig835.19735.1 ID=mRNA_F-serratus_M_contig835.19735.1|Name=mRNA_F-serratus_M_contig835.19735.1|organism=Fucus serratus male|type=mRNA|length=1399bp|location=Sequence derived from alignment at F-serratus_M_contig835:206956..208354- (Fucus serratus male)
TTCCATCGGCGGCACGGGTTCAGCATCCGCCGGCGTACAAGCGTGGGCCA AAAGCTACCAACAGGACATAAGCGTATGGCGTGGACGACACTGATAGAGC TTCGGAAGGCTCTCGTCGAGCGCGCTGGCGAAATCTACGCTGAGCGAAAC CCATGTGCACCTGGTAAAAGCTCCATCGACGAGGAGGACCTCAGTCCCGA GCAGCTGGAGTCGGTGACCCCAGAGGTTTTCCAAGAATTAGGCAACATGG ACCAGACGCATATCCAGCACGAGATGCCGGTCGAGACAACTCTGGAGAGG CGGGGCCTCGAAGGCCGCTCGCGTCAGCACAGGACGTCAGAGTCATGTCG GTACTCTTGCTGCGACGCAGGTGTTGGTTTTGTGTGCACGAAGTCGTTGT TCGTGATGTTTTGCCGCCACACTATGCTCGAGAGAATTTCTGTGTTGTGT ATCGTTTTGTTTTCGTTACAGGGGTGACCATCCATGACGAGGTTGCTGAA GAGAGATATCATCGTCTTGTTGCAGGTGTTTGACTGTTGAATACCTTACC GAAACTGAAAGTCGCTTCTGCTGGTACTGAACGTACTTCATACTGGTCGA TATTTCAAACGACCCTGAATGTGTTACTGTTGGCACTGTCAAACGTTTTG TTGCGGCATCAGTAGGCCTTCGGTACCCGCATCAACAAACGACAAATCGT GAAAGTTGAGACCTCCTTCTCCCGCCCTCCCACCCTCCCACCCTCTCATT GTATAATGATTCCCACGCAGGAAAAGGAGAAGGAGCGCTTCCCCTATGTC TTACTGTCATGGCGGACGGCAGCAAGGTTCCGCTGTGCATCATCTTCAAG GGCACGCCGTTCATCCCGCCGGCGACGCCGGGGAAGGGTTCCATCATGGA AGAGATTGCGCCTGTGAACCGTACCAATAACGGGCATCCTGCGGGAGGCA TGTCTTCCGGCGTGCGGAAGAAGAGCTGGTCCGACACAAGGAAGTGCACC CTTTGGACCTCGGAGAGCTGGAAGCTGCGCCCCAACAGCAGCAGCATCAA AAAGAAGCGCCGGCACATCTTGGTGTTGAACGAAGTTTTCTTTGCTGACT TCCTCAAGAGGTGCAACACCATCGTCATCATGATTCCAGGCGGGTTGGCT CCTCTCCTCCAGCCGCTGGACCGCATGTTCAATACGAAAATGGAGCAGCT GATGCGGGCGAAGTACACCATCTACACTGCGACAGCAATCGTAAACCCCA AGACGGGCAAGCTGAAGCCGCCGGGGCGTGGGAAGGTGTCTACGTGGTGT AAGGAGTCGTGGGCAGCTATCACCCCCGAGGTGGTCAAGACTTGCTTCAA GGTCTTCGGGCTCACGCTCGTGCTCGACTGCAGCGAGGACGACGCGTGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig835:206956..208354-

>mRNA_F-serratus_M_contig835.19735.1 ID=mRNA_F-serratus_M_contig835.19735.1|Name=mRNA_F-serratus_M_contig835.19735.1|organism=Fucus serratus male|type=CDS|length=1068bp|location=Sequence derived from alignment at F-serratus_M_contig835:206956..208354- (Fucus serratus male)
ATGGCGGACGGCAGCAAGGTTCCGCTGTGCATCATCTTCAAGGGCACGCC
GTTCATCCCGCCGGCGACGCCGGGGAAGGGTTCCATCATGGAAGAGATTG
CGCCTATGGCGGACGGCAGCAAGGTTCCGCTGTGCATCATCTTCAAGGGC
ACGCCGTTCATCCCGCCGGCGACGCCGGGGAAGGGTTCCATCATGGAAGA
GATTGCGCCTAAGAGCTGGTCCGACACAAGGAAGTGCACCCTTTGGACCT
CGGAGAGCTGGAAGCTGCGCCCCAACAGCAGCAGCATCAAAAAGAAGCGC
CGGCACATCTTGGTGTTGAACGAAGTTTTCTTTGCTGACTTCCTCAAGAG
GTGCAACACCATCGTCATCATGATTCCAGGCGGGTTGGCTCCTCTCCTCC
AGCCGCTGGACCGCATGTTCAATACGAAAATGGAGCAGCTGATGCGGGCG
AAGTACACCATCTACACTGCGACAGCAATCGTAAACCCCAAGACGGGCAA
GCTGAAGCCGCCGGGGCGTGGGAAGGTGTCTACGTGGTGTAAGGAGTCGT
GGGCAGCTATCACCCCCGAGGTGGTCAAGACTTGCTTCAAGGTCTTCGGG
CTCACGCTCGTGCTCGACTGCAGCGAGGACGACGCGTGGAAGAGCTGGTC
CGACACAAGGAAGTGCACCCTTTGGACCTCGGAGAGCTGGAAGCTGCGCC
CCAACAGCAGCAGCATCAAAAAGAAGCGCCGGCACATCTTGGTGTTGAAC
GAAGTTTTCTTTGCTGACTTCCTCAAGAGGTGCAACACCATCGTCATCAT
GATTCCAGGCGGGTTGGCTCCTCTCCTCCAGCCGCTGGACCGCATGTTCA
ATACGAAAATGGAGCAGCTGATGCGGGCGAAGTACACCATCTACACTGCG
ACAGCAATCGTAAACCCCAAGACGGGCAAGCTGAAGCCGCCGGGGCGTGG
GAAGGTGTCTACGTGGTGTAAGGAGTCGTGGGCAGCTATCACCCCCGAGG
TGGTCAAGACTTGCTTCAAGGTCTTCGGGCTCACGCTCGTGCTCGACTGC
AGCGAGGACGACGCGTGG
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