prot_F-serratus_M_contig833.19724.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig833.19724.1
Unique Nameprot_F-serratus_M_contig833.19724.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length162
Homology
BLAST of mRNA_F-serratus_M_contig833.19724.1 vs. uniprot
Match: D8LRE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRE0_ECTSI)

HSP 1 Score: 215 bits (548), Expect = 4.680e-69
Identity = 110/163 (67.48%), Postives = 128/163 (78.53%), Query Frame = 0
Query:    1 MSEEAKTSSTSVPH-----HVDTMHNVSKFDQSEDPIPKKVPPRGSKDARSFRPSTLAEINMVNKYKPLTVKCGSRSVPILCGNSLEDFLLICGCIFALWMFVLGLTSLLLKSALDTDLRHTAVWIYFWMFILGSLLLAGSIATGQVERRRVEAAQAQMAKDN 158
            MSEEAKT+  +V       H DT   VSKFDQS++PIPK VPPRGSKDARSFRPSTLAEINM+N+Y+PL +KCG ++  I CGNSLED LLI GCI ALW FVLG++ LLLKSA+DTDLRHTA+W+YFW+FILG  LL G IATGQVER R E A A+   D+
Sbjct:    1 MSEEAKTNEVAVSMPKADIHADTQQEVSKFDQSKNPIPKVVPPRGSKDARSFRPSTLAEINMMNRYEPLELKCGGKTFGIGCGNSLEDVLLIMGCILALWSFVLGVSGLLLKSAIDTDLRHTALWVYFWLFILGCFLLGGMIATGQVERFRSERAAAEKQHDD 163          
BLAST of mRNA_F-serratus_M_contig833.19724.1 vs. uniprot
Match: A0A6V1NIL0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NIL0_HETAK)

HSP 1 Score: 77.0 bits (188), Expect = 1.330e-14
Identity = 44/117 (37.61%), Postives = 67/117 (57.26%), Query Frame = 0
Query:   60 KYKPLTV------------KCGSRS---VPILCGNSLEDFLLICGCIFALWMFVLGLTSLLLKSALDTDLRHTAVWIYFWMFILGSLLLAGSIATGQVERRRVE---AAQAQMAKDN 158
            +YKPL +            KCG      +PI CGN+ ED ++I   +  LW  +LG  +LLLK+ +D+    T +WIYF+  I+  +++ GS+ TGQ+ER R E   A +A+ AKD+
Sbjct:   64 QYKPLIIEVKNNPCMCCPAKCGCTKECIIPIGCGNTFEDLVIIFSLLGTLWCGLLGFYTLLLKAQIDSTEHSTVLWIYFFSGIIFVIMVGGSVYTGQIERARSEKKAAEEAEEAKDS 180          
BLAST of mRNA_F-serratus_M_contig833.19724.1 vs. uniprot
Match: A0A8J2SJJ8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SJJ8_9STRA)

HSP 1 Score: 75.9 bits (185), Expect = 1.370e-14
Identity = 45/109 (41.28%), Postives = 63/109 (57.80%), Query Frame = 0
Query:   42 KDARSFRPSTLAEINMVNKYKPLTVKC------GSRSV-PILCGNSLEDFLLICGCIFALWMFVLGLTSLLLKSALDTDLRHTAVWIYFWMFILGSLLLAGSIATGQVE 143
            +D R  RPSTL E+N    Y P   KC      G++    I C  S ED  +IC     LW  +LG+ +LLLK+ALDTD + TA+WI+F   +L ++ +AG++   QVE
Sbjct:   18 RDERQSRPSTLKEMNAQRGYSPY--KCIYNRSDGTQCEWNIACYLSCEDLGIICSLFIVLWACLLGIYTLLLKAALDTDEKDTALWIFFAFGVLFTMFVAGAVGMNQVE 124          
BLAST of mRNA_F-serratus_M_contig833.19724.1 vs. uniprot
Match: F0Y0A6_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y0A6_AURAN)

HSP 1 Score: 75.1 bits (183), Expect = 8.970e-13
Identity = 42/110 (38.18%), Postives = 63/110 (57.27%), Query Frame = 0
Query:   39 RGSKDARSFRPSTLAEINMVNKYKPLTVKCGSRS-----VPILCGNSLEDFLLICGCIFALWMFVLGLTSLLLKSALDTDLRHTAVWIYFWMFILGSLLLAGSIATGQVE 143
            +GSKD R FRP++L EI     Y P  +     +     + + C  S ED  +I      LWM +LG+ +LLLK+ALDTD + TA+WI+F   ++ +L + GS+   +VE
Sbjct:  391 KGSKDERDFRPASLKEIQEKKGYVPFKLVYHHSAGHDVDINLGCFLSCEDLGIIGSLFIVLWMCLLGIYTLLLKAALDTDEKSTALWIFFAFGVIFTLFVTGSVGMNRVE 500          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig833.19724.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LRE0_ECTSI4.680e-6967.48Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6V1NIL0_HETAK1.330e-1437.61Hypothetical protein n=2 Tax=Heterosigma akashiwo ... [more]
A0A8J2SJJ8_9STRA1.370e-1441.28Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
F0Y0A6_AURAN8.970e-1338.18Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..83
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..117
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..106
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 139..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 118..138
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 116..138

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig833contigF-serratus_M_contig833:179679..184914 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig833.19724.1mRNA_F-serratus_M_contig833.19724.1Fucus serratus malemRNAF-serratus_M_contig833 176854..185016 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig833.19724.1 ID=prot_F-serratus_M_contig833.19724.1|Name=mRNA_F-serratus_M_contig833.19724.1|organism=Fucus serratus male|type=polypeptide|length=162bp
MSEEAKTSSTSVPHHVDTMHNVSKFDQSEDPIPKKVPPRGSKDARSFRPS
TLAEINMVNKYKPLTVKCGSRSVPILCGNSLEDFLLICGCIFALWMFVLG
LTSLLLKSALDTDLRHTAVWIYFWMFILGSLLLAGSIATGQVERRRVEAA
QAQMAKDNIVT*
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