prot_F-serratus_M_contig833.19723.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig833.19723.1
Unique Nameprot_F-serratus_M_contig833.19723.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length190
Homology
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BLAST of mRNA_F-serratus_M_contig833.19723.1 vs. uniprot
Match: A0A6H5K3S5_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K3S5_9PHAE)

HSP 1 Score: 171 bits (433), Expect = 1.010e-50
Identity = 81/110 (73.64%), Postives = 88/110 (80.00%), Query Frame = 0 
Query:   74 LWPHYTPLYTNMKVLRRKRLDASMVYYRAGPGTKACFLLSVWGVFFLTWLGVMLALGSPFIIPKDSPEEKLALSRPVFGGAAMYLVCAFLAGFSWYKSSCGAGRLPTMGE 183
            LWP YTPLYTNMKVLRRKRLDASM+Y RAGP TK CFL S+WG  FLTWLG  LA GSP+IIP+D P   LA SR VFG AAMYLVCA L G+SWYKSS GA  LPT+G+
Sbjct:   88 LWPPYTPLYTNMKVLRRKRLDASMMYSRAGPCTKICFLTSLWGASFLTWLGFTLASGSPYIIPEDPPATNLARSRSVFGAAAMYLVCACLTGYSWYKSSWGARPLPTLGD 197
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig833.19723.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5K3S5_9PHAE1.010e-5073.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 170..189
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 131..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..130
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 150..169
NoneNo IPR availableTMHMMTMhelixcoord: 150..169
NoneNo IPR availableTMHMMTMhelixcoord: 108..130

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig833contigF-serratus_M_contig833:175404..176656 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig833.19723.1mRNA_F-serratus_M_contig833.19723.1Fucus serratus malemRNAF-serratus_M_contig833 172041..176841 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig833.19723.1 ID=prot_F-serratus_M_contig833.19723.1|Name=mRNA_F-serratus_M_contig833.19723.1|organism=Fucus serratus male|type=polypeptide|length=190bp
MRPMKVLRQRMSTSVGDAQGYTSIQLSDVDEGDGDEKEYWASGDEQGVGR
RRRRRSGAARAEEGRRLGDRESDLWPHYTPLYTNMKVLRRKRLDASMVYY
RAGPGTKACFLLSVWGVFFLTWLGVMLALGSPFIIPKDSPEEKLALSRPV
FGGAAMYLVCAFLAGFSWYKSSCGAGRLPTMGEGSFENR*
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