prot_F-serratus_M_contig833.19726.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig833.19726.1
Unique Nameprot_F-serratus_M_contig833.19726.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length205
Homology
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BLAST of mRNA_F-serratus_M_contig833.19726.1 vs. uniprot
Match: A0A6H5J936_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J936_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 4.140e-15
Identity = 37/54 (68.52%), Postives = 44/54 (81.48%), Query Frame = 0 
Query:   68 DADHNKLRSACDNCSLKKIKCDGEPTCQACRKRNVRCHYSIKRPTGPKRAALAA 121
            D +  + RSACD+CSLKKIKCDG   CQACRKR V CH+S+KRPTGP++AAL A
Sbjct:   81 DGEGTRRRSACDSCSLKKIKCDGLKPCQACRKRGVTCHFSVKRPTGPRKAALLA 134
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BLAST of mRNA_F-serratus_M_contig833.19726.1 vs. uniprot
Match: A0A3M7GHS0_HORWE (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Hortaea werneckii TaxID=91943 RepID=A0A3M7GHS0_HORWE)

HSP 1 Score: 55.8 bits (133), Expect = 1.140e-5
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = 0 
Query:   73 KLRSACDNCSLKKIKCDGE-PTCQACRKRNVRCHYSIKRPTG--PKRAALAAA 122
            KLR+ACD C LKK+KC GE PTC  C +  +RC YS ++P G   KR  + AA
Sbjct:   37 KLRAACDECRLKKLKCTGEQPTCSRCGREGIRCIYSPQKPMGRPKKRQRMEAA 89
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BLAST of mRNA_F-serratus_M_contig833.19726.1 vs. uniprot
Match: D7FLU9_ECTSI (C6 transcription factor Prf n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLU9_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.170e-5
Identity = 24/43 (55.81%), Postives = 32/43 (74.42%), Query Frame = 0 
Query:   74 LRSACDNCSLKKIKCDG-EPTCQACRKRNVRCHYSIKRPTGPK 115
            LR++CD C+++KIKCDG E  CQ C + N  CHYS+K  +GPK
Sbjct:  421 LRTSCDRCTMRKIKCDGREGKCQRCDRDNQFCHYSLKSKSGPK 463
[Close]
BLAST of mRNA_F-serratus_M_contig833.19726.1 vs. uniprot
Match: A0A139A3M7_GONPJ (Zn(2)-C6 fungal-type domain-containing protein (Fragment) n=1 Tax=Gonapodya prolifera (strain JEL478) TaxID=1344416 RepID=A0A139A3M7_GONPJ)

HSP 1 Score: 50.1 bits (118), Expect = 3.570e-5
Identity = 17/33 (51.52%), Postives = 23/33 (69.70%), Query Frame = 0 
Query:   74 LRSACDNCSLKKIKCDGEPTCQACRKRNVRCHY 106
            +  ACD C  +K+KCDG+P C  C +RN +CHY
Sbjct:    1 MLQACDQCRARKLKCDGQPQCSRCTRRNTQCHY 33
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig833.19726.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5J936_9PHAE4.140e-1568.52Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A3M7GHS0_HORWE1.140e-552.83Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
D7FLU9_ECTSI1.170e-555.81C6 transcription factor Prf n=1 Tax=Ectocarpus sil... [more]
A0A139A3M7_GONPJ3.570e-551.52Zn(2)-C6 fungal-type domain-containing protein (Fr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001138Zn(2)-C6 fungal-type DNA-binding domainSMARTSM00066gal4_2coord: 72..115
e-value: 7.3E-8
score: 42.1
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPFAMPF00172Zn_cluscoord: 77..110
e-value: 4.2E-8
score: 33.2
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS00463ZN2_CY6_FUNGAL_1coord: 77..104
IPR001138Zn(2)-C6 fungal-type DNA-binding domainPROSITEPS50048ZN2_CY6_FUNGAL_2coord: 77..106
score: 9.798
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilyGENE3D4.10.240.10coord: 69..129
e-value: 1.6E-10
score: 42.8
IPR036864Zn(2)-C6 fungal-type DNA-binding domain superfamilySUPERFAMILY57701Zn2/Cys6 DNA-binding domaincoord: 71..111
NoneNo IPR availablePANTHERPTHR47663FAMILY NOT NAMEDcoord: 65..153
NoneNo IPR availablePANTHERPTHR47663:SF1coord: 65..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..116
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..139
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 140..205

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig833contigF-serratus_M_contig833:281952..291272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig833.19726.1mRNA_F-serratus_M_contig833.19726.1Fucus serratus malemRNAF-serratus_M_contig833 281888..291272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig833.19726.1 ID=prot_F-serratus_M_contig833.19726.1|Name=mRNA_F-serratus_M_contig833.19726.1|organism=Fucus serratus male|type=polypeptide|length=205bp
MLPQKTPTISAGALLPPKSKNGVADQVGDAVSVDEAPTKEKTNGDVQVTK
AESAVGDAAPTGGEAAGDADHNKLRSACDNCSLKKIKCDGEPTCQACRKR
NVRCHYSIKRPTGPKRAALAAAAVAAAAAAAAAASSSSIPSSSSPSPCNK
SANDNCTNDDSVSADVISCPRAGGKRLRGLTNGAVGCFGSGAGAGTVNGA
GVTAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001138Zn2-C6_fun-type_DNA-bd
IPR036864Zn2-C6_fun-type_DNA-bd_sf