prot_F-serratus_M_contig832.19716.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig832.19716.1
Unique Nameprot_F-serratus_M_contig832.19716.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length258
Homology
BLAST of mRNA_F-serratus_M_contig832.19716.1 vs. uniprot
Match: A0A6H5JPJ1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPJ1_9PHAE)

HSP 1 Score: 160 bits (406), Expect = 3.200e-41
Identity = 99/241 (41.08%), Postives = 143/241 (59.34%), Query Frame = 0
Query:    8 LEKLSERLADGVNARLKGIGQ----KIDFAAALARKCLLLSSKEDCDCPRLIWVEEDM-PNTAQPQSGRRYGHFRRV---RWLKR-GKTSTTR-FRVRFLCAHDYTPVACGADGNGYVLEQKDWQRWLLKCLPVLQLSLWALRVGVSFIARADVLPMDEMLATLKEIVGEEVAKKMEALDLRCASDGAGAMQSNLDRQVEVYGKAYKELAGLVKKEEGKIAEM---ARVVGSPMTGGKPSG 235
            L K  E +A   N +++ +GQ    K+D  AA+  KCLL+S ++D  CPRLI V ED+ P +A      R  HFRR    + L+R G+    + +R+RFLCA+D T   CG DG GY +E + WQ WL  CLPV+++SLW LRVG+S + RADVLP+D ++ TL+E+ GEE A  +  +DL         +   ++ Q +V+G AY ELA  V++ E KI +    A+  G+ + GG   G
Sbjct:  864 LRKGQEEMATSFNHQIQQLGQDMSRKLDCIAAVTSKCLLVSVEKDIPCPRLIMVLEDVSPGSALS----RLSHFRRDMVDKLLRREGEGPAPQCYRIRFLCAYDLTAGTCGKDGLGYKVEIQGWQEWLKACLPVIKVSLWLLRVGISVVTRADVLPVDGVIETLEEVAGEEAAGILGEIDLEGRRSSGQDLVDKVNAQEQVFGTAYAELAKWVQQREDKIGDGGDDAQTAGNTVGGGAADG 1100          
BLAST of mRNA_F-serratus_M_contig832.19716.1 vs. uniprot
Match: A0A6H5JSN1_9PHAE (Roc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSN1_9PHAE)

HSP 1 Score: 157 bits (396), Expect = 6.450e-40
Identity = 88/224 (39.29%), Postives = 140/224 (62.50%), Query Frame = 0
Query:    1 MNLKIEQLEKLSERLADGVNARLK-----------GIGQKIDFAAALARKCLLLSSKEDCDCPRLIWV-EEDMPNTAQPQSGRRYGHFRR--VRWLKRGKTSTTR-FRVRFLCAHDYTPVACGADGNGYVLEQKDWQRWLLKCLPVLQLSLWALRVGVSFIARADVLPMDEMLATLKEIVGEEVAKKMEALDLR--CASDGAGAMQSNLDRQVEVYGKAYKELA 207
            +N+K+E+L +  + +A GV   L+            +  ++D  AA+  +CLL+S+++D  CPRLI V E+D+P + Q     R  HFRR  +  L  GK  T + +R+RFLCA+D +   CG DG GY +E   W+ WL K +PV+Q++LW +RVGVS ++RAD+LP+D+++  L+E+ GEE A  +  +D+R  C+  G   +Q  +DR+ EV+G A+ +LA
Sbjct:  672 INVKVEELGQKLDDIAGGVEKHLRKGQEEMASLREDVSLQLDCIAAVTSECLLVSAEKDIPCPRLIMVSEDDVPESDQS----RLSHFRREMMDQLFLGKGQTPQHYRIRFLCAYDLSAATCGEDGLGYKVEIGSWKGWLQKYMPVIQVALWTVRVGVSVVSRADILPVDDVMGKLREVAGEEAATMIGEIDVRGHCSLSGQDLVQE-VDRKAEVFGSAFNKLA 890          
BLAST of mRNA_F-serratus_M_contig832.19716.1 vs. uniprot
Match: D8LKS5_ECTSI (LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKS5_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 2.330e-13
Identity = 58/187 (31.02%), Postives = 96/187 (51.34%), Query Frame = 0
Query:   36 LARKCLLLSSKEDCDCPRLIWVEEDMPNTAQPQSGRRYGHFRRVRWLKR-GKTSTTRFRVRFLCAHDYTPVACGADGNGYVLEQ-KDW-QRWLLKCLPVLQLSLWALRVGVSFIARADVLPMDEMLATLKEIVGEEVAKKMEALDLRCASDGA-----GAMQSNLDRQVEVYGKAYKELAGLVKKEE 214
            L  + LL +S E    PRL+ V  ++  TA+  +  R       RW K   +    +FRV FLC HD + V CG  G G+ ++  KDW ++WL    P++Q+SLW LRV V  ++  D LP++++L       G E+ + +  +  R +S        GA ++ +D   ++ GK+Y+ L   ++  E
Sbjct:  922 LLEQDLLPASDEQSAYPRLVLVRPEL-ETAEDMTHERIQRAGWDRWTKALSEMGFHKFRVHFLCGHDLSEVPCGPGGRGFPIKHPKDWVKQWL----PLMQVSLWMLRVAVGAVSNVD-LPLNKVLGAFVMATGAELLEGVGKVPDRISSAALPVFSEGATRAEMDGFKDLRGKSYEGLCKFMRDVE 1102          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig832.19716.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5JPJ1_9PHAE3.200e-4141.08Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JSN1_9PHAE6.450e-4039.29Roc domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LKS5_ECTSI2.330e-1331.02LRR-GTPase of the ROCO family n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig832contigF-serratus_M_contig832:33588..34959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig832.19716.1mRNA_F-serratus_M_contig832.19716.1Fucus serratus malemRNAF-serratus_M_contig832 33588..34959 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig832.19716.1 ID=prot_F-serratus_M_contig832.19716.1|Name=mRNA_F-serratus_M_contig832.19716.1|organism=Fucus serratus male|type=polypeptide|length=258bp
MNLKIEQLEKLSERLADGVNARLKGIGQKIDFAAALARKCLLLSSKEDCD
CPRLIWVEEDMPNTAQPQSGRRYGHFRRVRWLKRGKTSTTRFRVRFLCAH
DYTPVACGADGNGYVLEQKDWQRWLLKCLPVLQLSLWALRVGVSFIARAD
VLPMDEMLATLKEIVGEEVAKKMEALDLRCASDGAGAMQSNLDRQVEVYG
KAYKELAGLVKKEEGKIAEMARVVGSPMTGGKPSGITAPIAGNIALPGDQ
GHPARQST
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