mRNA_F-serratus_M_contig831.19711.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A6H5JGY9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGY9_9PHAE) HSP 1 Score: 122 bits (305), Expect = 6.800e-30 Identity = 59/92 (64.13%), Postives = 75/92 (81.52%), Query Frame = 3
Query: 369 FTTQVAARRNSRNRAAGTMETRMVDVTKAVYKEKMLNDVFPAIKRMWPGG-DRNVLVQQDNAPAHKIADDPDIVAAGTSDGWNIRLLNQPPN 641
FT Q AA+RNSRNRAAGTMET+ V+VTK V+K K++++VFPAIK WPGG R + +Q DN P+H+I DPD+VAAG +DGW+IRL+NQP N
Sbjct: 97 FTVQRAAQRNSRNRAAGTMETKCVEVTKEVFKRKVVDEVFPAIKARWPGGRGRTIYIQLDNKPSHRINADPDVVAAGIADGWDIRLINQPSN 188
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A6H5KWV2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWV2_9PHAE) HSP 1 Score: 106 bits (264), Expect = 5.710e-23 Identity = 49/89 (55.06%), Postives = 62/89 (69.66%), Query Frame = 2
Query: 101 LNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
L+WAL++VR G KF + + +DEK F+ K GQRYY EGE P+ +VQHKSH+ KVMFLAAV RPR D+ +R FDGKIGI+
Sbjct: 34 LSWALRWVRPSAGDAHKFHHFFDFLHLDEKWFYICKQGQRYYFYEGEHLPIRKVQHKSHVIKVMFLAAVARPRYDSSRSRQFDGKIGIY 122
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A6A4ZEB5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZEB5_9STRA) HSP 1 Score: 101 bits (252), Expect = 1.570e-21 Identity = 52/107 (48.60%), Postives = 67/107 (62.62%), Query Frame = 2
Query: 47 AASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
A S +LKP LTD+ RL +A+ F+R+G G + F M +IV VDEK F+ KN YY+ + E + VQ KSHI KVMFLAAV RPR D FDGK+G++
Sbjct: 149 AKSNWLKPRLTDANIKLRLEFAMSFLRSGPGDRQVFSDMHDIVHVDEKWFYLTKNKSVYYIYDDEVLAIRSVQSKSHITKVMFLAAVARPRYDFARREMFDGKLGVW 255
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: W4FXV7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FXV7_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 2.610e-21 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 2
Query: 41 LRAASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
L+A S ++KP+LT+ + R+ L+F+R GG R F+ M + V VDEK FF K +R+Y+ + EE + V+ K I KVMFLAAV RPR D + FDGKIGI+
Sbjct: 7 LKARSSYVKPLLTEVNMVARVEHCLRFLRVMPGGGRVFENMHDYVHVDEKWFFLTKVNRRFYVYDDEELALRSVKSKRFITKVMFLAAVARPRYDHHAKKEFDGKIGIW 115
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A485LER1_9STRA (Aste57867_19841 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LER1_9STRA) HSP 1 Score: 100 bits (249), Expect = 3.480e-21 Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 2
Query: 29 KKLGLRAASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
K+ L+ S +KP+LTD K RL +A F+R+G G F+ M N V VDEK FF + +++Y+ E E + V+ K I KVMFLAAV RPR D NR+FDGKIGI+
Sbjct: 136 KEKTLKGRSNRVKPLLTDDNKKARLKFAFNFLRSGLCGSHFFENMYNYVHVDEKWFFITQVNRKFYVYEDETVALRAVKSKRFITKVMFLAAVARPRHDAHRNRHFDGKIGIW 248
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A485LQU3_9STRA (Aste57867_24566 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LQU3_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 4.690e-21 Identity = 52/109 (47.71%), Postives = 65/109 (59.63%), Query Frame = 2
Query: 41 LRAASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
L+ S ++KP L D+ KI R+ +AL F+R G G FD M N V VDEK FFF K + +Y+ E EE + K I KVMFLAAV RPR D FDGK+GI+
Sbjct: 7 LKGRSSYVKPALMDANKIERVTFALGFLRPGPHGSHFFDDMYNRVHVDEKWFFFTKVKRTFYVYEDEELVHRAAKSKRFITKVMFLAAVARPRYDHHLKCTFDGKLGIW 115
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A485LKF5_9STRA (Aste57867_13079 protein n=2 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LKF5_9STRA) HSP 1 Score: 97.8 bits (242), Expect = 7.900e-21 Identity = 51/114 (44.74%), Postives = 68/114 (59.65%), Query Frame = 2
Query: 26 LKKLGLRAASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
+K+ L+A S + KP+L+D K R+ +A F+R G F PM V VDEK FF K +++Y+ E E + V++K I KVMFLAAV RPR D R FDGKIGI+
Sbjct: 1 MKESNLKAKSSYSKPMLSDDNKDDRMRFASSFLRPQSNGTHLFAPMHEYVHVDEKWFFLTKAKKKFYVYEDETLALRAVKNKKFITKVMFLAAVARPRYDPHRRREFDGKIGIW 114
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A6A3XBC6_9STRA (Uncharacterized protein n=2 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3XBC6_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.490e-20 Identity = 57/124 (45.97%), Postives = 77/124 (62.10%), Query Frame = 2
Query: 14 LQQNLKKLGLRAASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREG------EEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
+QQ +K+ +R A R +P+LT S ++ RL +A+ V+ G FDPM ++V +DEK F+ KK GQR Y+ G EEAPV VQ K HI+KVMFL AV RPR D +DGKIG++
Sbjct: 55 VQQLIKEGYMRRALRQTRPLLTASHRVARLKFAVNHVKLNGDGQYYFDPMFDVVHIDEKWFYVKKIGQRVYVLTGKDGTPLEEAPVQYVQSKRHIKKVMFLCAVARPRGD------WDGKIGLW 172
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: W4GCT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GCT3_9STRA) HSP 1 Score: 96.7 bits (239), Expect = 1.660e-20 Identity = 50/109 (45.87%), Postives = 69/109 (63.30%), Query Frame = 2
Query: 41 LRAASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
L+A S ++KP+LT+ + R+ L+F+R GG R F+ M + V VDEK FF K +R+Y+ + EE + V+ K I KVMFLAAV RPR D + FDGKIGI+
Sbjct: 7 LKARSSYVKPLLTEVNMVARVEHCLRFLRRMPGGGRVFENMHDYVHVDEKWFFLTKVKRRFYVYDDEELALRSVKSKRFITKVMFLAAVARPRYDHHTKKEFDGKIGIW 115
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Match: A0A6A4ZGT3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4ZGT3_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 2.330e-20 Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 2
Query: 41 LRAASRFLKPILTDSGKIRRLNWALQFVRTGHGGIRKFDPMENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGRPRRDTVNNRNFDGKIGIF 367
L+A S +++P+LTD+ K R+ +A F+R GG F M + V VDEK F+ K +RYY+ + EE +HKSHI K+MFLAAV RPR D FDGKIG++
Sbjct: 47 LKARSSYIRPMLTDANKRARIKFAASFLRPTSGGTT-FVNMHDYVHVDEKWFYLTKVKRRYYVYDDEEVAARACKHKSHITKIMFLAAVARPRYDPHTRSFFDGKIGVW 154 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig831.19711.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig831.19711.1 >prot_F-serratus_M_contig831.19711.1 ID=prot_F-serratus_M_contig831.19711.1|Name=mRNA_F-serratus_M_contig831.19711.1|organism=Fucus serratus male|type=polypeptide|length=160bp MENIVMVDEKCFFFKKNGQRYYLREGEEAPVSRVQHKSHIQKVMFLAAVGback to top mRNA from alignment at F-serratus_M_contig831:213142..213782+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig831.19711.1 ID=mRNA_F-serratus_M_contig831.19711.1|Name=mRNA_F-serratus_M_contig831.19711.1|organism=Fucus serratus male|type=mRNA|length=641bp|location=Sequence derived from alignment at F-serratus_M_contig831:213142..213782+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig831:213142..213782+ >mRNA_F-serratus_M_contig831.19711.1 ID=mRNA_F-serratus_M_contig831.19711.1|Name=mRNA_F-serratus_M_contig831.19711.1|organism=Fucus serratus male|type=CDS|length=960bp|location=Sequence derived from alignment at F-serratus_M_contig831:213142..213782+ (Fucus serratus male)back to top |