mRNA_F-serratus_M_contig830.19703.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig830.19703.1 vs. uniprot
Match: D8LMP3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMP3_ECTSI) HSP 1 Score: 247 bits (631), Expect = 1.470e-71 Identity = 270/297 (90.91%), Postives = 277/297 (93.27%), Query Frame = 3
Query: 789 RGDLESVQKYINTGGDLERMDWDNCTALHIACAGAFSQVAQLLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNPDVKDETGAKPGDMFHDGVGMSQRFEIKKLIRQRYRLMAEGFQNTRAAYVKVWLELERKNMDQAQSALEVELLWGQLDRREKELNMSKIGARDLGHAVKQLKTALETNRTTIREKN 1679
RGDLESVQKYI TGGDLERMDWDNCTALHIACAGAFSQVAQLL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX P + DETGAKPGD+FHDGVGMSQRFEIKKLIRQRY LMAEGF+NTRAAYVKVW++LERKNMDQAQSALEVELLWGQL+RREKELNMSK+GARDLGHAVKQLKTALETNRTTIREKN
Sbjct: 86 RGDLESVQKYIATGGDLERMDWDNCTALHIACAGAFSQVAQLLINKGANLNAKTRIEHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGLMDETGAKPGDVFHDGVGMSQRFEIKKLIRQRYNLMAEGFRNTRAAYVKVWMDLERKNMDQAQSALEVELLWGQLERREKELNMSKVGARDLGHAVKQLKTALETNRTTIREKN 382
BLAST of mRNA_F-serratus_M_contig830.19703.1 vs. uniprot
Match: D7FY56_ECTSI (Similar to ankyrin 2,3/unc44, partial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY56_ECTSI) HSP 1 Score: 87.8 bits (216), Expect = 2.450e-14 Identity = 47/107 (43.93%), Postives = 70/107 (65.42%), Query Frame = 3
Query: 1338 VKDETGAKPGDMFHDGVGMSQRFEIKKLIRQRYRLMAEGFQNTRAAYVKVWLELERKNMDQAQSALEVELLWGQLDRREKELNMSKIGARDLGHAVKQLKTALETNR 1658
V +E K G+ F V +Q+ +IK L+++R L+ +G++ R +++ ER +++ S EVE LWG+L +REKELNMSK+GARDL HAVK +K+ALE R
Sbjct: 206 VANEDNVKAGETFLPEVPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGR 312
BLAST of mRNA_F-serratus_M_contig830.19703.1 vs. uniprot
Match: A0A6H5JR84_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR84_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 3.950e-14 Identity = 46/107 (42.99%), Postives = 70/107 (65.42%), Query Frame = 3
Query: 1338 VKDETGAKPGDMFHDGVGMSQRFEIKKLIRQRYRLMAEGFQNTRAAYVKVWLELERKNMDQAQSALEVELLWGQLDRREKELNMSKIGARDLGHAVKQLKTALETNR 1658
V +E K G+ F + +Q+ +IK L+++R L+ +G++ R +++ ER +++ S EVE LWG+L +REKELNMSK+GARDL HAVK +K+ALE R
Sbjct: 206 VANEENVKAGETFLPEIPEAQQGQIKVLLKERQPLLMKGYEAARRNMALMYMRSERSDLNLRMSQGEVETLWGKLAKREKELNMSKMGARDLSHAVKAMKSALEQGR 312
BLAST of mRNA_F-serratus_M_contig830.19703.1 vs. uniprot
Match: A0A835YKV0_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKV0_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 3.810e-9 Identity = 32/59 (54.24%), Postives = 39/59 (66.10%), Query Frame = 3
Query: 1338 VKDETGAKPGDMFHDGVGMSQRFEIKKLIRQRYRLMAEGFQNTRAAYVKVWLELERKNM 1514
V D G KP + F D V ++ RFEIKKL+RQR LMAEG+ R YV +W E+E KNM
Sbjct: 80 VVDAAGTKPAETFSDKVPVASRFEIKKLVRQRPVLMAEGYSELRRRYVVMWKEVEAKNM 138 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig830.19703.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig830.19703.1 >prot_F-serratus_M_contig830.19703.1 ID=prot_F-serratus_M_contig830.19703.1|Name=mRNA_F-serratus_M_contig830.19703.1|organism=Fucus serratus male|type=polypeptide|length=366bp MSALAAPAGDAAGKGSGVDIHGAVERGDLESVQKYINTGGDLERMDWDNCback to top mRNA from alignment at F-serratus_M_contig830:179899..218278- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig830.19703.1 ID=mRNA_F-serratus_M_contig830.19703.1|Name=mRNA_F-serratus_M_contig830.19703.1|organism=Fucus serratus male|type=mRNA|length=38380bp|location=Sequence derived from alignment at F-serratus_M_contig830:179899..218278- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig830:179899..218278- >mRNA_F-serratus_M_contig830.19703.1 ID=mRNA_F-serratus_M_contig830.19703.1|Name=mRNA_F-serratus_M_contig830.19703.1|organism=Fucus serratus male|type=CDS|length=2196bp|location=Sequence derived from alignment at F-serratus_M_contig830:179899..218278- (Fucus serratus male)back to top |