prot_F-serratus_M_contig830.19702.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig830.19702.1
Unique Nameprot_F-serratus_M_contig830.19702.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length694
Homology
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE)

HSP 1 Score: 306 bits (783), Expect = 6.450e-86
Identity = 184/343 (53.64%), Postives = 222/343 (64.72%), Query Frame = 0
Query:  195 GRGGGRSNLYGSDPGTMGGGSARHHGRLVGTHAITGVFSSTGGVPRISLRRGHGVSPQAVKIKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAESGTDGGESD-GAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW---PPKAYEAHMAKPPTPSSRSRRXXXXXXXXXXXXXXXXXXXXXGSFGSEKDRPPPRSDATWSTA--------SSQSGVDSSAER--------LERWDSSTRLRHSSSDVSET 517
            G G GRSNLYGS PGT+G GSA+    L G  ++ G  S  GG       RGHG +P A KIKLLMLGDSGVGKSSLMDRF ED F+I+ + T+GVDFK K + +NDE+V +QVWDTAGQQ+FHKIT+AYYRGSHGIVLVYD+SDP+TLDN  YWM+SIR+ AGSN VQICL+GNKVDLRE  E G +  + D    V+T +GR +A++F AE+FECSAKTG  V EA+     KAYEAH+ KP TPS+R RR                      S GS++DRPP R DA+  TA        S    V+S AER                R+R  +S+VSET
Sbjct:  883 GGGNGRSNLYGSAPGTLGDGSAQREHGLRGCSSVQGFLSVGGGSQPYGAWRGHGGAPPARKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIFLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDISDPKTLDNTAYWMRSIRDTAGSNRVQICLIGNKVDLRE--EVGREEQQQDLSGMVETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEAHLVKPSTPSTRIRRRPGRKKHRRTA-----------SQGSDRDRPP-RGDASGPTAAIFSPSFASVPGAVESGAERPXXXXXXXXXXXXXXXRMRACASEVSET 1211          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: D8LMQ2_ECTSI (Rab8E, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ2_ECTSI)

HSP 1 Score: 287 bits (735), Expect = 9.220e-84
Identity = 171/306 (55.88%), Postives = 208/306 (67.97%), Query Frame = 0
Query:  230 GVFSSTGGVPRISLRRGHGVSPQAVKIKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAESGTDGGESDGA-FVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW---PPKAYEAHMAKPPTPSSRSRRXXXXXXXXXXXXXXXXXXXXXGSFGSEKDRPPPRSDATWSTASSQSG-------------VDSSAERLERWDS-STRLRHSSSDVSET 517
            G  S  GG      RRGHG +P A KIKLLMLGDSGVGKSSLMDRF ED F+I+ + T+GVDFK K +V+NDE+V +QVWDTAGQQ+FHKIT+AYYRGSHGIVLVYD+SDP+TLDN  YWM+SIR+ AGSN VQICLVGNKVDLRE  E G +G + D A  V+T +GR +A++F AE+FECSAKTG  V EA+     KAYEAH+ KP TPS+R RR                      S GS++DRPP RSDA+   A++ +              V+S AER    DS + R+R  +S+VSET
Sbjct:   28 GFLSVGGGSQPYGARRGHGGAPPARKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIVLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDMSDPKTLDNTAYWMRSIRDTAGSNRVQICLVGNKVDLRE--EVGLEGQQQDLAGMVETSTGRKVAEEFGAEYFECSAKTGCMVEEAFIATATKAYEAHLVKPSTPSTRIRRRLGRKKHRRTA-----------SQGSDRDRPP-RSDASGPAAATAAAATFSPSFASVPGVVESGAERPPPPDSPAARMRACASEVSET 319          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: A0A835YLY5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY5_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.250e-48
Identity = 100/191 (52.36%), Postives = 122/191 (63.87%), Query Frame = 0
Query:  255 KIKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAESGTD-----------------------GGESDGAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW 422
            K+K+LMLGD+GVGKSSLM+RFTED F    +GTVGVDFK + + +  E V+VQVWDTAGQ+RFHKITRAYYRGSHGI+L YDV +P TL+NI YW+ +I++NA S  V  CLVGNK+DLR +  +                                A V T SGR IA Q+   FFE SAKTG  V  A+
Sbjct:    2 KVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSG-VCTCLVGNKMDLRGETAAXXXXXXXXXXXXXXXXXXANPLSCCVSASPKAAPVGTDSGRAIAQQYGVAFFETSAKTGHNVHAAF 191          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: H6WB87_VAULI (Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB87_VAULI)

HSP 1 Score: 184 bits (467), Expect = 2.680e-47
Identity = 98/184 (53.26%), Postives = 125/184 (67.93%), Query Frame = 0
Query:  255 KIKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAES----------GTDGG------ESDGAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW 422
            KIK+LMLGD+GVGKSSL+ RFT+D F+   +GTVGVDFK + + +  E + VQVWDTAGQ+RFHKITRAYY G  GI+L YDV +P TL+NI YW+K+IR+NA S  V+ CLVGNK DL+ +A S             G       E     V+T SG+ IA+++   FFE SAKTG+ V EA+
Sbjct:  255 KIKILMLGDTGVGKSSLIQRFTDDTFHAGMVGTVGVDFKIRTMEVLGEKITVQVWDTAGQERFHKITRAYYHGCQGILLAYDVGEPGTLENISYWIKNIRDNA-SKDVRTCLVGNKADLKVRAISPYQLNWCVSASPQGSGRKRSWECPPVQVETESGQQIAEEYGVNFFEASAKTGYNVNEAF 437          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: F0WR77_9STRA (Rab8 family GTPase putative n=3 Tax=Albugo TaxID=65356 RepID=F0WR77_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.300e-40
Identity = 82/173 (47.40%), Postives = 112/173 (64.74%), Query Frame = 0
Query:  249 VSPQAVKIKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAESGTDGGESDGAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEA 421
            V P+  K+KLL+LGDSGVGK+SLM  F+ D+F+ S + T GVDFK + V I  +D+ +Q+WDTAGQ+RFH+IT  YY+G++GIVLVYDV+D    DN+ YWM +IR+ +  +   + LVGNK+DL  +A             V  C G  IA Q+   F E SAKT   + +A
Sbjct:  209 VPPKKHKLKLLLLGDSGVGKTSLMRVFSGDKFSDSMLATAGVDFKLRQVSIAGQDITLQIWDTAGQERFHRITATYYKGANGIVLVYDVTDKRGFDNVEYWMNNIRQFSSPHLPAMLLVGNKIDLSNRA-------------VPFCHGEAIAKQYSCRFIETSAKTSENINDA 368          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: D7FX24_ECTSI (Rab8C, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX24_ECTSI)

HSP 1 Score: 163 bits (413), Expect = 1.410e-40
Identity = 80/168 (47.62%), Postives = 115/168 (68.45%), Query Frame = 0
Query:  256 IKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNH-VQICLVGNKVDLREKAESGTDGGESDGAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW 422
            I++L+LGDSGVGK+SLM RF+ED+F  + I T GVD+K + + IN + V  Q+WDTAGQ+RFH ITR YYRG+HGI L YDV+D ++  N+ YWM +I+ +A   H +Q  ++GNKVD+ ++A             + T  G+ +A +F   FFE SAK G+GV++A+
Sbjct:  138 IRILLLGDSGVGKTSLMTRFSEDKFAPTLISTAGVDYKVQTLDINGKRVRCQIWDTAGQERFHVITRTYYRGAHGIALAYDVTDDDSFKNVNYWMANIQTHAEPGHRMQKMILGNKVDIEDRA-------------ISTKDGQDVAKEFGVRFFEVSAKNGYGVSDAF 292          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: A0A5B8MUA6_9CHLO (Small rab-related GTPase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MUA6_9CHLO)

HSP 1 Score: 156 bits (394), Expect = 3.440e-40
Identity = 80/167 (47.90%), Postives = 113/167 (67.66%), Query Frame = 0
Query:  256 IKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAESGTDGGESDGAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW 422
            IKLL++GDSGVGK+SL+ RF+ED F  S I T+G+DFK K V+I+++   +Q+WDTAGQ+RF  IT+AYYRG+ GI+LVYD +D ++ +N+  WMK+I +NA  N V   L+GNK D  ++A             + T  G  +A +F  +FFE SAKTG  V +A+
Sbjct:   12 IKLLVIGDSGVGKTSLLLRFSEDSFTTSFISTIGIDFKIKKVMIDEKCCKLQIWDTAGQERFRTITKAYYRGAMGIMLVYDTTDEKSFENVRNWMKNIEQNAAPN-VNKILIGNKSDSAKRA-------------ISTSMGEALAQEFGIQFFETSAKTGSYVEDAF 164          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: A0A836BQA0_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BQA0_9CHLO)

HSP 1 Score: 156 bits (395), Expect = 3.560e-40
Identity = 82/169 (48.52%), Postives = 111/169 (65.68%), Query Frame = 0
Query:  256 IKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQIC--LVGNKVDLREKAESGTDGGESDGAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW 422
            IKLL++GDSGVGKS L+ RFT+D F  S I T+G+DFK K V +  + V +Q+WDTAGQ+RF  IT AYYRG+ GI+LVYD+SD  + +N+  WM++I ++A  N  ++C  LVGNK+DL +           D   V T  G+ +AD+F   FFE SAK    V EA+
Sbjct:   11 IKLLLVGDSGVGKSCLLLRFTDDMFTSSFITTIGIDFKIKKVDVEGKLVKLQIWDTAGQERFRTITSAYYRGAQGIILVYDISDEASFNNVRNWMRNIEQHASDNVNKVCGILVGNKLDLGD-----------DKRVVSTARGQALADEFGFRFFETSAKDNVNVEEAF 168          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: UPI0009017E4D (ras-related protein RABE1c-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009017E4D)

HSP 1 Score: 155 bits (392), Expect = 7.580e-40
Identity = 79/167 (47.31%), Postives = 113/167 (67.66%), Query Frame = 0
Query:  256 IKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAESGTDGGESDGAFVQTCSGRMIADQFEAEFFECSAKTGFGVAEAW 422
            IKLL++GDSGVGKS L+ RF+ED F  S I T+G+DFK + + ++ + + +Q+WDTAGQ+RF  IT AYYRG+ GI+LVYDV+D  + DNI  WMK+I ++A S+ V   L+GNK D+ E  +            V T  G+ +AD++  +FFE SAKTG+ V + +
Sbjct:   11 IKLLLIGDSGVGKSCLLLRFSEDSFTQSYITTIGIDFKVRTIELDGKRMKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRNWMKNIEQHA-SDTVNKILIGNKADMDESKK-----------VVPTSRGQALADEYGVKFFETSAKTGYNVEQGF 165          
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Match: W4HEA2_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HEA2_9STRA)

HSP 1 Score: 161 bits (408), Expect = 3.960e-39
Identity = 83/183 (45.36%), Postives = 117/183 (63.93%), Query Frame = 0
Query:  233 SSTGGVPRISLRRGHGVSPQAVKIKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVINDE-DVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWMKSIRENAGSNHVQICLVGNKVDLREKAESGTDGGESDGAFVQTCSGRMIADQFEAEFFECSAKT 414
            +S+  +P  + R G     +  KIKLL+LGDSGVGK+SLM  F+ D F+ S + T GVDFK +++ + DE DV +Q+WDTAGQ+RFH+IT  YY+G++GI+LVYDV D    DN+ YWMK+I+E++ SN   + LVGNK+DL  +              + T  G+  AD +   + E SAKT
Sbjct:  284 ASSSAMPEYAGRPGDQAKRKPYKIKLLLLGDSGVGKTSLMRVFSGDEFSESMLATAGVDFKVRSLTLEDEYDVALQIWDTAGQERFHRITSTYYKGANGIILVYDVGDKRGFDNVGYWMKNIQEHSPSNMPAMLLVGNKIDLATRV-------------IVTEMGQAAADAYHCRYMETSAKT 453          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig830.19702.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KJK4_9PHAE6.450e-8653.64Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LMQ2_ECTSI9.220e-8455.88Rab8E, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A835YLY5_9STRA1.250e-4852.36P-loop containing nucleoside triphosphate hydrolas... [more]
H6WB87_VAULI2.680e-4753.26Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID... [more]
F0WR77_9STRA1.300e-4047.40Rab8 family GTPase putative n=3 Tax=Albugo TaxID=6... [more]
D7FX24_ECTSI1.410e-4047.62Rab8C, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A5B8MUA6_9CHLO3.440e-4047.90Small rab-related GTPase n=1 Tax=Chloropicon primu... [more]
A0A836BQA0_9CHLO3.560e-4048.52Uncharacterized protein n=2 Tax=Edaphochlamys deba... [more]
UPI0009017E4D7.580e-4047.31ras-related protein RABE1c-like n=2 Tax=Ipomoea Ta... [more]
W4HEA2_9STRA3.960e-3945.36Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 407..429
score: 33.05
coord: 256..277
score: 49.14
coord: 297..319
score: 39.37
coord: 279..295
score: 30.26
coord: 360..373
score: 50.38
NoneNo IPR availableSMARTSM00174rho_sub_3coord: 258..433
e-value: 3.0E-10
score: 12.2
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 256..432
e-value: 2.3E-54
score: 196.6
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 253..432
e-value: 5.9E-12
score: 51.2
NoneNo IPR availableGENE3D3.40.50.300coord: 250..473
e-value: 7.2E-56
score: 190.7
NoneNo IPR availablePANTHERPTHR24073:SF1022coord: 255..431
NoneNo IPR availablePANTHERPTHR24073FAMILY NOT NAMEDcoord: 255..431
NoneNo IPR availablePROSITEPS51419RABcoord: 251..483
score: 27.098
IPR001806Small GTPasePFAMPF00071Rascoord: 257..421
e-value: 6.9E-47
score: 159.0
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 255..390
e-value: 4.2E-24
score: 83.1
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 253..423

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig830contigF-serratus_M_contig830:138186..156363 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig830.19702.1mRNA_F-serratus_M_contig830.19702.1Fucus serratus malemRNAF-serratus_M_contig830 109322..156979 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig830.19702.1 ID=prot_F-serratus_M_contig830.19702.1|Name=mRNA_F-serratus_M_contig830.19702.1|organism=Fucus serratus male|type=polypeptide|length=694bp
MMACIDGDTPLRRRASSSSGTACDPIDFSSLRSGSGRSGEVSASELDAWN
RPRDNRSGLTASQAAAVTSAGVPRPGRGRGVGMPAPAAPAPEAPGDLAPS
PRARGDRSEVGAMVLEMPAPEAPGDLAPSPRARGDRSEIRVDNDNNAGSS
FSSLLSPPSQRQQHPASSGLARGGNSYGSGGSGGSGGSGGSGVMGRGGGR
SNLYGSDPGTMGGGSARHHGRLVGTHAITGVFSSTGGVPRISLRRGHGVS
PQAVKIKLLMLGDSGVGKSSLMDRFTEDRFNISTIGTVGVDFKAKAVVIN
DEDVVVQVWDTAGQQRFHKITRAYYRGSHGIVLVYDVSDPETLDNIVYWM
KSIRENAGSNHVQICLVGNKVDLREKAESGTDGGESDGAFVQTCSGRMIA
DQFEAEFFECSAKTGFGVAEAWPPKAYEAHMAKPPTPSSRSRRRLSRRKQ
NNQTQNLQNQHQRHGSFGSEKDRPPPRSDATWSTASSQSGVDSSAERLER
WDSSTRLRHSSSDVSETRRVWLPGNLLWGPSTYSSGHRSNAAGFCSSPTT
TTTSTTTHSSVGSPSAVPGSPPTQHQQPMLLLRPNPATPPPRGRNASGYI
TIRGELEPPLKAHYISFFTSLEAKGEKKSVCVSYQMDFFGVFSGCSIPPL
TSPHPPSPPTPHPHPFLPTLFPSARGLFRPFPYPAHNASSNRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase