prot_F-serratus_M_contig830.19706.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig830.19706.1
Unique Nameprot_F-serratus_M_contig830.19706.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1256
Homology
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BLAST of mRNA_F-serratus_M_contig830.19706.1 vs. uniprot
Match: D7G3I5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3I5_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 3.470e-23
Identity = 119/431 (27.61%), Postives = 184/431 (42.69%), Query Frame = 0 
Query:  477 PAPA---PEAIKASVPTPKRNTLES---QRMYPGGVELRSLHNFKVENRPAVTVAHALCGLMNPQTRPEFHFIG-DSEKGSGPFTVHVTVNGVNYSPGTGKTVKAAKFEASVNFIREVVGNRKQLDYGSFQAPPLPAAPAPSDADANL------------------------------------------------EQETVVKKEATTQSASYSPSFLKLLHDLVTALPATDSYTAFEWIDLVEQPTHAQQQPGDSAGDXXXXGATTNLEMEKDVKKECDVDGGSNGSSGPGEPSNETFGNICSENMGPRFRCVAKLKLR--MDEIEGGPKRSREMKAAKRILNMAEMA-LSSSPDDDEALERWKSAQDKMAALKNMPAARVDVLTVTKESSNKRDAKIEAARAMAYKLVPESENDDDLRVRVKAIIDEHR 849
            PAP    P+ +K   P   +  L+     RMYPGG  L ++ +FK++ + AV+ A  +C  M P++RP F     D+ K   PFT++V+VNGV YSP T K  K AK  AS+NF+RE VG R+QLD  S  A     + A S A A                                                    +  V K A         ++ +LLHDLV A P T +Y ++ +  L +   +A QQ                                                   S+  G  FRC A+L LR  +D +E   ++  E++AAK  + +A  A L   P+++   E  + A       + +P   + VL+   + +NKRDAK +AA+ + Y L+P+ + D+DLR + K +I++++
Sbjct:  818 PAPVVEPPKPMKEFPPGSGKMVLDELAHARMYPGGAVL-NMKSFKLKQKSAVSAAFEMCAAMEPKSRPSFENKNKDAAKNISPFTLNVSVNGVAYSPATAKNTKLAKQLASINFLREAVGTREQLDLESLIAETTGGSLAGSAAIAAAISQGKPATGXXXXXXXXXXXKGSRGXGGXXXXXXXXXXXXXXXXXXXDNDDDPVAKHALGDGLQ---NYAQLLHDLVAAHPETPNYASYMFRALKD---NASQQK--------------------------------------------------SKLTGKGFRCFARL-LRHVVDPVETAKRK--EVEAAKSAIEVAAKASLGEDPENEALKEAAREAHKDFLKHRAIPKLSIGVLSAEGDGANKRDAKHKAAQGLMYALMPKCKTDEDLRSQAKVVIEKYQ 1188
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig830.19706.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G3I5_ECTSI3.470e-2327.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 960..975
score: 42.75
coord: 1075..1089
score: 39.46
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 1026..1055
e-value: 14.0
score: 14.6
coord: 959..988
e-value: 0.012
score: 24.8
coord: 1059..1088
e-value: 0.0041
score: 26.3
coord: 1092..1126
e-value: 730.0
score: 6.0
coord: 926..955
e-value: 7.7E-4
score: 28.8
coord: 993..1022
e-value: 0.14
score: 21.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1059..1091
score: 13.09
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 926..958
score: 13.117
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1092..1129
score: 8.843
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 1026..1058
score: 10.446
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 959..991
score: 12.209
NoneNo IPR availablePFAMPF13637Ank_4coord: 929..977
e-value: 1.1E-8
score: 35.5
NoneNo IPR availableGENE3D3.30.160.20coord: 518..593
e-value: 7.9E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 1001..1069
NoneNo IPR availablePANTHERPTHR24134:SF1ANKYRIN REPEAT AND SOCS BOX PROTEIN 8coord: 902..1024
coord: 1001..1069
coord: 1030..1135
NoneNo IPR availablePANTHERPTHR24134FAMILY NOT NAMEDcoord: 902..1024
coord: 1030..1135
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 276..344
NoneNo IPR availableSUPERFAMILY54768dsRNA-binding domain-likecoord: 525..587
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1024..1160
e-value: 9.6E-29
score: 102.0
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 882..1023
e-value: 5.5E-30
score: 106.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 897..1139
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 1001..1090
e-value: 5.5E-12
score: 46.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 891..1129
score: 59.209
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 255..341
score: 9.295
IPR014720Double-stranded RNA-binding domainPROSITEPS50137DS_RBDcoord: 553..589
score: 9.611

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig830contigF-serratus_M_contig830:285111..326099 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig830.19706.1mRNA_F-serratus_M_contig830.19706.1Fucus serratus malemRNAF-serratus_M_contig830 283701..326150 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig830.19706.1 ID=prot_F-serratus_M_contig830.19706.1|Name=mRNA_F-serratus_M_contig830.19706.1|organism=Fucus serratus male|type=polypeptide|length=1256bp
MEGGNRPSGPWTGKMQPSHEQAQIQPATMQQFSPVPSFQVSTPQQHQRFV
GGVTAGQSPTAPQLPGFGRSFQQQTLTGVVAPSTPQPTGQMFISNNVAHL
PGSAPMGDVMHNQQNLQSPPPQQQQQQQSSPQMMRYPVQISHNQNGWQDP
RTRQHRRHNQPSHQQRQQQFQQPRPHQNHPQRFPQNQRHPKQQQQQQQRQ
VHHQREQAGDEAVEVLATATPAAAAKKSVGVGAAVRSQNKKGKQALRRDR
MAPGGASVELQKYHQPPQAEKWATSAAFEMCAKMAPPTRPAFTIHGGADK
KTPPFTVHVSVNGVGYSPATAQSVRIARQLASVNFVRELVGGRPTTIDIN
SLKTGVTLAVDHPAPPKATLHSQQQQQQQLHGFLPSAKVEIDEGTLACPA
SPASVPGDYSGGEEEEAGQEMDGRFVGEAGGETGTGGGKGDCGKRKLLEG
GGAQTKRMTPDATKLKMEMSALPDESPAPAPEAIKASVPTPKRNTLESQR
MYPGGVELRSLHNFKVENRPAVTVAHALCGLMNPQTRPEFHFIGDSEKGS
GPFTVHVTVNGVNYSPGTGKTVKAAKFEASVNFIREVVGNRKQLDYGSFQ
APPLPAAPAPSDADANLEQETVVKKEATTQSASYSPSFLKLLHDLVTALP
ATDSYTAFEWIDLVEQPTHAQQQPGDSAGDSTGDGATTNLEMEKDVKKEC
DVDGGSNGSSGPGEPSNETFGNICSENMGPRFRCVAKLKLRMDEIEGGPK
RSREMKAAKRILNMAEMALSSSPDDDEALERWKSAQDKMAALKNMPAARV
DVLTVTKESSNKRDAKIEAARAMAYKLVPESENDDDLRVRVKAIIDEHRE
DMGHSPLSHLSAEMTKTTDGEQDGTGGSGSTGGKQEKAGANGGWTMLMAT
LNNEGAEIDRLVAEGASVANQKKFWRGKTLLHLASERGCPDAAEALLRHG
AEVNSRDKQSRTPLHLAAERGHLAVVRARLAAGADVRPRHGDRDCSAMDE
AVCKGYVEIVEAIILAGADPDAGDCTRYRALHRAAYEGQAASVKALLDRG
VEIDPRDDDASTPVHFAAQQGSVNALLVLLEHGADPNAVDGNQDSPLHLA
GLYLDDPERLFEVVEALLRWGANENALNTERKRPIDLVMVPSVVTLLQRA
PSKRRDGRWQRRGLLVLCRSRVRPAVGDGDGGSSAAAAAAAAGVDKTTRS
AKLAKTESAVAGESSKRTISSVGNGKPAAADPGDALEWVVKVREEKIFRA
VVGFI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom
IPR014720dsRBD_dom