prot_F-serratus_M_contig83.19692.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig83.19692.1
Unique Nameprot_F-serratus_M_contig83.19692.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length118
Homology
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BLAST of mRNA_F-serratus_M_contig83.19692.1 vs. uniprot
Match: D8LIK8_ECTSI (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIK8_ECTSI)

HSP 1 Score: 91.3 bits (225), Expect = 5.210e-19
Identity = 49/71 (69.01%), Postives = 55/71 (77.46%), Query Frame = 0 
Query:   17 AEAFGSSCIEGVRLVVEWLGSVESVVRAMAVSTSWRDAVRPDADRLYKVIVRRAGVTPRRRAAFWEYLVLR 87
            AEAFGS C  GV LVVE+LGSVESV  AM VS+SW+ AV  D  RLYK IVRRAGVTP  RA FWE+++LR
Sbjct: 1267 AEAFGSRCPAGVCLVVEFLGSVESVPTAMLVSSSWKTAVLSDQQRLYKGIVRRAGVTPLWRAGFWEFMILR 1337
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BLAST of mRNA_F-serratus_M_contig83.19692.1 vs. uniprot
Match: A0A6H5L5V9_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5V9_9PHAE)

HSP 1 Score: 70.9 bits (172), Expect = 7.400e-12
Identity = 49/110 (44.55%), Postives = 55/110 (50.00%), Query Frame = 0 
Query:   17 AEAFGSSCIEGVRLVVEWLGSVES--------------------------------------VVRAMAVSTSWRDAVRPDADRLYKVIVRRAGVTPRRRAAFWEYLVLRR 88
            AEAFG  C  GV LVVE+LGSVES                                      V RA+ VS SW+ AV  D  RLYK IVRRAGVTP  RA FWE+++LRR
Sbjct: 1514 AEAFGWRCPAGVCLVVEFLGSVESLPLGTHAIIILTIAAHLLTCIRDAYVCVCTRVKPRVQSVPRAVLVSCSWKAAVLSDQQRLYKGIVRRAGVTPLWRAGFWEFMILRR 1623
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig83.19692.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LIK8_ECTSI5.210e-1969.01Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5L5V9_9PHAE7.400e-1244.55Rab-GAP TBC domain-containing protein n=1 Tax=Ecto... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig83contigF-serratus_M_contig83:556522..558249 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig83.19692.1mRNA_F-serratus_M_contig83.19692.1Fucus serratus malemRNAF-serratus_M_contig83 556522..558249 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig83.19692.1 ID=prot_F-serratus_M_contig83.19692.1|Name=mRNA_F-serratus_M_contig83.19692.1|organism=Fucus serratus male|type=polypeptide|length=118bp
MERRAVGDVGGEHQAVAEAFGSSCIEGVRLVVEWLGSVESVVRAMAVSTS
WRDAVRPDADRLYKVIVRRAGVTPRRRAAFWEYLVLRRPPRPRQQAGDST
DPLRSLCTSSPWSSPSSS
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