mRNA_F-serratus_M_contig8295.19680.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: D7G798_ECTSI (MFS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G798_ECTSI) HSP 1 Score: 301 bits (772), Expect = 4.670e-98 Identity = 146/193 (75.65%), Postives = 173/193 (89.64%), Query Frame = 1
Query: 4 AETVKEKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
AE V+++VVVT L++AVL AVLL+FLVGFNIGVMNAPE VVFPGHTTTEW+ AVS+FAIGGPFGA+LAGTVSN GRR AI VNTW+Y++GG++F LAP+++WL+ ARF++GFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALV GILGSNL+AFPL+ GWR+MFA+TP LA V+LVC+P +LES R
Sbjct: 91 AEGVEDEVVVTWPLVTAVLVAVLLEFLVGFNIGVMNAPEEVVFPGHTTTEWSLAVSVFAIGGPFGAILAGTVSNRNGRRGAIIVNTWMYLIGGLLFALAPTVLWLVPARFMIGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVIGILGSNLLAFPLATPSGWRWMFAVTPFLALVELVCIPFILESLR 283
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: I2CP18_NANGC (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP18_NANGC) HSP 1 Score: 241 bits (615), Expect = 2.500e-73 Identity = 116/194 (59.79%), Postives = 157/194 (80.93%), Query Frame = 1
Query: 1 MAETVKEKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
+A+ ++V+VT L AV AV+ +FLVG+N +MNAPE+VVFPGHTT EW+ AVS FAIGGP GA+L G ++N +GRR A+ +N ++++GG++ APSI WLI ARF++G A GF+SV+VPIYLGELAPPTLRGTLGT+TQF+LVTGIL S+++A+PL+ A+GWR++FA+T +LA + L+C P LLESPR
Sbjct: 97 LADVDVDQVIVTAPLAFAVFIAVIAEFLVGYNTSLMNAPEAVVFPGHTTAEWSLAVSAFAIGGPGGAILGGILANKRGRRGALLINALIFLVGGIILAGAPSIFWLIPARFIIGLASGFASVLVPIYLGELAPPTLRGTLGTLTQFSLVTGILVSDVLAYPLATAQGWRFLFAVTALLACLQLLCSPFLLESPR 290
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A835ZG82_9STRA (Solute carrier family facilitated glucose transporter member 3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG82_9STRA) HSP 1 Score: 237 bits (604), Expect = 4.920e-72 Identity = 113/188 (60.11%), Postives = 150/188 (79.79%), Query Frame = 1
Query: 19 EKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
++VV+T L++A++ AV+L FLVG+N GVMNA E VVFPGH+ TEW+ AV++FA+GGPFGA+LAG VSN +GR AAI N WL++ GG T+APSI W+I R LVGFA G++SV+VPIYLGELAPPTLRGTLGT+TQF++V GIL SNL++FPL++ GWR + +T +L+ L+ P ++ESPR
Sbjct: 103 DEVVLTTPLMAAIMVAVMLMFLVGYNTGVMNAVEPVVFPGHSVTEWSLAVAVFAVGGPFGAVLAGKVSNLQGRSAAIKGNMWLFLAGGAALTIAPSIYWIIAGRVLVGFASGYASVIVPIYLGELAPPTLRGTLGTLTQFSMVIGILASNLLSFPLADESGWRMLLGVTAVLSLCQLMASPFIVESPR 290
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A7S2LUB4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LUB4_9STRA) HSP 1 Score: 224 bits (570), Expect = 2.020e-69 Identity = 108/194 (55.67%), Postives = 151/194 (77.84%), Query Frame = 1
Query: 1 MAETVKEKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
M E + V+VT LI A+ A L QFLVG+N GVMN+P SVVF GH+T EW+ AVS+FAIGGP+GA+ AGT+ + +GRR A+ + + +++GG++ T A +++++ +ARF++GFA GFSSV+VPIYLGELAPPTLRGTLGT+TQF LVTGI S+L+AFP + KGWR +F++T + + + ++C P L+ESPR
Sbjct: 146 MDELEMDAVLVTTPLIIAIFVAGLCQFLVGYNTGVMNSPSSVVFSGHSTLEWSIAVSVFAIGGPWGAVAAGTLVDTRGRRGAMAICIYTFLIGGIIQTTAKNMIFITVARFIIGFASGFSSVLVPIYLGELAPPTLRGTLGTLTQFCLVTGIFVSDLLAFPFATEKGWRILFSVTAVASVIQILCFPFLIESPR 339
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A7S3PYK8_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYK8_9STRA) HSP 1 Score: 230 bits (586), Expect = 2.650e-69 Identity = 114/194 (58.76%), Postives = 150/194 (77.32%), Query Frame = 1
Query: 1 MAETVKEKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
M E +KV+VT LI AVL A + QFLVG+NIGVMNAPE VVFPGHTT EW+ AV+ F GGPFGA AGT++ +GRR A+ + TW ++LGG++ T AP+++ +I++R ++G A G S+V+VPIYLGELAPPTLRGTLGTMTQFA+V GIL ++LIAFP + + WR +F++ M+A + L+C P LLESPR
Sbjct: 46 MDELELDKVMVTTPLIFAVLVATVGQFLVGYNIGVMNAPEKVVFPGHTTGEWSIAVAAFCFGGPFGAYFAGTLAETRGRRGALLICTWTFLLGGLIQTTAPNMLAIIISRLIIGLASGISTVIVPIYLGELAPPTLRGTLGTMTQFAMVVGILMADLIAFPFATLEKWRMLFSVNLMMAFLQLLCAPWLLESPR 239
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A7S3PYA3_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYA3_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.100e-67 Identity = 114/194 (58.76%), Postives = 150/194 (77.32%), Query Frame = 1
Query: 1 MAETVKEKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
M E +KV+VT LI AVL A + QFLVG+NIGVMNAPE VVFPGHTT EW+ AV+ F GGPFGA AGT++ +GRR A+ + TW ++LGG++ T AP+++ +I++R ++G A G S+V+VPIYLGELAPPTLRGTLGTMTQFA+V GIL ++LIAFP + + WR +F++ M+A + L+C P LLESPR
Sbjct: 263 MDELELDKVMVTTPLIFAVLVATVGQFLVGYNIGVMNAPEKVVFPGHTTGEWSIAVAAFCFGGPFGAYFAGTLAETRGRRGALLICTWTFLLGGLIQTTAPNMLAIIISRLIIGLASGISTVIVPIYLGELAPPTLRGTLGTMTQFAMVVGILMADLIAFPFATLEKWRMLFSVNLMMAFLQLLCAPWLLESPR 456
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A7S4RLE4_9STRA (Hypothetical protein n=6 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RLE4_9STRA) HSP 1 Score: 226 bits (576), Expect = 5.540e-67 Identity = 108/188 (57.45%), Postives = 150/188 (79.79%), Query Frame = 1
Query: 19 EKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
+ V+VT LI AV+ A ++QF+VG+N GVMNAP SVVFPGH+T WA AV+ FA+GGPFGAM+AG +++++GRR A+ ++TW+++LGG++ TLA + +I+ARF++GF GF+SV+VPIYLGELAPP LRG GT+TQFA+V GIL S+ AFP + + WRY+F++TP+ AA+ L+ P LLESPR
Sbjct: 165 DAVMVTSPLIIAVVMASMVQFMVGYNTGVMNAPASVVFPGHSTGSWAIAVAAFAVGGPFGAMMAGKLADSRGRRGALLIDTWIFLLGGLLQTLAIDMYSIIIARFIIGFGSGFASVLVPIYLGELAPPNLRGMFGTLTQFAMVIGILVSDFFAFPFATEEKWRYLFSITPITAALLLLFSPFLLESPR 352
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A7S2KYN2_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KYN2_9STRA) HSP 1 Score: 224 bits (570), Expect = 1.930e-66 Identity = 107/188 (56.91%), Postives = 146/188 (77.66%), Query Frame = 1
Query: 19 EKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
++ VVT LI AV A + QFLVG+N GVMNAP +VVFP H+T W+ AV+ FAIGGPFG+ +AG++++++GRR A+ +NTW ++LGG++ T A + +I++R ++GFA GFSSV+VPIYLGEL+PPTLRG LGT+TQFALV GIL S+ ++FPL+ WRY+F +T + AA L+C P LLESPR
Sbjct: 144 DRTVVTTPLIFAVFVAAMAQFLVGYNTGVMNAPSNVVFPDHSTASWSIAVAAFAIGGPFGSNIAGSLADSRGRRGALLINTWTFLLGGLVQTFALDMFSIIVSRLIIGFASGFSSVLVPIYLGELSPPTLRGMLGTLTQFALVIGILISDFLSFPLATESNWRYLFFVTALTAAFQLLCAPFLLESPR 331
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A7S4J4S9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J4S9_9STRA) HSP 1 Score: 220 bits (560), Expect = 3.940e-66 Identity = 108/184 (58.70%), Postives = 141/184 (76.63%), Query Frame = 1
Query: 31 VTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
VT LI AV+ A + FLVG+N GVMNAP SVVFP H+T W+ AV+ FA+GGPFGA +AG +++ +GRR A+ +NT+L++LGG++ T A + ++++RF++G A G SSV+VPIYLGELAPPTLRGTLGTMTQFALV GIL SNL+ FP + WR++FA+TP A V L+ P LLESPR
Sbjct: 1 VTTPLIFAVIVAAMSMFLVGYNTGVMNAPSSVVFPAHSTATWSMAVAAFAVGGPFGAYVAGNLADTRGRRGALLINTYLFLLGGLIQTFAIDMTTIVVSRFVIGVASGSSSVLVPIYLGELAPPTLRGTLGTMTQFALVIGILVSNLLGFPFATEDRWRFLFAVTPFFALVQLLLSPFLLESPR 184
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Match: A0A7S4RK18_9STRA (Hypothetical protein (Fragment) n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RK18_9STRA) HSP 1 Score: 221 bits (562), Expect = 3.030e-65 Identity = 108/188 (57.45%), Postives = 146/188 (77.66%), Query Frame = 1
Query: 19 EKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTEWATAVSIFAIGGPFGAMLAGTVSNAKGRRAAITVNTWLYILGGMMFTLAPSIMWLILARFLVGFACGFSSVVVPIYLGELAPPTLRGTLGTMTQFALVTGILGSNLIAFPLSNAKGWRYMFALTPMLAAVDLVCLPLLLESPR 582
+ V+VT LI AV A +LQFL+G+NIGVMNAP SVVFPGH++ WA AV+ FAIGGPFGAM AG +++++GR+ A ++ W++++GG++ TLA + +I ARF+VGF GF SV+VPIYLGELAPP LRG GT+TQFALV GIL S+L+AFP + + WRY+F++TP+ + + L+ P LLESPR
Sbjct: 193 DAVMVTSPLIIAVAMASMLQFLLGYNIGVMNAPASVVFPGHSSGSWALAVAAFAIGGPFGAMAAGKLADSQGRKGAFLIDMWIFLVGGLLQTLAIDMYMIIAARFIVGFGSGFCSVLVPIYLGELAPPNLRGMFGTLTQFALVIGILASDLVAFPFATEEKWRYLFSITPITSMLLLLFSPFLLESPR 380 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig8295.19680.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig8295.19680.1 >prot_F-serratus_M_contig8295.19680.1 ID=prot_F-serratus_M_contig8295.19680.1|Name=mRNA_F-serratus_M_contig8295.19680.1|organism=Fucus serratus male|type=polypeptide|length=195bp MAETVKEKVVVTGSLISAVLAAVLLQFLVGFNIGVMNAPESVVFPGHTTTback to top mRNA from alignment at F-serratus_M_contig8295:395..2148- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig8295.19680.1 ID=mRNA_F-serratus_M_contig8295.19680.1|Name=mRNA_F-serratus_M_contig8295.19680.1|organism=Fucus serratus male|type=mRNA|length=1754bp|location=Sequence derived from alignment at F-serratus_M_contig8295:395..2148- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig8295:395..2148- >mRNA_F-serratus_M_contig8295.19680.1 ID=mRNA_F-serratus_M_contig8295.19680.1|Name=mRNA_F-serratus_M_contig8295.19680.1|organism=Fucus serratus male|type=CDS|length=1170bp|location=Sequence derived from alignment at F-serratus_M_contig8295:395..2148- (Fucus serratus male)back to top |