mRNA_F-serratus_M_contig828.19675.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 286 bits (732), Expect = 2.550e-82 Identity = 174/493 (35.29%), Postives = 268/493 (54.36%), Query Frame = 1
Query: 31 WRKAEETEMLGMVKNCVYDQV-AWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIP-------EKFQEFPGAV--------------------------KADPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
W +A E G + + V P+ + + +K + ++ K++ +K RLVA+GF Q+ +V Y +SP PS+ASI+++LA A K L H+D +QA+ A +DEE+ +++P K + A+ KADPCVFRK+VD M++V+++DDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++IPA GA K ++ + E +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T++ GITY +G GL + Y D+ + A + RRSVSG +S S+ Q + + ++EA+Y+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHID H +R + + V +V + +QHADLLTK L
Sbjct: 752 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRY-----HFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1229
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE) HSP 1 Score: 286 bits (732), Expect = 8.550e-82 Identity = 174/493 (35.29%), Postives = 268/493 (54.36%), Query Frame = 1
Query: 31 WRKAEETEMLGMVKNCVYDQV-AWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIP-------EKFQEFPGAV--------------------------KADPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
W +A E G + + V P+ + + +K + ++ K++ +K RLVA+GF Q+ +V Y +SP PS+ASI+++LA A K L H+D +QA+ A +DEE+ +++P K + A+ KADPCVFRK+VD M++V+++DDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++IPA GA K ++ + E +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T++ GITY +G GL + Y D+ + A + RRSVSG +S S+ Q + + ++EA+Y+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHID H +R + + V +V + +QHADLLTK L
Sbjct: 1131 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRY-----HFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1608
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE) HSP 1 Score: 286 bits (732), Expect = 8.930e-82 Identity = 174/493 (35.29%), Postives = 268/493 (54.36%), Query Frame = 1
Query: 31 WRKAEETEMLGMVKNCVYDQV-AWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIP-------EKFQEFPGAV--------------------------KADPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
W +A E G + + V P+ + + +K + ++ K++ +K RLVA+GF Q+ +V Y +SP PS+ASI+++LA A K L H+D +QA+ A +DEE+ +++P K + A+ KADPCVFRK+VD M++V+++DDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++IPA GA K ++ + E +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T++ GITY +G GL + Y D+ + A + RRSVSG +S S+ Q + + ++EA+Y+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHID H +R + + V +V + +QHADLLTK L
Sbjct: 1151 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRY-----HFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1628
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE) HSP 1 Score: 286 bits (732), Expect = 9.200e-82 Identity = 174/493 (35.29%), Postives = 268/493 (54.36%), Query Frame = 1
Query: 31 WRKAEETEMLGMVKNCVYDQV-AWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIP-------EKFQEFPGAV--------------------------KADPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
W +A E G + + V P+ + + +K + ++ K++ +K RLVA+GF Q+ +V Y +SP PS+ASI+++LA A K L H+D +QA+ A +DEE+ +++P K + A+ KADPCVFRK+VD M++V+++DDIL D+ + A L +KF K++G+ +++ GC I R+ + L+ Q Y++SMV+RFDVK ++IPA GA K ++ + E +P REA+G++MW +T +RPD++ AVRAVAR P H A+ KI YL T++ GITY +G GL + Y D+ + A + RRSVSG +S S+ Q + + ++EA+Y+A E VK+ LF+R V F+ P ++ V EDN+GAI L N +S RTKHID H +R + + V +V + +QHADLLTK L
Sbjct: 1294 WEQAMREEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVARGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDE-DCEELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDEEGGE-------WPVREAIGSMMWVSTFSRPDVSFAVRAVARHAHAPAKRHWDAIQKILGYLKGTRDLGITYQ-RGSGLGLAVYVDASY-ADTEDRRSVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVLSFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRY-----HFIRGLFRSGDISVKFVPTTEQHADLLTKAL 1771
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA) HSP 1 Score: 272 bits (695), Expect = 2.970e-81 Identity = 172/513 (33.53%), Postives = 271/513 (52.83%), Query Frame = 1
Query: 1 QAMESHEWDEWRKAEETEMLGMVKNCVYDQVAWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIPEKFQEFPGAVKA------------------------------------------DPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
+A H+ DEW+KA +E+ ++ N + V P + IG + ++ + +V +YK RLVA+G+ Q + Y E SP S+R +LA A+ E+ D + AFL +++EEI +E+PE +E +A DPCV+ + +GE E +V +++DD+L ++ +A + A + +KF++KD+G A + +G I + + R L Q Y ES++K+F + K P G +K DEPQ E+K +MK PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A +K+ +YLL TK+ GI Y G G +AY+D+D+ D RRSVSG +LM + W S Q A ++EA+Y+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N RTKHID H +R+ + V + YV +++Q A +TK L
Sbjct: 71 EATTRHDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRG-EGEGECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRY-----HFIREKVVSSEVELEYVDTKNQLAYFMTKGL 574
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6A3Q8N8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q8N8_9STRA) HSP 1 Score: 270 bits (689), Expect = 4.910e-80 Identity = 171/505 (33.86%), Postives = 265/505 (52.48%), Query Frame = 1
Query: 25 DEWRKAEETEMLGMVKNCVYDQVAWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIPEKFQEFPGAVKA------------------------------------------DPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
DEW KA +E+ +V N + V P + IG + ++ + + +YK RLVA+G+ Q D+ Y E SP SIR +L +A+ E+ D + AFL ++EEI +E+PE +E +A DPCV+ + +GE E +V +++D++L ++ +A + A + +KF++KD+G A + +G I N + R L Q Y ES++K F + K P G +K DEPQ E+K +MK PYR VG+LM+ A TRPD++ AV ++RF ENPG H + +K +YLL TK+ GI Y GQ G ++AY+D+D+ D RRSVSG +LM + W S Q A ++EA+Y+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N RTKHID H +R+ V + YV +++Q AD +TK L
Sbjct: 112 DEWMKAIASELESLVANKTWKLVPKPVHQRPIGCRWVFALKRDEKRQAVRYKARLVAKGYSQRHDIDYEETYSPVAYLNSIRAMLVKCSAEGMEIERCDFDTAFLYGKLEEEIYMELPEGLRELLELAEAQGEDDVVCMLLQSLYGLKHASRVWNDTIDKHLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDNMLIASRQKAVITSVKAGIAEKFRIKDLGRARFILGIEIDYNMERRTLGISQKAYTESIIKTFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSVVGSLMYLACGTRPDVSVAVAKLSRFLENPGEKHWDSGIKAVRYLLKTKDVGIVYDGQ-LGTHLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATEIYEDNQGAMALAKNVGYQARTKHIDIRY-----HFIREKVVGNEVELEYVDTKNQLADFMTKGL 607
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA) HSP 1 Score: 269 bits (687), Expect = 1.970e-79 Identity = 171/505 (33.86%), Postives = 269/505 (53.27%), Query Frame = 1
Query: 25 DEWRKAEETEMLGMVKNCVYDQVAWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIPEKFQEFPGAVKA------------------------------------------DPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
DEW+KA +E+ ++ N + V P + IG + ++ + +V +YK RLVA+G+ Q + Y E SP SIR +LA +A+ E+ D + AFL ++EEI +E+ E +E +A DPCV+ + +GE E +V +++DD+L ++ +A + A + +KF++KDMG A + +G I + + R L Q Y ES++K+F + K P G +K DEPQ E+K +MK PYR VG+LM+ + TRPDI+ AV ++RF ENPG H A +K+ +YLL TK+ GI Y G G ++AY+D+D+ D RRSVSG +LM + W S Q A ++EA+Y+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N TKHID H +RD + + V++ YV +++Q AD +TK L
Sbjct: 144 DEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLIKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRY-----HFIRDKAVSNEVKLEYVDTKNQLADFMTKGL 639
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA) HSP 1 Score: 273 bits (699), Expect = 4.190e-79 Identity = 172/505 (34.06%), Postives = 271/505 (53.66%), Query Frame = 1
Query: 25 DEWRKAEETEMLGMVKNCVYDQVAWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIPEKFQEFPGAVKA------------------------------------------DPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
DEW+KA +E+ ++ N + V P + IG + ++ + +V +YK RLVA+G+ Q + Y E SP SIR +L +A+ E+ D + AFL ++ EI +E+PE+ +E +A DPCV+ + +GE E +V +++DD+L ++ A + A + +KF++KDMG A + +G I + + R L Q Y ES++K+F + K P G +K DEPQ E+K +MK+ PYR VG+LM+ A TRPDI+ AV ++RF ENPG H A +K+ +YLL TK+ GI Y G G ++AY+D+D+ D RRSVSG +LM + + W S Q A ++EA+Y+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N RTKHID H VR+ + + V++ YV +++Q AD +TK L
Sbjct: 410 DEWKKAIASELESLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRG-EGEDECIVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHIDIRY-----HFVREKAVSNEVKLEYVDTKNQLADFMTKGL 905
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE) HSP 1 Score: 261 bits (668), Expect = 4.830e-79 Identity = 155/426 (36.38%), Postives = 234/426 (54.93%), Query Frame = 1
Query: 232 EKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIPEKFQEFPGAV---------------------------------KADPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYG-GQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
E +PT + +S+R+L A A ++ LRHFD +QAF+++D+DE++ + +PE G + AD CVFR + +G + +VVH+DDI + +++ D+F +L +K++GD +Y GC R+ LK Q Y E + F V+ +IP G S+ D + +E+ +P+RE +G+LMW AT TRPDIA AVRAVAR+C +P H +A + I Y++ T + GIT+ G GL M+ + D+D+ + RRSVSG ++M G ISW SR Q T+EA+YV+L++V+K+VLFLRQV FM P + + VFEDN+GAI+LA N ++ +KHID H +R+ + + + +V S QHAD LTK L
Sbjct: 10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGL-KLSEFD------QDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQKCVTLSTTEAEYVSLADVMKEVLFLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRH-----HFIRELVGRKEISIFHVESAYQHADFLTKAL 422
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Match: A0A6G0QQ26_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ26_9STRA) HSP 1 Score: 268 bits (685), Expect = 3.060e-77 Identity = 171/505 (33.86%), Postives = 269/505 (53.27%), Query Frame = 1
Query: 25 DEWRKAEETEMLGMVKNCVYDQVAWPKDKLVIGTKMLYKRNIGQDSKVEKYKCRLVAQGFWQVEDVHYTEKNSPTPSAASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEICIEIPEKFQEFPGAVKA------------------------------------------DPCVFRKVVDGEAEMVVVVHLDDILAHAKDQATMDRFAAELGQKFKLKDMGDAEYYMGCHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGAPTFSKVDEPQNPEEKKEMKMFPYREAVGALMWTATMTRPDIACAVRAVARFCENPGPAHKKAVMKIFQYLLHTKE*GITYGGQGCGLCMDAYTDSDFGACLDTRRSVSGAVLMFVKGAISWHSRMQGVTAAGTSEAKYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDXXXXXXXXHLVRDASDAQRVRVAYVRSEDQHADLLTKPL 1407
DEW+KA +E+ ++ N + V P + IG + ++ + +V +YK RLVA+G+ Q ++Y E SP SIR +LA +A+ E+ D + AFL ++EEI +E+ E +E +A DPCV+ + +GE E +V +++DD+L ++ +A + A + +KF++KDMG A + +G I N + R L Q Y ES++K+ + K P G +K DEPQ E+K +MK PYR VG+LM+ + TRPDI+ AV ++RF ENPG H A +K+ +YLL TK+ GI Y G G ++AY+D+D+ D RRSVSG +LM + W S Q A ++EA+Y+ALS+ VK+ +++R++ + + +VGA ++EDN+GA+ LA N TKHID H +RD + + V++ YV +++Q AD +TK L
Sbjct: 388 DEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKDRLVAKGYSQRHGINYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRG-EGEDECIVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYNMERRTLGISQKAYTESIIKKVGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHIDIRY-----HFIRDKAVSNEVKLEYVDTKNQLADFMTKGL 883 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig828.19675.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig828.19675.1 >prot_F-serratus_M_contig828.19675.1 ID=prot_F-serratus_M_contig828.19675.1|Name=mRNA_F-serratus_M_contig828.19675.1|organism=Fucus serratus male|type=polypeptide|length=311bp MESHEWDEWRKAEETEMLGMVKNCVYDQVAWPKDKLVIGTKMLYKRNIGQback to top mRNA from alignment at F-serratus_M_contig828:72051..73556+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig828.19675.1 ID=mRNA_F-serratus_M_contig828.19675.1|Name=mRNA_F-serratus_M_contig828.19675.1|organism=Fucus serratus male|type=mRNA|length=1506bp|location=Sequence derived from alignment at F-serratus_M_contig828:72051..73556+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig828:72051..73556+ >mRNA_F-serratus_M_contig828.19675.1 ID=mRNA_F-serratus_M_contig828.19675.1|Name=mRNA_F-serratus_M_contig828.19675.1|organism=Fucus serratus male|type=CDS|length=1866bp|location=Sequence derived from alignment at F-serratus_M_contig828:72051..73556+ (Fucus serratus male)back to top |