mRNA_F-serratus_M_contig826.19663.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig826.19663.1
Unique NamemRNA_F-serratus_M_contig826.19663.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A6H5JL95_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL95_9PHAE)

HSP 1 Score: 268 bits (686), Expect = 3.610e-82
Identity = 146/266 (54.89%), Postives = 177/266 (66.54%), Query Frame = 1 
Query:  106 KSVTVHRANLSGARHWMNRRPVAMRRHS-GGS----------AHPPSKGS----KPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLSEEIQHDVGSVATAPSKN---TFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKA 849
            K   V    L GARH         RR   GGS          A PP  G+    KP++ S+FS+Y     +LLESRPLATKAVTSG IAFAGD++CQ+L  + AK+E+     QH        P  +   T   +E+DWGR  RFT +G   VAP LH WYGFL+R+LPGT  +T+VKRV+LDQL+FAP FLA FL+++M+ DGNAA++  KLRA Y TT+VSNWGYWIPAQ+INFRFV PVYQVLY N  GFFWNIY+SYQSNKA
Sbjct:    9 KVAIVGHTQLLGARHRATTTSALPRRQCCGGSGTRSASTKVPAQPPPTGAPKPTKPTRASIFSMY----NSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEHSSAQHVDDHEQHEPFGDGGATSVASEIDWGRTLRFTFVGAAVVAPALHAWYGFLIRRLPGTAPATVVKRVALDQLLFAPVFLAVFLSTVMLLDGNAAKIDRKLRADYPTTVVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKA 270
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: D8LTH2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH2_ECTSI)

HSP 1 Score: 254 bits (650), Expect = 7.780e-78
Identity = 126/206 (61.17%), Postives = 156/206 (75.73%), Query Frame = 1 
Query:  265 YTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLS------EEIQH-----DVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKA 849
            Y +LLESRPLATKAVTSG IAFAGD++CQ+L  + AK+E+        +E++H     D G+ + A        +E+DWGR  RFT +G   VAP LH WYGFL+++LPGT  +T+VKRV+LDQL+FAP FLA FL+++M+ DGNAA++  KLRA Y TTLVSNWGYWIPAQ+INFRFV PVYQVLY N  GFFWNIY+SYQSNKA
Sbjct:    2 YNSLLESRPLATKAVTSGAIAFAGDVSCQLLALEVAKREEEKSSAQDVDELEHHEPFGDGGARSVA--------SEIDWGRTLRFTFVGAAVVAPALHAWYGFLIQRLPGTAPATVVKRVALDQLLFAPGFLAVFLSTVMLLDGNAAKIDRKLRADYTTTLVSNWGYWIPAQVINFRFVAPVYQVLYANFVGFFWNIYLSYQSNKA 199
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A835YNC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNC4_9STRA)

HSP 1 Score: 174 bits (441), Expect = 3.100e-46
Identity = 99/241 (41.08%), Postives = 130/241 (53.94%), Query Frame = 1 
Query:  130 NLSGARHWMNRRPVAMRRHSGGSAHPPSKGSKPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQVLVDQ--PAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNK 846
            N+S A   + R      RH G  +     G+  S+       +  Y+ LLE+ P+ATKA+TS  IA  GDI CQ+  ++   A      E   +   +   A   +T     LDW RCARF L+     AP  H WYG L R LPG  +    KR++LDQ VF+P F+  F +++MV +G AA +  KLR  Y TTLVSNW  W+PAQ+ NFR V   YQV   NC G FWN Y+S+QS K
Sbjct:    9 NISDAYQQLGRARRVRPRHRGLKSEAVQPGAAESRSINI---IQSYSRLLETNPIATKALTSAAIAGMGDIGCQIYTNRGLAAAAAGAGEAGSNAGAADGAATWGSTSQQRHLDWTRCARFMLLSGALFAPAAHAWYGLLGRLLPGQTLMVATKRMALDQFVFSPVFVGVFFSALMVLEGEAARIPDKLRQDYWTTLVSNWTLWMPAQLANFRLVPLQYQVGAANCVGLFWNAYLSFQSFK 246
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A7S2W1T0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2W1T0_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.590e-46
Identity = 88/207 (42.51%), Postives = 124/207 (59.90%), Query Frame = 1 
Query:  265 YTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAA-EVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKAPPDPQGLDSQG 882
            YT  LE+ PL TK +TSG I+ +GD+ CQ +V +  KKE          G+ ++  +         DW R  RFT++GTV VAP +HYWYG L+ + PG+   +I KR+ LDQ  FAP FL +F+ ++   +G +A E+  KL+  Y T L++NW  WIPAQIINF FV   + VL++N  GF WN Y+S+Q++    D  G  S G
Sbjct:   12 YTRKLETHPLTTKCLTSGFISGSGDMFCQFMVHRNKKKEXXX-------GNDSSGSNNEVSSLFRPDWLRACRFTILGTVLVAPTVHYWYGMLMTRFPGSSFVSIFKRLILDQAFFAPLFLPTFMLNLYALEGRSAIEMQHKLQTEYPTALLANWSIWIPAQIINFAFVPQKFMVLFSNMIGFGWNAYLSWQTH----DRHGEKSSG 207
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A6A3NKH9_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NKH9_9STRA)

HSP 1 Score: 168 bits (425), Expect = 8.670e-45
Identity = 84/197 (42.64%), Postives = 116/197 (58.88%), Query Frame = 1 
Query:  265 YTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKAPP 855
            YT+LLE+ PL+TK  T G IA  GD+ CQ+++++  K + L                        LD  R A FT +G   ++PVLH WYGFL  +LPG   + + KR++LDQL FAP FL  FL+S++  +GN  ++  KLRA + T   +NWG W+PAQI+NFRFV    QVL++N  G  WN Y+SY S+   P
Sbjct:   40 YTSLLETHPLSTKIATGGAIAGLGDMGCQLVLEEKEKHKPL------------------------LDVKRAAIFTFLGGFLISPVLHVWYGFLGSRLPGVSAAAVAKRLALDQLGFAPTFLPVFLSSVLTLEGNKEQIPDKLRADWWTVTKANWGVWVPAQILNFRFVPGPMQVLFSNVVGLLWNAYLSYVSHADVP 212
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A484DWD7_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DWD7_BRELC)

HSP 1 Score: 165 bits (417), Expect = 1.440e-43
Identity = 91/215 (42.33%), Postives = 120/215 (55.81%), Query Frame = 1 
Query:  211 SKGSKPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKAPP 855
            S  SKP K   F      Y +LL + PL+TK VT G IA  GDI CQVL++   K                          A+ D  R A FT +G V V+P+LH WYGFL  +LPG   +TI KR+ LDQ++FAP FL+ FL+S+   +G+A ++  KLRA +     +NW  W+PAQIINFRFV    QVL++N  G  WN Y+S+ S+   P
Sbjct:   27 STSSKPKKLRGFYRLWDAYASLLVTHPLSTKIVTGGTIAGLGDIGCQVLLEGERKD-------------------------AKFDLKRTAIFTFLGGVAVSPILHVWYGFLGSRLPGISKATITKRLVLDQIIFAPVFLSIFLSSVQALEGHADDIQDKLRADWWPLTKANWVIWVPAQIINFRFVPATMQVLFSNVMGLVWNSYLSFVSHSEIP 216
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A4Q2YFM0_9BACT (Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFM0_9BACT)

HSP 1 Score: 162 bits (411), Expect = 8.200e-43
Identity = 85/207 (41.06%), Postives = 118/207 (57.00%), Query Frame = 1 
Query:  220 SKPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQVLV--DQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSY 834
            S+P   SL+     +Y  LLE+ PL TK +T+G IA   D+TCQV    D+ A K  L                        +DW R   FT++ T    P+ HYWYGFL  K+ GT     +KRV LDQ++FAP  LASF +++++ +G +  +  KLR    TT+++N+  WIPAQ+INF+FV   Y+VL+ N  GFFWNIY+SY
Sbjct:   24 SRPDTSSLWQ----QYNKLLETHPLMTKCITAGAIAAVADVTCQVSFPSDEDANKSLLER----------------------MDWKRTRNFTIVNTFLFPPLAHYWYGFLSVKIVGTTFMAAIKRVVLDQMLFAPVLLASFFSAVLLVNGESDRIPDKLRNDLPTTILTNYTVWIPAQLINFQFVPIPYRVLWANAVGFFWNIYLSY 204
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BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A7S4M7U8_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M7U8_9STRA)

HSP 1 Score: 161 bits (407), Expect = 2.780e-41
Identity = 89/223 (39.91%), Postives = 129/223 (57.85%), Query Frame = 1 
Query:  190 GGSA--HPPSKGSKPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNA-AEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKA 849
            GGSA      KG+  S  S F   LA Y+ +L++ P+ATK +TSG IA +GD  CQ LV +  K             S  + P K+  F  E +  R  RFT +G  FVAP +H WYG L+   PG   + ++KR+ LDQ  FAP F+ +F+ ++M  +G   AE+  KL++ Y  T+++NW  W+PAQ++NFRF+   +QVL+ N  GF WN Y S+++  A
Sbjct:   78 GGSAIKEDTKKGASSSISSFFKQALAWYSHILDTHPIATKCLTSGFIAGSGDFLCQYLVFRNTKGV-----------SGISKPEKDAKF--EPNMLRTGRFTFLGFAFVAPAVHLWYGRLVMHFPGNSPAQVLKRLVLDQCFFAPLFVPAFMVNLMALEGRPLAEMPGKLKSDYFDTMITNWCLWVPAQLVNFRFIPLKFQVLFGNGIGFIWNTYFSWKTQDA 287
[Close]
BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: D0MT87_PHYIT (Uncharacterized protein n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MT87_PHYIT)

HSP 1 Score: 157 bits (398), Expect = 7.760e-41
Identity = 87/224 (38.84%), Postives = 122/224 (54.46%), Query Frame = 1 
Query:  211 SKGSKPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKAPPDPQGLDSQG 882
            S  S  S+ S F      Y +LLE+ PL TK VT G IA  GD+ CQ++++     ED                       A+LD  R   FT +G + ++PVLH WYGFL  +LPG   S + KR++LDQL FAP FL   L+S++  +G+A ++  KLRA +   + +NW  W+PAQI+NFRFV    QV+++N  G  WN Y+SY S+   P     +  G
Sbjct:   27 SSTSSTSESSGFRRIWDTYASLLETHPLKTKIVTGGAIAGLGDVGCQLVLEG----EDGD---------------------AKLDVKRTVIFTFLGGLLISPVLHVWYGFLGSRLPGVSTSAVAKRLALDQLGFAPTFLPIILSSVLTLEGHAEDIPDKLRADWWPLMKANWVVWVPAQILNFRFVPGSMQVIFSNVVGLLWNSYLSYVSHSQVPKALPAEESG 225
[Close]
BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Match: A0A662Y1B5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1B5_9STRA)

HSP 1 Score: 156 bits (395), Expect = 2.250e-40
Identity = 98/240 (40.83%), Postives = 128/240 (53.33%), Query Frame = 1 
Query:  142 ARHWMNRRPVAMR-RHSGGSAHPPSKGS-KPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQVLVDQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGTVFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIMVFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNCGGFFWNIYVSYQSNKAPP 855
            AR  + RRPVA   R S  S+   SKG  + S ES        Y  LLE+ PL+TK VT G IA AGD++CQ+ ++                     A     F     D  R A FT +G   ++PVLH WYGFL + +PG     IVKR++LDQLVFAP FL  F +S++  +G+  ++  KLRA +     +NW  W+PAQIINFRFV    QVL+ N  G  WN Y+SY  +   P
Sbjct:    7 ARSSLLRRPVAAAFRASSFSSTSSSKGFVRRSWES--------YATLLETHPLSTKIVTGGAIAGAGDVSCQLFIE---------------------ADDNGKF-----DVKRAAIFTFLGGALISPVLHVWYGFLGKLVPGVSSRAIVKRLALDQLVFAPTFLCVFFSSLLTLEGHLDQLPEKLRADWWPATKANWAVWVPAQIINFRFVPGSLQVLFANVVGLVWNSYLSYIGHLEAP 212
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19663.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JL95_9PHAE3.610e-8254.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH2_ECTSI7.780e-7861.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YNC4_9STRA3.100e-4641.08Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2W1T0_9STRA3.590e-4642.51Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6A3NKH9_9STRA8.670e-4542.64Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A484DWD7_BRELC1.440e-4342.33Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A4Q2YFM0_9BACT8.200e-4341.06Mpv17/PMP22 family protein n=1 Tax=Verrucomicrobia... [more]
A0A7S4M7U8_9STRA2.780e-4139.91Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
D0MT87_PHYIT7.760e-4138.84Uncharacterized protein n=2 Tax=Phytophthora infes... [more]
A0A662Y1B5_9STRA2.250e-4040.83Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig826contigF-serratus_M_contig826:164325..170826 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.7
Seed ortholog evalue2.1e-64
Seed eggNOG ortholog2880.D8LTH2
KEGG koko:K01301,ko:K13347,ko:K13348
KEGG Pathwayko04146,map04146
Hectar predicted targeting categorymitochondrion
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-02_005610.1
EC3.4.17.21
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons6
Model size1795
Cds size852
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig826.19663.1prot_F-serratus_M_contig826.19663.1Fucus serratus malepolypeptideF-serratus_M_contig826 165217..170775 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932452.040722-UTR-F-serratus_M_contig826:164324..1652161622932452.040722-UTR-F-serratus_M_contig826:164324..165216Fucus serratus maleUTRF-serratus_M_contig826 164325..165216 -
1690964315.454901-UTR-F-serratus_M_contig826:164324..1652161690964315.454901-UTR-F-serratus_M_contig826:164324..165216Fucus serratus maleUTRF-serratus_M_contig826 164325..165216 -
1622932452.1554568-UTR-F-serratus_M_contig826:170775..1708261622932452.1554568-UTR-F-serratus_M_contig826:170775..170826Fucus serratus maleUTRF-serratus_M_contig826 170776..170826 -
1690964315.5380976-UTR-F-serratus_M_contig826:170775..1708261690964315.5380976-UTR-F-serratus_M_contig826:170775..170826Fucus serratus maleUTRF-serratus_M_contig826 170776..170826 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932452.0540671-CDS-F-serratus_M_contig826:165216..1653361622932452.0540671-CDS-F-serratus_M_contig826:165216..165336Fucus serratus maleCDSF-serratus_M_contig826 165217..165336 -
1690964315.4698236-CDS-F-serratus_M_contig826:165216..1653361690964315.4698236-CDS-F-serratus_M_contig826:165216..165336Fucus serratus maleCDSF-serratus_M_contig826 165217..165336 -
1622932452.0702922-CDS-F-serratus_M_contig826:165643..1657511622932452.0702922-CDS-F-serratus_M_contig826:165643..165751Fucus serratus maleCDSF-serratus_M_contig826 165644..165751 -
1690964315.480477-CDS-F-serratus_M_contig826:165643..1657511690964315.480477-CDS-F-serratus_M_contig826:165643..165751Fucus serratus maleCDSF-serratus_M_contig826 165644..165751 -
1622932452.0848136-CDS-F-serratus_M_contig826:168342..1684861622932452.0848136-CDS-F-serratus_M_contig826:168342..168486Fucus serratus maleCDSF-serratus_M_contig826 168343..168486 -
1690964315.4920175-CDS-F-serratus_M_contig826:168342..1684861690964315.4920175-CDS-F-serratus_M_contig826:168342..168486Fucus serratus maleCDSF-serratus_M_contig826 168343..168486 -
1622932452.1033666-CDS-F-serratus_M_contig826:168834..1690401622932452.1033666-CDS-F-serratus_M_contig826:168834..169040Fucus serratus maleCDSF-serratus_M_contig826 168835..169040 -
1690964315.5005999-CDS-F-serratus_M_contig826:168834..1690401690964315.5005999-CDS-F-serratus_M_contig826:168834..169040Fucus serratus maleCDSF-serratus_M_contig826 168835..169040 -
1622932452.1191187-CDS-F-serratus_M_contig826:169330..1695431622932452.1191187-CDS-F-serratus_M_contig826:169330..169543Fucus serratus maleCDSF-serratus_M_contig826 169331..169543 -
1690964315.5092201-CDS-F-serratus_M_contig826:169330..1695431690964315.5092201-CDS-F-serratus_M_contig826:169330..169543Fucus serratus maleCDSF-serratus_M_contig826 169331..169543 -
1622932452.1398416-CDS-F-serratus_M_contig826:170714..1707751622932452.1398416-CDS-F-serratus_M_contig826:170714..170775Fucus serratus maleCDSF-serratus_M_contig826 170715..170775 -
1690964315.5259597-CDS-F-serratus_M_contig826:170714..1707751690964315.5259597-CDS-F-serratus_M_contig826:170714..170775Fucus serratus maleCDSF-serratus_M_contig826 170715..170775 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig826.19663.1

>prot_F-serratus_M_contig826.19663.1 ID=prot_F-serratus_M_contig826.19663.1|Name=mRNA_F-serratus_M_contig826.19663.1|organism=Fucus serratus male|type=polypeptide|length=284bp
MMQASGARGASLALTFTEKSVTVHRANLSGARHWMNRRPVAMRRHSGGSA
HPPSKGSKPSKESLFSLYLARYTALLESRPLATKAVTSGVIAFAGDITCQ
VLVDQPAKKEDLSEEIQHDVGSVATAPSKNTFFGAELDWGRCARFTLIGT
VFVAPVLHYWYGFLLRKLPGTGISTIVKRVSLDQLVFAPFFLASFLASIM
VFDGNAAEVVPKLRAVYGTTLVSNWGYWIPAQIINFRFVGPVYQVLYTNC
GGFFWNIYVSYQSNKAPPDPQGLDSQGTSGSDS*
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mRNA from alignment at F-serratus_M_contig826:164325..170826-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig826.19663.1 ID=mRNA_F-serratus_M_contig826.19663.1|Name=mRNA_F-serratus_M_contig826.19663.1|organism=Fucus serratus male|type=mRNA|length=6502bp|location=Sequence derived from alignment at F-serratus_M_contig826:164325..170826- (Fucus serratus male)
AATACACTGCCTCTAGATACGAGCGAGTCCGTGCTACCAACTGTTTCCAC
GATGATGCAAGCCTCTGGTGCAAGAGGGGCTTCTTTAGCATTGACTTTCA
CAGAAAAATCTGGTGAGTTGTCATTTGCTAGTTGTTCGGGATCTGAGTGA
CGTATAAGGATGTGACACAGCAGCCGTAATACCTGTAGTATAAGTCCCCA
CCTGTCTTGTATAATAATAATTGACGTCATAACAGAAGTACGCAGGGGTC
GGCTAGGCTTGGCCGCTCCCTCTTGCACAGCCCCCTCGATCAGGGCGTCT
AGCGTAGGTACGCACATGCTCTCGACTGCCAAGGCAGCGTTATCGGTATT
GCTGGCTGTTCGGGGATCCGTGTTCCCCGCTTTGAAGACGTCATTTTACG
TTCATTGTTCGGCAAGGTCAACTTTTTCTCTTTTTTACCTTCCAAACCTG
ATGACTAAGCAACCTCTACTTGTAGGGTCGCCTCAAAAGACGCAGCACCC
ATCCTTTCTCGTCGTGTGCCCTTCCCACACAAGAACGCCGTTCACATGTG
ATGTACGACGTAAGAGTAGTCAGGGAAGACGGGGTAACAGCTCCTCGGCT
GTATTCTGCACCAGAAGGTGTTGGGAGGGGTAAGGAATTGCTCCCTTCGA
TTGCATTCCGATAGCCGCGAGTGAGCACCTGTACATGGAAAAACAGGAAT
TTAACATTTAACAAACTCGGACCTCGAAGTACAACGGCCAGTACCCCGAA
AAACAGGAATTTATGAACACGCCCAGAAGGTCTAGGCGCGTTCTGATTTT
CTTTAAACTCTGAAGTATATGAAAGCCATAACATTAAAGGTACACGTCGG
CCTTGCGATCTGTGCGATCTGTGCTGGTTCACAGGTATTAATAGCAGTAA
AGGTACACATCGGCCTTGCGATCTGTGCGATCTGTGCTGGTTCACAGGTA
TCAAAAGCAGTATTAGCCGTTCAGCTCCAACCCAGTGTTATTACTGTGCA
ACAGCAGCATGATGTTGACGAATACAAGCGCGGAAGAGAACGTACAGGTT
CAACTCTTCACTCAAAGCTGGACGCTGGAAACAATTACATGAAAAGAACC
TAGCCTACCCAAGAGCACGCACTAAATCGAGAAAAATAGTTTGATATGAT
CTTGTTGAAGCGGTACACGCCTTCCAGATTAATTGCACAACAGGATGTCC
TATGGATAGCGACGTCAGCCCCTCTGGTAAAATCCGCCCAAAAACTGCTT
GCGTGTATATCATGGCATCCGCTACGACGTCAGTGACCGTACACAGGGCA
AATCTATCGGGCGCGCGACATTGGATGAACCGAAGACCGGTCGCCATGCG
GCGGCATAGCGGCGGGTCAGCTCATCCGCCTTCCAAGGGTTCGAAGCCCT
CCAAAGAGTCTTTGTTCTCGTTGTACCTGGCACGGTACACCGCTTTGCTA
GAGTCTCGACCTCTGGCAACGAAAGCCGTCACATCAGGGGTGATCGGTAA
GATGTCACAGTGTCGAGGCGAATATGGCGTGTGTGGACATCACGGGTTCT
TGTTGTGTTCCAGGTTTATTCTTGTCCCCTGTTAGTGCGACAGTTGGCAG
ATGGGCTGACCCCGTACAACAGCAAGTACCGCTCCAACTTGCGTGCACTG
CCACGACATAATTCAGTGTTTCTGAGTCCCCGAGGATCAAGAGATGGAAT
CTTCGGGATAGATAATCTCGTCTACCCTCCAAAACCTCCGACTCGTTCGC
TCCGTGACGTGCTCGATACTATTGCCGTGCCCAAAGCATTCGCAGGGGAT
ATAACTTGCCAGGTGTTGGTTGATCAGCCGGCAAAGAAGGAAGACCTGTC
GGAAGAAATCCAGCATGACGTGGGCTCGGTTGCCACTGCGCCGAGCAAGA
ACACTTTCTTCGGGGCTGAGCTGGATTGGGGACGTTGTGCGAGGTTCACG
TTAATCGGGACGGTGTTTGTTGCGCCCGTCCTCCACTATTGGGTAAGATT
GGAAGACAAACAGTGCCCAGCTTGTTGACTCGCAGAAGGCGTTTGTCTTA
TCATCGTTGTCCTAGGTGTTGGCCGAAACATATTTTGTTAGCACACCTCT
GTTTTATATATATATATATCTACCCACAAGGTCCATTTTTGTGGTCGTGA
TTCCCCAGCTATATAATTGAGTATCGTACAGTAGTAGCTCTTTGTCAATG
CGCCCGAATCGAGCGCGCCTCGACGTTCGTTACATGTTTTGCCGAGCGGA
ACTCCTCCGAAGGCATTTCTGCAAAGCGATTCAGGCATGAACACTATCAT
AATTATAGTAGGGGCCATTCCCACGCCTCTCTTCGCGCAGTACGGGTTTT
TGCTTCGGAAGCTCCCGGGCACTGGTATATCGACAATCGTGAAAAGGGTT
TCGCTGGACCAGCTGGTGTTCGCCCCCTTCTTTCTGGCGTCATTTTTGGC
ATCCATCATGGTGTTCGACGGCAACGCAGCTGAGGTACAGTAGGAAAAGA
AGGCTGGAGCGCTTGGTGAGGGGAGCCGAACGCAATCCTCTAGCGTTATA
CGCTGAACTAGCTGCAAACTTCCATCTCTGAGCTTGCCACCTTGGAAGGA
GTTTTTTTAAGAAAATTCAGAACGCACCTAGACCTTCTGAGCATCATCAT
CCCCCAGTCACGGGGGAAAAATGTCAAAACGTTCAGGTCGGCTCAAAGGC
TGCAAATACAAAAACTCTTCATGGCATTTAAACGGGTTCCCCTACGGTAG
TACCATTGGGTTAACAGTATAATATCGGGGAGAAGCCCACAGTTATACTG
TACTCTTACATTAATCGCCATGCGGGGACACCACAAAAACAGCGAAGACA
AACATTAGTAGTACATCATCAAACTATAAATAATCCAGTACAACATTTGA
AACGATAACAGAGGACCACGTGATGATGCAGACATAATCCAAGTTTCAGA
AGGTCTAGGTGCGTTCTGTATTTTTCTTCATACACGAACCCGTATTCACC
AGGAAGTAGACGAAAAGCAGGAGATCACACAAGGAGGTAAGAGGCACGCG
GAAAGAACTGAGTTCCTCGCTCCAACTTGTCAGGGCTACGACACACAGAT
GCTCCTCATGCTCGAACTTAGCTATGGCCCCGCGTTGGCCAGAAACACAA
AAAGAAGAGCGTCTGTTTGTCAAAAGTGATCAAGTGGGCCTCAAACCACC
TCGTGTAATCCACCATATGGTGACCCGAAATGTCTTCAACTCCCCATGTC
TTTTTCTTTTTTCCGAACTGACATACTTTATTTGATTTCATTTCTCGTCT
GAAAGTACAAGCTATTGAAAACATGAGCCCTTGTTTTCTACGAAACCAAG
TCTTTTTCACGTAAATCCTAAAGAAAGAGTTAATAGGGGCGGGATAGCCG
CTGCAATACATTTTACGCAAAAGACTTAAAAAACATGATAGAGGAACGTG
AAACGTAGAGATCGACTTAATTTATAATATCAGTTGCCACCTATTGTACC
ACAAACTCAGTGTAGCGTAAGTGTGATTCTTATCAGCAAGGAAGCAAGAC
TTATTAAACTGGAGAAAGTTTTAAGTCATGATAGTTTCCTGTCATTGAAC
CTGGTATTTAAAAATAAATAAAAATAATCACACTTATAGCCGATGGACCT
CTAATTACCACCCTGCCTGTGGTTACAAAGGATCTTCCCATCTCTCCCCG
GTTCACGCCTTGCAATTTTTATCGCGATGTAAGTTCAGCACTCTTACAAC
TCGTCAACCAATGGTTGAATTATTTTATTTACTTTTATTATAAAAGGTAC
GAGGAATCATTTTAGCATGTTGAGACAAATAACATAGTGGTAGTGGTACA
GAGTAGTCTAAAGGAGGGGGCAGCGAGTTTAAAATTAGAGTGGCTTCGGC
ACCTTTCATTCTACGGTAGGCGATTGAGCGCCAATAAAACTCGTTGGAAC
TTTTAAGAGAACATAATTTAATTTTGGCAATGATTACGCTGTTTGACCCT
TTTATCGCGTGCTATGGCGTATCATCACTGTTCAATAATGTTCATGGTAC
CATTTTTGCGCATCACCGGGATACAACTCGTACTGGATCACAACAATGGA
CCTGTATCTATGTATGTATGTATGGCCATCACATATAGCAAGGGTTAAGG
ACCAACCAGGTAAGGTTGCCAATCTTGCTCGTGGTCAGCCGAACAAGGAA
AATGGATATTTCCCTGTCCCCGTTCGCGCCTGAGAATTTTGTGTCGAGAG
ACGGGTTCGGAAGTCCCGTCCCCCGTCAGCCTGCTCATCTCCATACTCAG
ATACGTAGTGCCATTTTTGCCCATCCACCGGAGTACAGCTCGTGCTGGAT
CACATGCCGATATGCCTACCTTGAAGTAGAGCAGAGCAGGCCTTAAAGCG
TATCTTCGCTATGATAAATGGACGCCGCCGTGGAAATCGGGAGGAATCCC
GTAAGTAAGCACCAGTTCAGCGTGACCATGGAGAATGAGCATGCTGACGC
GGGGCGGGACGGCCCAACCCGTCTCGCGAGACCAAATTCTCAGGCGCGAA
CGGGGACAAGGACAATTCCACGAGCGGGGTTGGCAATCTTACCTGGTTGA
TCCATACTCTGATAAACCATGCATAATACATACGGTATGTTCTATGCTGT
GGTACCTACACGACGATAAGTGCGAAATGTACAGTAAAACGGTTTCTCCC
CGAAACTACCCTTTTGACGTTACCAGTATGTTATTATCGCTGGGGAACCC
GACTAAATCTCATGTGCAGTCTAAAGAAGAATATGACCGCATCAAAACTT
GTCGAGCATGTTTACCCAGTCAGGGGGGATATTGTCACCGCGTTTAGGTT
GGGACATTGGCTGCAAGGACAAACACACATCCTGGGATTTAACCAAAAGA
TTAATATTCCCAACATAACCTTTGGATTAAATTCTTCCAGACGATGTGGG
TGCTCGCGAGGTTGGAATGCGGCTAGTCTTTTTTAAGAACGAAAGGCTAG
TTTTTCTCGTACATGGACTGTTTAGCTGAATAAGTTCTTCCCTGCGTTGC
CTGCGTTTGTTCGTCAATGCGACAGGTAGTTCCCAAGCTCCGGGCTGTCT
ATGGAACGACATTGGTCAGCAATTGGGGATACTGGATTCCGGCTCAGATT
ATCAACTTTCGCTTCGTCGGCCCCGTCTACCAGGTACTGTAGATGAATGT
ACGAATGAGGGAGAGACAACCGTGCTTTCCGTTCATGCCCAGCCACTACC
CGCGATCACAGTTACTTCTACAACTCGCCCATCGTACACATTTGCCGAGT
TGATGCCTTGCGGACCTTGCGCCCATCCAGTTAACTTTTTACTACGCAGC
CGCGAAACATGAACGGCAGTTGAATGCAAACAGAGGAAAAACTCGGGTTC
GTTCCCTGGACACAATATTTTGTGCATATTCCTAAAGTCCCCGAAACTCT
CGCCCCTGCTTTGTCCTTTCGATGCATCCTCGGGGCGTAGGTATTGTACA
CCAACTGCGGCGGCTTCTTTTGGAACATCTATGTGTCGTATCAGTCAAAT
AAGGCACCCCCGGACCCGCAAGGTTTGGATTCGCAAGGCACTTCTGGATC
GGATTCCTGACAACGCTTCAAGGTAGCTCGAAGGCGGCAGCGGTGGAAAA
CGTTCTCCTGGCGGCCAAACTGGACTTCCGCGGGGATCATTCTCATTTTC
AGCCGCGTCACACGGGTTTATCCTCCAATTTGGAGTAAAAATCCCCCCCC
CCCCATTGGTAGGATCTTGATTTAAACATGCTCACGAAATATCGGCATCT
CCTGGCACCAAGACCAGTCACGAAAGTGTTTGCCTGTGGTTTGTCGATAG
TCCGTCTCCAGTTCGTAACCGAGGCGAAATCGAATGTAGGTTTAGCGCTT
GTTGTATTTAGTCGCCAATGGCTCGGGTGAGGAGGGGCCACTTGTTTCAG
TAGCGTTAACCGTTTAGACAATCTTGAGTTTTTTTTTCGCTCGGGATTTC
GGTGAATAGACTACTTGTAGAGTGCGAAAGATTCGCGTATGCTTCCGGCA
ACACGCTCATTGCTCGATCGAAGTGAATGGCCTCTAGGGTTCTATTTGAA
CTGTCTTACTTTTAAAGGATGTAATGCATCTCCGCACACACCCGGTGATG
TCCATGAGGTATCAGATTTGGTTTGCATGCAACACACCTCCGCATCATAT
ATTAATCTTTCCTATACAGTCGTTTTGCATACTGAATGTGGGAATATAGG
GGCGCAGAAAAATTGGTCGATGGGGTTTCCTGAATACCTGGGACACATTA
TCTTTTACTCAAGCTACCTTGAGGGGTGCCGACGGAATCACGGCGGTAAA
CGCCATTGGGACGCAATTGCGCGACGTGATAAACTATTACTCGAAACTGA
CCCGATGGCGGTTGACGGAACAAATAATTGGACGCCGTCGCGGAAAGCAG
AAGGAATCCCGAGTAGGCGCCAGACCTAGCCCGAGTGTGAAGATTGAGCA
AG
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Coding sequence (CDS) from alignment at F-serratus_M_contig826:164325..170826-

>mRNA_F-serratus_M_contig826.19663.1 ID=mRNA_F-serratus_M_contig826.19663.1|Name=mRNA_F-serratus_M_contig826.19663.1|organism=Fucus serratus male|type=CDS|length=1704bp|location=Sequence derived from alignment at F-serratus_M_contig826:164325..170826- (Fucus serratus male)
ATGATGCAAGCCTCTGGTGCAAGAGGGGCTTCTTTAGCATTGACTTTCAC
AGAAAAATCTGATGATGCAAGCCTCTGGTGCAAGAGGGGCTTCTTTAGCA
TTGACTTTCACAGAAAAATCTGTGACCGTACACAGGGCAAATCTATCGGG
CGCGCGACATTGGATGAACCGAAGACCGGTCGCCATGCGGCGGCATAGCG
GCGGGTCAGCTCATCCGCCTTCCAAGGGTTCGAAGCCCTCCAAAGAGTCT
TTGTTCTCGTTGTACCTGGCACGGTACACCGCTTTGCTAGAGTCTCGACC
TCTGGCAACGAAAGCCGTCACATCAGGGGTGATCGTGACCGTACACAGGG
CAAATCTATCGGGCGCGCGACATTGGATGAACCGAAGACCGGTCGCCATG
CGGCGGCATAGCGGCGGGTCAGCTCATCCGCCTTCCAAGGGTTCGAAGCC
CTCCAAAGAGTCTTTGTTCTCGTTGTACCTGGCACGGTACACCGCTTTGC
TAGAGTCTCGACCTCTGGCAACGAAAGCCGTCACATCAGGGGTGATCGCA
TTCGCAGGGGATATAACTTGCCAGGTGTTGGTTGATCAGCCGGCAAAGAA
GGAAGACCTGTCGGAAGAAATCCAGCATGACGTGGGCTCGGTTGCCACTG
CGCCGAGCAAGAACACTTTCTTCGGGGCTGAGCTGGATTGGGGACGTTGT
GCGAGGTTCACGTTAATCGGGACGGTGTTTGTTGCGCCCGTCCTCCACTA
TTGGCATTCGCAGGGGATATAACTTGCCAGGTGTTGGTTGATCAGCCGGC
AAAGAAGGAAGACCTGTCGGAAGAAATCCAGCATGACGTGGGCTCGGTTG
CCACTGCGCCGAGCAAGAACACTTTCTTCGGGGCTGAGCTGGATTGGGGA
CGTTGTGCGAGGTTCACGTTAATCGGGACGGTGTTTGTTGCGCCCGTCCT
CCACTATTGGTACGGGTTTTTGCTTCGGAAGCTCCCGGGCACTGGTATAT
CGACAATCGTGAAAAGGGTTTCGCTGGACCAGCTGGTGTTCGCCCCCTTC
TTTCTGGCGTCATTTTTGGCATCCATCATGGTGTTCGACGGCAACGCAGC
TGAGTACGGGTTTTTGCTTCGGAAGCTCCCGGGCACTGGTATATCGACAA
TCGTGAAAAGGGTTTCGCTGGACCAGCTGGTGTTCGCCCCCTTCTTTCTG
GCGTCATTTTTGGCATCCATCATGGTGTTCGACGGCAACGCAGCTGAGGT
AGTTCCCAAGCTCCGGGCTGTCTATGGAACGACATTGGTCAGCAATTGGG
GATACTGGATTCCGGCTCAGATTATCAACTTTCGCTTCGTCGGCCCCGTC
TACCAGGTAGTTCCCAAGCTCCGGGCTGTCTATGGAACGACATTGGTCAG
CAATTGGGGATACTGGATTCCGGCTCAGATTATCAACTTTCGCTTCGTCG
GCCCCGTCTACCAGGTATTGTACACCAACTGCGGCGGCTTCTTTTGGAAC
ATCTATGTGTCGTATCAGTCAAATAAGGCACCCCCGGACCCGCAAGGTTT
GGATTCGCAAGGCACTTCTGGATCGGATTCCTGAGTATTGTACACCAACT
GCGGCGGCTTCTTTTGGAACATCTATGTGTCGTATCAGTCAAATAAGGCA
CCCCCGGACCCGCAAGGTTTGGATTCGCAAGGCACTTCTGGATCGGATTC
CTGA
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