mRNA_F-serratus_M_contig826.19660.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5JYQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYQ2_9PHAE) HSP 1 Score: 185 bits (469), Expect = 1.890e-53 Identity = 85/126 (67.46%), Postives = 105/126 (83.33%), Query Frame = 1
Query: 121 VVGSMREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSHAA 498
VVG+M+E++ +A LPIIHY +DLW C+VS RK+LGVHV++V S F LRHAL++VK YAPS+ + T++AS+ILFTIFRATL EYGIK++DLAGGTTDSG DVKAM VN LLGLH + WDWC H A
Sbjct: 205 VVGNMQEEINKAPLPIIHYGLDLWTCKVSGRKYLGVHVFYVDSNFSLRHALISVKHYAPSTEIQGTEKASEILFTIFRATLAEYGIKLSDLAGGTTDSGSDVKAMCVNILLGLHKIWWDWCDCHLA 330
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5L1G0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1G0_9PHAE) HSP 1 Score: 178 bits (452), Expect = 3.310e-49 Identity = 82/140 (58.57%), Postives = 108/140 (77.14%), Query Frame = 1
Query: 79 KRLLVELYIATKKAVVGSMREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSHAA 498
K LLVE+Y+ATKKAVVG+M ++++A LPI+HY +DLW C+++ K++ VHV +V S +L+H LLAVK YAPS+AV T +AS+ILF +F + L E+G+K++DLAGGTTDSG DVKAM VN LL H SWDWC H A
Sbjct: 210 KHLLVEMYVATKKAVVGNMLTEIERAPLPIVHYGIDLWQCKITGLKYIDVHVCYVNSNLELQHELLAVKHYAPSAAVQATGKASEILFNVFNSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKGSWDWCVCHLA 349
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5KZ81_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ81_9PHAE) HSP 1 Score: 158 bits (399), Expect = 2.690e-44 Identity = 80/166 (48.19%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 4 SMWDEIVGVMAGNGPT-FPALPARKVKRLLVELYIATKKAVVGSMREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAV--KPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSH 492
S DE+ ++A G + FP L R+VK LL ELY+ATKK VVG+M E++++A LP++H+ +D+W + S RKFLGVH+Y+VT+ F+++HALL V K Y+P RAS++L I ++ L E G+ +DLA GTTDSG DVKA+ VN L + V W+WC H
Sbjct: 55 SSGDELRTLLALIGDSDFPPLRPRRVKHLLTELYVATKKVVVGNMLEEVRKAPLPVLHHMIDIWTEKGSGRKFLGVHLYYVTASFEMKHALLCVGVKRYSPDQGALSEARASEVLLEIVKSILVEVGLSPSDLASGTTDSGSDVKAVSVNGLHPHYGVLWNWCACH 220
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5JJJ9_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJJ9_9PHAE) HSP 1 Score: 164 bits (414), Expect = 8.510e-44 Identity = 76/159 (47.80%), Postives = 111/159 (69.81%), Query Frame = 1
Query: 16 EIVGVMAGNGPTFPALPARKVKRLLVELYIATKKAVVGSMREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSH 492
E++ G ++P LP R+VK L+ ELY+ATKK VVG+M +++++A LPI+H+ +D+W + S RKFLG+HV++V + F+L+ ALL++K YAP QRASD+LF I ++ L E+G+K + LA GTTDSG DVKA+ N L ++ V W WC H
Sbjct: 207 EMMATATGTS-SYPTLPPRRVKHLITELYVATKKVVVGNMVQEVERAPLPILHHNIDIWTDKGSGRKFLGLHVFYVDANFELKDALLSIKRYAPDQGSLGDQRASDVLFQIMKSVLEEFGLKPSHLASGTTDSGSDVKAVSTNCLWPMYAVLWCWCFCH 364
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5KS21_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS21_9PHAE) HSP 1 Score: 144 bits (364), Expect = 2.080e-38 Identity = 70/162 (43.21%), Postives = 107/162 (66.05%), Query Frame = 1
Query: 7 MWDEIVGVMAGNGPTFPALPARKVKRLLVELYIATKKAVVGSMREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSH 492
M+ E++ GN ++P LP ++VK LLVELY +TKKAV+G M +++ A LPI+H+ +D+W + S RKFLGVH+++VT+ F+L+ AL++ K A+++L I + L E+G++ +DLA GTTDSG DVK++ VN L + V W+WC H
Sbjct: 130 MFREMMATHGGN-TSYPELPPKRVKHLLVELYCSTKKAVLGDMLVEVRSAPLPILHHMIDIWTDKPSGRKFLGVHLFYVTANFELKQALISAK-------------AAEVLLKILESVLHEFGLRASDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCCCH 277
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5JN28_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN28_9PHAE) HSP 1 Score: 134 bits (336), Expect = 3.220e-36 Identity = 62/113 (54.87%), Postives = 88/113 (77.88%), Query Frame = 1
Query: 133 MREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVS 471
M ++++A LPI+HY +DLW C+++ K++ HV +V S F+L++ALL+VK YAPS+AV T +AS+ILF +F++ L E+G+K++DLAGGTTDSG DVKAM VN LL H VS
Sbjct: 1 MLTEIERAPLPIVHYGIDLWQCKITGLKYIDGHVCYVNSNFELQYALLSVKHYAPSAAVQVTDKASEILFIVFKSVLREFGVKISDLAGGTTDSGSDVKAMCVNFLLAQHKVS 113
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5JB08_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB08_9PHAE) HSP 1 Score: 121 bits (304), Expect = 4.780e-29 Identity = 56/120 (46.67%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 133 MREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSH 492
M E+++ A LPI+H+ +D+WA + S RKFLGVHV++VT+ F+L+ LL++K Y PS +A+++L I A L E+G + +DLA GTTDSG DVK++ VN L + V W+WC H
Sbjct: 1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLLSIKRYRPSQDALGEAKAAEVLLEILEAILHEFGRRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCH 120
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5JZ66_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ66_9PHAE) HSP 1 Score: 110 bits (276), Expect = 1.670e-25 Identity = 54/120 (45.00%), Postives = 81/120 (67.50%), Query Frame = 1
Query: 133 MREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSH 492
M E+++ A LPI+H+ +D+WA + S RKFLGVHV++VT+ F+L+ LL S A+ + +A+++L I A L E+G++ +DLA GTTDSG DVK++ VN L + V W+WC H
Sbjct: 1 MVEEVRNAPLPILHHMIDIWADKPSGRKFLGVHVFYVTANFELKQTLL-------SDALGEV-KAAEVLLEILEAILNEFGLRPSDLASGTTDSGSDVKSVSVNGLHPKYGVLWNWCYCH 112
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5L8D8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8D8_9PHAE) HSP 1 Score: 108 bits (271), Expect = 1.730e-25 Identity = 62/162 (38.27%), Postives = 88/162 (54.32%), Query Frame = 1
Query: 7 MWDEIVGVMAGNGPTFPALPARKVKRLLVELYIATKKAVVGSMREDMQQATLPIIHYQVDLWACEVSARKFLGVHVYWVTSEFKLRHALLAVKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSH 492
M+ E++ AGN P +P LPA +VK LLVE+YIATKKAV+ +M E+++ A LPI+H+ +D+W + S RK L W + +L I +A L E+G++ +DLA GT DSG DVK++ N L V W+WC H
Sbjct: 1 MFKEMMATAAGNTP-YPELPAERVKDLLVEMYIATKKAVMSNMLEEVKNAPLPILHHMIDIWTDKGSGRKTL-----W-------------------------ERPRPGVLLEIVKAILHEFGLRTSDLASGTADSGSDVKSVSFNGLHPQFGVLWNWCFCH 131
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Match: A0A6H5KZ46_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ46_9PHAE) HSP 1 Score: 99.8 bits (247), Expect = 2.720e-21 Identity = 45/73 (61.64%), Postives = 57/73 (78.08%), Query Frame = 1
Query: 280 VKPYAPSSAVNDTQRASDILFTIFRATLGEYGIKVADLAGGTTDSGPDVKAMGVNTLLGLHDVSWDWCTSHAA 498
VK YAPS+AV +++AS +LFT+FR+ L E+GIK++DLAGGTTDSG D+KAM N LL H+V WDWC H A
Sbjct: 82 VKHYAPSAAVQASEKASGVLFTVFRSLLAEFGIKLSDLAGGTTDSGSDIKAMCTNFLLAQHNVYWDWCVCHLA 154 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig826.19660.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig826.19660.1 >prot_F-serratus_M_contig826.19660.1 ID=prot_F-serratus_M_contig826.19660.1|Name=mRNA_F-serratus_M_contig826.19660.1|organism=Fucus serratus male|type=polypeptide|length=164bp MWDEIVGVMAGNGPTFPALPARKVKRLLVELYIATKKAVVGSMREDMQQAback to top mRNA from alignment at F-serratus_M_contig826:91434..92855- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig826.19660.1 ID=mRNA_F-serratus_M_contig826.19660.1|Name=mRNA_F-serratus_M_contig826.19660.1|organism=Fucus serratus male|type=mRNA|length=1422bp|location=Sequence derived from alignment at F-serratus_M_contig826:91434..92855- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig826:91434..92855- >mRNA_F-serratus_M_contig826.19660.1 ID=mRNA_F-serratus_M_contig826.19660.1|Name=mRNA_F-serratus_M_contig826.19660.1|organism=Fucus serratus male|type=CDS|length=984bp|location=Sequence derived from alignment at F-serratus_M_contig826:91434..92855- (Fucus serratus male)back to top |