prot_F-serratus_M_contig825.19653.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig825.19653.1
Unique Nameprot_F-serratus_M_contig825.19653.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length317
Homology
BLAST of mRNA_F-serratus_M_contig825.19653.1 vs. uniprot
Match: D7G9G4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G9G4_ECTSI)

HSP 1 Score: 306 bits (784), Expect = 2.120e-101
Identity = 154/208 (74.04%), Postives = 174/208 (83.65%), Query Frame = 0
Query:  109 SQAVEVSAPADTFVDFIDSRRLFSCRIPSNFLRRERTRDKSGTVFVGGDFNKAEIVSVQVLTAYDLLRDAGLPTIGDLAKWESLGKPRLVAELLKQRRDADATGGATVESVVLPGVKVDGDVLQFTLKSPIKVMRVDLLEKGQGVSELYRNTLAKAVMRGDGSFLVIWAGALNTDLDQDEGARGRLKEIVDSFRLEGVVVDGVRLGAV 316
            S A EV+A    FVDF DSR LFSCRIP NFLR ER +DK GTVFV GD++KAE++SVQV+  +DLL DAGLPTIGDL KWE++GKP  +A+LLKQRRD+DA GG  VESVVLPGV +DGDVLQF LKSPIKVMR DLLEK QGVSELYRNT  KA+MRGDGSFLV+WAGALNTD DQ+ GA+ RLK   DSFRLEG++VDGVRLGAV
Sbjct:   34 SSAAEVAATE--FVDFEDSRGLFSCRIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKTFDLLTDAGLPTIGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVDGVRLGAV 239          
BLAST of mRNA_F-serratus_M_contig825.19653.1 vs. uniprot
Match: A0A6H5KHB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB6_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 3.010e-99
Identity = 152/208 (73.08%), Postives = 174/208 (83.65%), Query Frame = 0
Query:  109 SQAVEVSAPADTFVDFIDSRRLFSCRIPSNFLRRERTRDKSGTVFVGGDFNKAEIVSVQVLTAYDLLRDAGLPTIGDLAKWESLGKPRLVAELLKQRRDADATGGATVESVVLPGVKVDGDVLQFTLKSPIKVMRVDLLEKGQGVSELYRNTLAKAVMRGDGSFLVIWAGALNTDLDQDEGARGRLKEIVDSFRLEGVVVDGVRLGAV 316
            S A EV+A    FVDF DSR LFSC IP NFLR ER +DK GTVFV GD++KAE++SVQV+ A+DLL DAGLPT+GDL KWE++GKP  +A+LLKQRRD+DA GG  VESVVLPGV +DGDVLQF LKSPIKVMR DLLEK QGVSELYRNT  KA+MRGDGSFLV+WAGALNTD DQ+ GA+ RLK   DSFRLEG++V+GVRLGAV
Sbjct:   98 SSAAEVAATE--FVDFEDSRGLFSCLIPKNFLRAERAKDKRGTVFVAGDYSKAEVLSVQVVKAFDLLTDAGLPTVGDLTKWENVGKPAAIADLLKQRRDSDAAGGTPVESVVLPGVTLDGDVLQFMLKSPIKVMRADLLEKEQGVSELYRNTYVKAIMRGDGSFLVVWAGALNTDWDQEGGAKDRLKVATDSFRLEGLIVEGVRLGAV 303          
BLAST of mRNA_F-serratus_M_contig825.19653.1 vs. uniprot
Match: A0A835Z4Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Q3_9STRA)

HSP 1 Score: 149 bits (376), Expect = 4.770e-40
Identity = 89/196 (45.41%), Postives = 119/196 (60.71%), Query Frame = 0
Query:  116 APADTFVDFIDSRRLFSCRIPSNFLRRERTRDKS--GTVFVGGDFNKAEIVSVQVLTAYDLLRDAG-----LPTIGDLAKWESLGKPRLVAELLKQRRDADATGGATVESVVLPG-VKVDGDVLQFTLKSPIKVMRVDLLEKGQGVSELYRNTLAKAVMRGDGSFLVIWAGALNTDLDQDEGARGRLKEIVDSFRL 303
            A   +   + DSR  F   +P+N++R ER  D+   G +FV G++ KA  +SV ++ +  LLRDAG     LPT  DL  W  +G P  +A+LL  RRD DA   A  +S VLP  V +DG+ L F +K+ + V R DLLEK +GV ELYR T  KA+MRGDG+FL+ WAGALNT+  +   AR  L  +V SF L
Sbjct:   34 AEVPSLAAYSDSRGYFEISLPANWVRAERKGDQEAKGVLFVTGNYVKAITLSVAIIKSSQLLRDAGTAPLVLPT-DDLTTWAGVGTPMGIAKLLAFRRDQDAAQAAAQDSEVLPDTVVLDGNALTFMIKTRVPVQRPDLLEKERGVRELYRLTYGKALMRGDGTFLLCWAGALNTEWGEPTNARDTLAAVVASFHL 228          
BLAST of mRNA_F-serratus_M_contig825.19653.1 vs. uniprot
Match: A0A1E7FHR6_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FHR6_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 2.240e-15
Identity = 60/196 (30.61%), Postives = 99/196 (50.51%), Query Frame = 0
Query:  123 DFIDSRRLFSCRIPSNFLRRERTRD------------KSGTVFVGGDFNKAEIVSVQVLTAYDLLRDAGLPTIGDLAKWESLGKPRLVAELLKQRRDADAT--GGATVESVVLPGVKVDGDVLQFTLKSPIKVMRVDLLEKGQGVSELYRNTLAKAVMRGD-GSFLVIWAGALNTDLDQDEGARG-RLKEIVDSFR 302
            +F+D   LFS R+P  F    RT              +  ++F  G+  KAE+++V+      LL + G+   G+L  +  +G P+ VA L+  RR+ +A   G   ++S+    V  DG  L F +K+ I V   + L + +G+S+L+R T+AK  +  D G+ + I+A AL  D     G  G  L + V+SF+
Sbjct:   71 EFVDPAGLFSLRVPKGFFTLRRTAKGDLPDKKTGKGRRGSSIFTAGNMAKAEVIAVERYPTRVLLEENGIAATGNLDTFPGIGNPKAVANLIILRREKEAPNKGLRVLDSIE---VTPDGKELTFRIKTEIDVQNPEALFEQEGISQLFRITVAKCSLNSDDGNIMAIFASALEQDFTN--GVDGPALVDSVNSFQ 261          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig825.19653.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7G9G4_ECTSI2.120e-10174.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KHB6_9PHAE3.010e-9973.08Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835Z4Q3_9STRA4.770e-4045.41Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1E7FHR6_9STRA2.240e-1530.61Uncharacterized protein n=1 Tax=Fragilariopsis cyl... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 26..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..316
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.699

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig825contigF-serratus_M_contig825:259073..261885 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig825.19653.1mRNA_F-serratus_M_contig825.19653.1Fucus serratus malemRNAF-serratus_M_contig825 258844..261899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig825.19653.1 ID=prot_F-serratus_M_contig825.19653.1|Name=mRNA_F-serratus_M_contig825.19653.1|organism=Fucus serratus male|type=polypeptide|length=317bp
MAWSSTSSRRQQVTSSLFILCCVLFDFVQSFNCDFSWVVAAGIRKLVEHE
NDHVTKHAALRYSRSTEGQSSGAASRARESILEQPAWSRTEFLKAAGWIM
VATSGLSASQAVEVSAPADTFVDFIDSRRLFSCRIPSNFLRRERTRDKSG
TVFVGGDFNKAEIVSVQVLTAYDLLRDAGLPTIGDLAKWESLGKPRLVAE
LLKQRRDADATGGATVESVVLPGVKVDGDVLQFTLKSPIKVMRVDLLEKG
QGVSELYRNTLAKAVMRGDGSFLVIWAGALNTDLDQDEGARGRLKEIVDS
FRLEGVVVDGVRLGAV*
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