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Homology
BLAST of mRNA_F-serratus_M_contig825.19651.1 vs. uniprot
Match: D7FJK5_ECTSI (UBX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJK5_ECTSI) HSP 1 Score: 335 bits (858), Expect = 1.010e-104 Identity = 204/416 (49.04%), Postives = 265/416 (63.70%), Query Frame = 1
Query: 106 LASDFETALNLIVKHHGNDVKGLSHTLESLKHIATRLNDEPHIAKYRTIRMLNKTFWERVGRVDGGIPFMVALGFDIVDQGGE-PAFHTRKGAPVKSDLIRALRLLSAQEALSTGSAVDRELVDGDAKMDMSGTSLKALDTSGFNPFATVFSRKSRTRVQDRLEKELASLAERQASVQQRFSGIGDRNITFLLPRPTSRRVADEHERDSVGGGDDRDLQERSLALVSQVSRERIAREELRRFETRAAKELRLLRTSKVYSYVLVRVRLPSGVYIQGRFNLEETLEDVYHVLEQSLSEEAGVESPADQSCLGFELYMAPATRVLPRDSTR-LKDVNAGAPACMLHLRWQGEGSNAELWAQKLEASKGRIT-GGSARAWLPYAPRHDLPEACSPKRPTNPPRAERRSSPVDDGEDLES 1344
LAS+ + A + IV HH D++ L+ TL+SL +IA L +EP KYR IR+LNK WERVG VDGGI FM ALGFD+ G+ P F R GAPV++D+ +AL LLSA+ L S R + + + + SGFNPF T FSRKSRTR+Q+R E+ LA L+ QA QQRFS + +R +T LLP+ A+ E++ G + D ++R L LV+Q+ RER+ +E+ RFETRAAK+LRLLRT+K Y YVL R+RLP GVY+Q RFN +E+LE +Y V Q LS EA V+ Q C FEL+MAP TRVLPRDST+ L+D N APAC+LHLRW+ + + WAQ E R T G A +PY+ R D+PEA S +RP P AE + DDG + ES
Sbjct: 19 LASNLQGAFDQIVSHHAKDLRALNRTLDSLTNIAENLFNEPENPKYRKIRLLNKVVWERVGSVDGGISFMSALGFDLNPGTGDGPCFQARTGAPVETDVRQALDLLSAR--LLHQSESGRPAAEAEPR-----------EASGFNPFTTAFSRKSRTRLQERAEQGLAHLSYSQAKRQQRFSTLEERLVTILLPQQPHEASAEMEEQEQDGEQGEADAEQRELELVAQLWRERMGNDEVERFETRAAKKLRLLRTAKSYPYVLCRIRLPGGVYLQARFNSKESLETIYQVFGQVLSMEAEVDG---QLCHNFELFMAPPTRVLPRDSTQSLEDSNILAPACVLHLRWKSGEAGLQTWAQNFEERLSRATMDGLALPRVPYSSRLDVPEAISSRRPQELPPAEEGAD--DDGSESES 416
BLAST of mRNA_F-serratus_M_contig825.19651.1 vs. uniprot
Match: A0A835YNR5_9STRA (UBX domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNR5_9STRA) HSP 1 Score: 117 bits (293), Expect = 1.200e-24 Identity = 116/391 (29.67%), Postives = 174/391 (44.50%), Query Frame = 1
Query: 181 TLESLKHIAT-RLNDEPHIAKYRTIRMLNKTFWERVGRVDGGIPFMVALGFDIVDQGGE--PAFHTRKGAPVKSDLIRALRLLSAQ-EALSTGSAVDRELVDGDAKMDMS--GTSLKALDTSGFNPFATVFSRKSRTRVQDRLEKELASLAERQASVQQRFSGIGDRNITFLLP---RPTSRRVA---------DEHERDSVGGGDDRD-----------LQERSLALVSQVSRERIAREELRRFETRAAKELRLLRTSKVYSYVLVRVRLPSGVYIQGRFNLEE-TLEDVYHVLEQSLSEEAGVESPADQSCLGFELYMAPATRVLPRDSTRLKDVNAGAPACMLHLRWQG--EGSNAELWAQKLEASKGRITGGSARAWLPYAPRHDLP 1257
TL+ L+ + L + + ++IR++N FWE VG V GGI M+ALGF++ D+G PAF R A +S L A LL + AL GS G A S FNP+A+ FSRK++TRVQD ++ + RF + DRNIT L P +P + A E D+ GD L + + V Q R AR++ + F + AA+ L LR +++ +Y LV VR P GV +Q R+N +E T+ V V+ SL E L F L TR L D L++ A A ++HL+W+ E ++ A+ + + + G+ ++D+P
Sbjct: 10 TLQLLQRVVEGALQQQNQESAAKSIRLMNSAFWESVGSVPGGIGLMMALGFELEDRGDGRGPAFVLRGDAD-RSLLELAQALLQEELAALGKGSVSSSXXXXXXXXXXXXXIGAIAGASAQSDFNPYASAFSRKAKTRVQDXXXXXXXXXXXQRRAHLLRFDKMEDRNITVLQPLTGKPATGAAATSADANASLSSSEADAASSGDHSSEYDXXXXXXXXLSAATASAVLQAIRSSRARQQTQPFASAAARRLHALRAARLRAYALVNVRFPDGVQLQARYNAQEDTVGHVVDVVRHSLRREV--------RHLPFRLSALGPTRALLPDQL-LQEAGMVAAANVVHLKWEAGEEAKSSAAMAETMSVLRAELVQGARCLAAARREQYDVP 390
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 84.0 |
| Seed ortholog evalue | 2e-13 |
| Seed eggNOG ortholog | 653948.CCA22445 |
| Preferred name | ASPSCR1 |
| KEGG ko | ko:K15627 |
| KEGG Pathway | ko05202,map05202 |
| Hectar predicted targeting category | signal peptide |
| GOs | GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0005886,GO:0006508,GO:0006511,GO:0006807,GO:0006810,GO:0006886,GO:0006950,GO:0008104,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009653,GO:0009893,GO:0009898,GO:0009987,GO:0010033,GO:0010243,GO:0010498,GO:0010604,GO:0010827,GO:0012506,GO:0015031,GO:0015833,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0019898,GO:0019899,GO:0019941,GO:0022411,GO:0030154,GO:0030163,GO:0030433,GO:0030435,GO:0030659,GO:0031090,GO:0031323,GO:0031325,GO:0031399,GO:0031401,GO:0031410,GO:0031974,GO:0031981,GO:0031982,GO:0032268,GO:0032270,GO:0032501,GO:0032502,GO:0032879,GO:0032984,GO:0033036,GO:0033500,GO:0033554,GO:0034613,GO:0034762,GO:0034976,GO:0035265,GO:0036503,GO:0040007,GO:0042221,GO:0042592,GO:0042593,GO:0042886,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043632,GO:0043933,GO:0043934,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044433,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045184,GO:0046324,GO:0046907,GO:0048471,GO:0048518,GO:0048522,GO:0048589,GO:0048646,GO:0048856,GO:0048869,GO:0048878,GO:0050789,GO:0050794,GO:0050896,GO:0051049,GO:0051117,GO:0051171,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051247,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0060255,GO:0065007,GO:0065008,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0080090,GO:0097708,GO:0098552,GO:0098562,GO:1901564,GO:1901565,GO:1901575,GO:1901698 |
| EggNOG free text desc. | endosome to lysosome transport via multivesicular body sorting pathway |
| EggNOG OGs | KOG2699@1,KOG2699@2759 |
| Ec32 ortholog description | UBX domain |
| Ec32 ortholog | Ec-04_006450.1 |
| COG Functional cat. | CO |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001 |
| Exons | 6 |
| Model size | 2099 |
| Cds size | 1353 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932449.7662144-UTR-F-serratus_M_contig825:208381..208411 | 1622932449.7662144-UTR-F-serratus_M_contig825:208381..208411 | Fucus serratus male | UTR | F-serratus_M_contig825 208382..208411 + |
| 1690964314.4410203-UTR-F-serratus_M_contig825:208381..208411 | 1690964314.4410203-UTR-F-serratus_M_contig825:208381..208411 | Fucus serratus male | UTR | F-serratus_M_contig825 208382..208411 + |
| 1622932449.7797184-UTR-F-serratus_M_contig825:216533..216551 | 1622932449.7797184-UTR-F-serratus_M_contig825:216533..216551 | Fucus serratus male | UTR | F-serratus_M_contig825 216534..216551 + |
| 1690964314.4561827-UTR-F-serratus_M_contig825:216533..216551 | 1690964314.4561827-UTR-F-serratus_M_contig825:216533..216551 | Fucus serratus male | UTR | F-serratus_M_contig825 216534..216551 + |
| 1622932449.8719432-UTR-F-serratus_M_contig825:219630..220328 | 1622932449.8719432-UTR-F-serratus_M_contig825:219630..220328 | Fucus serratus male | UTR | F-serratus_M_contig825 219631..220328 + |
| 1690964314.5279372-UTR-F-serratus_M_contig825:219630..220328 | 1690964314.5279372-UTR-F-serratus_M_contig825:219630..220328 | Fucus serratus male | UTR | F-serratus_M_contig825 219631..220328 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622932449.7936044-CDS-F-serratus_M_contig825:216551..216849 | 1622932449.7936044-CDS-F-serratus_M_contig825:216551..216849 | Fucus serratus male | CDS | F-serratus_M_contig825 216552..216849 + |
| 1690964314.4649472-CDS-F-serratus_M_contig825:216551..216849 | 1690964314.4649472-CDS-F-serratus_M_contig825:216551..216849 | Fucus serratus male | CDS | F-serratus_M_contig825 216552..216849 + |
| 1622932449.8122566-CDS-F-serratus_M_contig825:217304..217487 | 1622932449.8122566-CDS-F-serratus_M_contig825:217304..217487 | Fucus serratus male | CDS | F-serratus_M_contig825 217305..217487 + |
| 1690964314.4743388-CDS-F-serratus_M_contig825:217304..217487 | 1690964314.4743388-CDS-F-serratus_M_contig825:217304..217487 | Fucus serratus male | CDS | F-serratus_M_contig825 217305..217487 + |
| 1622932449.8286054-CDS-F-serratus_M_contig825:218305..218733 | 1622932449.8286054-CDS-F-serratus_M_contig825:218305..218733 | Fucus serratus male | CDS | F-serratus_M_contig825 218306..218733 + |
| 1690964314.4841688-CDS-F-serratus_M_contig825:218305..218733 | 1690964314.4841688-CDS-F-serratus_M_contig825:218305..218733 | Fucus serratus male | CDS | F-serratus_M_contig825 218306..218733 + |
| 1622932449.8426452-CDS-F-serratus_M_contig825:219025..219312 | 1622932449.8426452-CDS-F-serratus_M_contig825:219025..219312 | Fucus serratus male | CDS | F-serratus_M_contig825 219026..219312 + |
| 1690964314.5004952-CDS-F-serratus_M_contig825:219025..219312 | 1690964314.5004952-CDS-F-serratus_M_contig825:219025..219312 | Fucus serratus male | CDS | F-serratus_M_contig825 219026..219312 + |
| 1622932449.8594277-CDS-F-serratus_M_contig825:219473..219630 | 1622932449.8594277-CDS-F-serratus_M_contig825:219473..219630 | Fucus serratus male | CDS | F-serratus_M_contig825 219474..219630 + |
| 1690964314.5113237-CDS-F-serratus_M_contig825:219473..219630 | 1690964314.5113237-CDS-F-serratus_M_contig825:219473..219630 | Fucus serratus male | CDS | F-serratus_M_contig825 219474..219630 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig825.19651.1 >prot_F-serratus_M_contig825.19651.1 ID=prot_F-serratus_M_contig825.19651.1|Name=mRNA_F-serratus_M_contig825.19651.1|organism=Fucus serratus male|type=polypeptide|length=451bp
MRRFIYCALATIVFRISAVLASDFETALNLIVKHHGNDVKGLSHTLESLK HIATRLNDEPHIAKYRTIRMLNKTFWERVGRVDGGIPFMVALGFDIVDQG GEPAFHTRKGAPVKSDLIRALRLLSAQEALSTGSAVDRELVDGDAKMDMS GTSLKALDTSGFNPFATVFSRKSRTRVQDRLEKELASLAERQASVQQRFS GIGDRNITFLLPRPTSRRVADEHERDSVGGGDDRDLQERSLALVSQVSRE RIAREELRRFETRAAKELRLLRTSKVYSYVLVRVRLPSGVYIQGRFNLEE TLEDVYHVLEQSLSEEAGVESPADQSCLGFELYMAPATRVLPRDSTRLKD VNAGAPACMLHLRWQGEGSNAELWAQKLEASKGRITGGSARAWLPYAPRH DLPEACSPKRPTNPPRAERRSSPVDDGEDLESTAADSSEFFEKTLNCRLE * back to topmRNA from alignment at F-serratus_M_contig825:208382..220328+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig825.19651.1 ID=mRNA_F-serratus_M_contig825.19651.1|Name=mRNA_F-serratus_M_contig825.19651.1|organism=Fucus serratus male|type=mRNA|length=11947bp|location=Sequence derived from alignment at F-serratus_M_contig825:208382..220328+ (Fucus serratus male) GCTCCACAGCATCTAAGCAGGCATTGGAAGGTGAGATTTCGCGAATGCAA
TTATTCTTCCCCATATGTTTAAACCGTATATTATTGCTGCTGACCCGCTG
CGGAATGTCAAGGTTTGAACTATTAGATCAGAAGGTCTAGGTGCATTCAG
ATTTTTCTTCAAACACCTGTAGAGGACGATACTTGACCAGTATATACTCC
AGCTGTGCCTGCCGTCCGTCAGGGTGTTGACAGCAAAGGCAATCTGCCTT
AACACAGGCAACTACTTCGGGTGTCTTCAAACCCATCTCTTGAGGTTCCT
ATGGCTTATTTCCATCGATCAATGCTGGGACCGAAAGTTACCGGTGTAAT
TTTGATTTACAAACGTCACGCAAACGACGAGGGAGTCTACTTATCTCTAT
AGACTAGTCTATAATCATTATGTTTTGTATTTGAACATCAGCGAGGTGTG
CATGATGCACAAGGCATTCGGTAGGGACTCTAGGGCGATGTGGGACTTTC
ACTGTTGCTGTAGTACAGAAGACTATCTGATGTACTACAACCAACATACT
GTCACTACTGCTCTAGTCCAGCAGACTATCACTACTGCTATACTACACCA
TATTATCCAGGGATCTACACGGTAAATTTACCGCGGTTGTTTACCGCGGT
TTTTACCGCGGTAAGGCTTACCATGGTATACCGTGGTCGTGAGATACTAT
ATACCGTACCAATTTAAAAACCGTAATGTTTTCAGAAAACCGTACCATTT
CTACCATATACCATTTACAACCGTAGTATTTTCAAAGTACAAATATGTAC
CATATACCGTTTTGAACCGTGGAATTCTTCAGCTACCATATACCGTACCA
TACACTTACCATGGACATAAACAGAAGTCTACAGCGGTAATTCATCCTCA
GTCTGAGTAATTGTGGAGGCGACTGCTGAGGGTATACTGTACAATGGTTG
TCACAATGACATCAGGTTGTCCATCGATTATACAAATATAAAATATACCA
GAAATACTGCATGTAGTAGAACACACAGCAGTTGTCACTACATAGGTACA
GGAGCATATATATACTTTATATTTTGGCGACAAATTCCGACTGTGGTATG
CATAGGAGTATTGTACTTGTCAGTGGATGATTGGTATGTGTGTAGGGTTG
GTGCATGAAGCACTTCTGAGCCAAAGGTTCAAGACAGACCAAAACCGTCG
AGAGGCTCGGGACAGCCTGGTGGCAACGGGGCCACTGGCAAAGAAGCCGC
GGGTGCTCTCCGTTATGGAGCAGCGACGCGCCAACAGACTGGCTGCCGCT
GGGAGTGCGGGTGCCGCTGGAGATGAGGCGGAGAGCGGCTCGGGGCCAAG
CATCACGCACAAGGTCCGTGTTCTCCAAGAGCTGACGAGGTATACAGCAG
AAGGGGTGGAGCTGGAAGAGGACGGATTTTCCTTGCCGGGGTTTTGGCGG
CGAAGGGGCTCCCCTAAGCTTTCCCAAGCGACAGGCGAGGTTATCGAGGA
AGCGGTTATGCCGCATCTCGCACTCCTCGCACGCCTTTACCACGGGGTCG
AGGCCACGAGCTGCCAGGCTGAGCGGAACTTTTCTGCTCTCGCTCTGCTC
ATCGGCAACATGCGGTCGAGAATGGGCGCGTTCAAGGTGGAACAGATGAT
GTTCCTGAGACTGAACCAGAGGTATATACCGGAGATTGCGGCGTATAACA
GGGTTATTGACAGGCAGCAGGCGCGCCGAAACCAGTGCAGAGAGGACACT
GGCAAGGCACAGAACGAGGCGGCCGGCGATTTGATTGAGATCGACCTGTA
GATGATGGTGACTAGTGACAGCGGGGAATACTTTCATTCGAAGCTCTTTG
GACAGTTGGTAGAGCGGGTTGGCAATAGCGCATACCATACAGGATGGAGA
GAGAGGGAGAGGGCGAGGCGCGCGCGCACGGGGGTGTAGAGTACAAACTC
ATACGTTGGTCTTAGAGCGCGTGCTTTTTTCTTTTTCAAGCCCGGTATTC
TGAGAACAAATAACGAGGTCAGTTGCATAGAAGTCCAGGACTGCGTTATG
TCAGCCCGTGTTACCGTAACCGCGCCATTTGCCTACCGCGAAGAAACAAT
GTTACCATATACCGTGCCATTTGCCTACTGCGAAGAAACATTATTACCAT
ATACCGTGCCATTTGCCTACCGCGAAGAAACATTATTACCATATACCGTG
CCATTTGCCTACCGTGAAGATTTTTTTTACCATATACCGTGCCATTTACC
TACCGCGAAGATTTTTTTTACCATATACCGTGTCATTTGCTTACCGCAAT
GTTGGGATACCGTAACCAGATACCATTTGAAAAACCGTGGTGTGGGCAAA
CGTACCATCAGATACCATATACCGTACCGTTTGAAAAACCGTGGAACTCC
AAACCGTACCATTTTCTACCATTTTTTAAAAGCGTTACCGTGTAGAACCC
TGATATTATCACTACTGCTGTACTACAGCGGACTATATAAAACTGCTTCC
TGTACTGACACTCAGACCATGTACCCAGCTACCCCACTATGCGCCGAATC
TGCACTATGACGTCCCATGTCCAAGATGGGCGACACGGCGCCGCTGTAGT
GTCGTCGTTCGGACGACCACATGCAAAGCACACTCGAACTGATTTTCCAT
CGACACGCTTGCCGTGTCCGAGCTTCCAGCATGCTCCTCTGGGACCCCTG
GACCTGCCGGTACGCTTTTTCAACTAGTTACGGAGTATATTTTTTTCGTA
TCTCGCTTACGGCCGATGGGCCTCAACGTGCTATAATAGGTTGCCAGTCC
CACGTACTGCAACGTTGCCATCCTGCCTGTGGTCACGAAGCGTCTTCCCA
TTTCATGCTTCTGCTACGGAAGCCAGAATAAAAAGGCTGATTTTGCAAGA
ATCGAACTTTCGACTCGGGCAAAAAAGAGGCGGATCGTGCATATGTATGG
TCACACATATAGCAAGAATATGGATCACGGGGTAAGGTTGCCAATCCTGC
ACGTGGTCAGCTGAACAGGGAAAACGAATATTCCCTGTCCGCGTTCGTGC
CTGAGAATATGGTCTCGCGATACGGTTTCGGCAGTTCCGTCCCGCGTCAG
CTTGCTCATCTCCATACTCAGGCTGAATCTGGTGCTTACTTACGGGATTC
CTCCCGAGTTCCGCGGCGGCATCCATTTATGAAACCGTCATACGCCATCG
GGTCAGTCCCGAGTTTATCGGGTCACGCAATTGCGTACCGATGGCGTTAC
TGCCGAGAGTCCGCCGGCACAGGGCCAGTGGACCTGAAGGTAGTTCCGAA
CGAGTGCTACCTTAGCAGGTCACCATGGACCAAATCATATACGCCTCTCT
TTCCCACACCCACTATTGGTATGAAGTATTTGATTGATGGATTGATTGAT
TGATTCACACATTCAGCGTAATGTCCTTGCAACTGAAGAAGCTACGGTGA
CACAACAAGTCAGCCATAGACCTATCAAACGTCATTCCCGCTTGTGGTCA
CAAAGAGGTATCAAGGTCAACGGGTCACATCATGGTGACAATCCGCTACT
CAGACCAACAGGTATCCAAATCGCGGCAAAAAGCTATGTGACTCTACAAG
CAATAGCTCACTGACCAATATCAAAACGGTTCATCAAACTTCCTGACTCC
ATATCAAGAGCAGCCTCGACCGACTCAGATTCTTGTCGCCTACCCAAGAC
CAGCATTCTCAGCGTCAAACCGGACATCTAACCCTCCAACCAGTTTTGAT
CAACAAGTCCAAGTTTCTCAAGACCACACGATCGTACAGAAATAAGGAAA
ATTGAAATACCGAGGTCCATGGTGGTGGAGGCCTTGAGCTGGTGAAGCCA
GCGCGCGAGCCAGCATCCAGCCGTCCAATGCCCTGTGCATCCCTGAAAAA
GCCTCACGAATCTTGCCCGTTTGCCGCTCGTTGTGGCCCTCGTAGGAAGA
AAAATGACCGTGGCCAGGCATCAGCTTTTCCCTCAGAAACCTCCCGGTTC
AAGCCTGTGATTCTCGCGCACAGGGATTCAGCTCTCCCCTGACTCGTCGA
CGATCGAGCCGCCCTCCGCCTTCGCCTAATCTGGTGCGTACCCACCCGAT
AGTGCACTACGAGGCTCTCCACGACAGTGCTCCCTGCCTCTCGCGTGCCG
CCACCCTCCCGAAGGCCACCAAATTGGAGCTCGGAAGGAGCGCACACCTG
ATAACACCATCCTCAGCCAACCATACCGCCGCCCCGTCTCAACCGAAAGG
TTGAATCGCGAAGGCAGCCAGTTGGTTGCATCTCTTGAGGGTGAGCCCGG
CCCTATACCCGCCGGAAAGACCTGTAGTAGAGTGATGATGTCGACTCTAT
TTTCAAGTAGTTCACAGCAACACGTGGAGGGTAGGTAGCAATGTGATGAT
GTCAAATGCTTTTCAACAAGGCAACCATCTACCGAGTTCTTTGGCAAACA
CACGCACCCATTCATCCCAAAACTATCTGATGTCATGTTGCATTGGTTCT
ATTCGAAATCGAGTTAGTCTCTGCCACTTAAGTCAAGGTATCTGTGCTGT
TCCTCGCCGTACACACACAATTAATAGCTCGTTTTGCGACAATACAGTTG
AATTTCGGGATGGTGCTCGCTCGCCATGGGTTCTCTGAACGCCGGACTTC
GCCTGGGAATGGTGGTGAGATGCGCCTTTGGTGGCCTGTACCCTAGATCT
AGACTTGCGCGACACTCACACGGTAGATGCCCTGAGGTGTTCCTGCCTAT
GGTGATTCGGGCTCCCATAACCCCGCCGCACTTATTCGATCGGCATACTT
TGGCCATGGATACTTTTATTGATATCGTGGGACAGAGTTAAGAAAAATCT
TATAGCATCTAAAGCTCCTGAGCAATCAGAAAGTGTAGGTGGGAATATTG
AATATTGGCTGTAAGGACAAAAGCTGGTATGGAAACACAAGACTTTGTAT
ACCTCTGCAACGTGCAGTGATACAGCGGGGCCTACCTCCGAGGTGGTCAC
AGCTATCCCAGATAGCGTGAGCCAGCGAAAAACATCATTTGTTTCCACGT
GAGAAAGAGGCGTTTCCCGGCAATACTGATGTACTATATCCATTATTTGT
ACCAGTACAGACAACGACTGCAATTCAAGGTTACAAAAACAAGTACAACT
TAATTTCATACCCAGGATTTTGATCACCGATATCGACTCGATTCTGATCT
GTCTAACCGACCCACACTGTACACTATGAACACTTCACACCACACCATCT
CCAGTGTTGCGCTACTGAGATGGTTGAGGTGTGCGTGACTACACAGTGGT
AGTACGGATGAACCCGTGTGGTTCGGGGTGGTTCTGCGGTATCAACCTCC
GAAGTTGTCATGACGGCTAATGGGAAGTCTCTTGACCAAGCAGGGTCTGT
TGCAGAAGAGGTAGTGCTGGGCTCGGGTTTGGTGGATGGTAGTGGGTGGT
CACAGGATTATTGGAGGAGATGCATTGAATCTCGTTTTTATCTTGTCTCA
GTACCCCAACTCATGGGCATGCTCTTGTAACATACAGTATGCTCTTATAG
ACAACCGTACAGTCAGTACAGTTGATAGAACGGGTAGAACCATATAACTC
AGACAACCATAGAACTCAACTGTTCAACTGTTCAACTGAATCAGTAGGGT
CTACGAAAAAGACAGCCAACTTTCTAATTTACACCGCGTGTTGCTGTTCG
GCGAGTAACCTAACTTGTCACGCTTTCAGCGGCGACGTCAACACGACGAT
TTACGTCAACTAGTATTTTGGTTCAATGTCAGATTAACCACTATAATAAC
CTTCCCAGGGAACCTATGCTGATCCCGGTTCGCGGTTGTCCACGATGGTC
ACGCCCTGACCCACAAGCTGTGTCCTGCTCCACGTCCTGGGGTGGCTCGA
GGGTGATGACCAAGTGTAATGGAATAACAATCTAGCAAATTCCACGTATC
GGCCTACAAGCCCACAAATCATTGCAACCCGGCACCACTGTTAGGCCTAT
AGCAGAGTATTGATTAACCCGGTAAATTTGCCAATCCTGCTCGTGGTCAG
CTGAACAGGAAACATGTATTTTCCCTTCTCCCGTTCGCGCTTGACAATCT
GATCTCGCGAGACAGGTTCGACCGTCGAGTCCCGCGTCCGCCCGTTCATT
CTCCAATATTAATAAGGCTGAATCTGGTGCTTACTCGCGGGATTCCTCCC
GCTTTCCGCGACGGCATCATCCATTTATCCTTTATTTATACCGTCAACCG
CCATCGGGCCAGTCCCTATTAGAGTGTATCAGGCCACGCAATTGCGTACC
GATGGCGTTCACTGCGAGGCCGCCGGCGCAGGGCCAGTGGTCCTCAAGTT
AGTTCTATTAATATTAATATACTGTATAATAGTAACGTGTGCTGCCTTTT
CGGTATCATCACTCATTAGTCTATGGACCTTTGTTTTGCGCTTCTCTTTT
TCCGCACCCACTAATGGTATGCATATAATGGTATCTGTATATATACCGGT
ATAATATAGTGGACATGTGTGGTACAGAAGGTATCGGGCGAAAGTTTGCA
ACAATTCTGTATTTTTAGAAAATTTGAAGGCATCCAAACGTGAAACCTTC
CCAGCGTCCACAACTTCCGTTAGGGAGAACTGTGTCGAAACGTTTGATTG
GGAACATGGCCTGTTAGCACGAAAAACTCTACTACATGGGATTCAGTCGG
GTTCTCCAACGATCGTCGCTTAGCCTCAACAGTACAATATCGGGGAGAAA
CCCAGCGTACACTCATCACCATGTTGGGACACAAGAAAAACAGAGACGCA
AAGCAGGACACACGCCATCGGTCCTATCGTACAAGTATGCTTCACACGGC
TGCACAGGCCTATCTGTAAAAGCACATGCCCACCACCCAGTATAGGTAAT
GGGTGTGGGAAAACAGGGGCGCGTATTAATTGGCCCGTATTAATTGGCCC
ACCGGGCTGCTGAAAAGACAGCAGTACCTGTACCCGTTACTCGAGCTACC
TTTAGGACTACTGGACCCTGTGCCGTCGGACTCTCGGCGATGAACGTCAT
CGGTACGCTCCTGCGTGATCTTATATGCTGGGGACTGACTTGATGGTATA
GATGGACGCCGTGACAGAAAGCGGGAGGGAGAAGAGGAGCCCGTGAGTAA
GCACGAGATTCATCTTGGGTGTGGAGAATCAGCGGGCTGACGCGGGACGA
GACAGCTGAACGTGTCTCGAGAGACCAAACTCAGGCATGAACGGGGACAG
GGAAAATAAATTGTCCCTGATCAGCTAACCACAAGCAGGGTAATCGGTAA
CCATAATCTGACGACCAACATGATGTCTGGTCTGCTATATCTGATGAGCA
CCACCACCATCAAGCATGTATGTATTCTGTATGAATCTATATATGTACGT
ATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTATGTTTGGTC
ATTATTATTGCAGAGTATGGATGAACCATGGTATAGTTGCCAATCCTGCT
CGTGGTCAGCTGAACAGGAAGAATGTATGTTTCTTGTCTCCGTACGCCCC
CTGATAATTTGGTCTCAAGAGACGGGTTCGGTCGCCTCGTCCCGCGTCAG
CCCGTTCATCCTCCACACCCAGGCTGAATCTGGCGTTTGCTCACGGATTC
CTCTCCTTCCCGCTTTCCGCGACGGCCCCCTTCTATACCGCCAACCGCCA
TCATAGATAGGGTCAATCCCGAGTTTATCAGGTCCCTTAGTTGCGTACCG
ATGGCGTTCATTGTCCATCCCCGAGAGTCCGCCGGAAGAGGGCTAGTAGT
CCTCAAGGTAGCTCATGTGACGGGTGCTATTCATGCTTATTCAGGTGACC
CCATGGACCAGTTGATGTGCGCCTCTCTTTTTTCGCCCCTACTATTGGAA
CAGTGACCATGTGCGATGCACAGACAGTATCGTAAGAGATGGACGAAAAT
GGATTATGCAGCTGTAGTACTTGTATCACACGGTCAGACGCGGAAGCAAA
AGCCTTACATGCCCTCCCCCATCACCCGTTCGATTAGCCGATATAAGTTC
TTGCCTGTGTCGAATCCCATTGATTGTACAATAGTTTGTCGATCTATCGC
TCGCTATATATTTCCTGAGTTTCTGGTTCCCGCTCTGGCCCGGCGTTTTC
AGCAGGTTGCTACGGCTGCAATGAGGCGCTTTATCTACTGCGCACTCGCT
ACGATAGTATTCAGAATAAGTGCTGTGCTGGCGTCTGACTTTGAGACAGC
GTTGAATCTCATCGTCAAGCACCACGGCAATGACGTCAAAGGACTTTCAC
ACACGCTAGAGAGTCTCAAGCACATCGCCACTCGGCTGAACGACGAACCG
CACATCGCCAAATATCGGACGATACGGATGCTGAACAAGACTTTCTGGGA
GAGGGTCGGCAGGGTTGACGGGGGCATTCCTTTCATGGTGGCTCTGGGAT
TCGATATCGTCGACCAAGGTGAGTTATGCCCCGTACAGTCGGAGGATAGC
TCTAAAGCTGAAGAGCTATTAAAATATAAGTCTTGAGAGTGTGCGCCACC
TATTTTTGTATTCCATTTGCCCGAGTGGTCTAGTAGGTAACCTGCACACC
TTCTAGTGCGGAGATCGTGAGTTCGATTCTTGGCTAAATCAGTATTTTAA
TTCTTGCTTCCGTAGCTGAAAGCGTGAGAACGTGAGTAGGTGAAATTCAA
CCATTGGTTGACGAGTGAACTTGCATCGCGATAAAAATCGTAAGGCGTGA
ACCGGGGAGATATGGGAAGATCCTTAGGGACCACAGCAGGATGGAATGAG
GCCCATAGGCTATAAGTGAGATGGAAGAAAAAATAAGAAAAAAAGCCAGG
TACACATTCTACTCGGATTTTCTCTTACAGGTAATTGTAGCGCCCTCACT
TCATAGTATTTTTTGTCGGTCAGGTGGGGAACCTGCTTTTCACACTCGAA
AAGGTGCCCCAGTCAAATCGGACCTCATCCGAGCTTTGAGGCTTCTCTCC
GCCCAAGAGGCATTATCCACTGGGAGTGCGGTAGATCGAGAGCTGGTTGA
TGGTGATGCTAAAATGGATATGTCGGGAACATCTTTGAAAGCGTTGGACA
CATCCGGTGAGATGTACCGTACCTAGAGTAAACAGGAAAGGTGAGGCGCG
ATCAGGTTCGGGCACGCCAATATCGCAAGACTGACTTGTACATTATGCTG
CGGTTGTGCATGGCGTGTACCCACTTCCATCGGTCCGATCAACATCCAAT
GTTACCTCACGTTCGAAAGTCTGTGACCATCGCATCCGCGTTTCGTCCCG
ACACCCGTCCCGAATGAGTGTACCGTACGCGAATGACGTTACAGCTTTCC
GCATCCAGATATTTTTACTCCTCTCTCAAGGACAGAAAATTGTCCACTTA
TAGTCAGCGGCGGTCAAATCTCAATGTGACTTTCTGGATGTAATATCAAT
ACAGGTAGCATGTTTTGTCCTCATCGCTCGAGCTTGAAAAACAGCCAGAT
GAGGGTCACCGCTCCGATATAGCTTTGATAAAGTGTAACATGTAAACGCT
TCAACCAGTTAGCGCTTACAAGTACAAGAGCGATTTTAATGAGAGTCAAA
CAATTCTACATTTTTTTTTCATCGCTGCCCTACGCCGATGCATCAAGATT
TACGCTTGAGGTGCGCACGGTCGAGTCTCATTCGGAAAAGTTTGAACGAC
AAGTAGAATTTCTGTCATTATTTCGATGGAATCATTACCCGTTTGGTCTG
TGAATGCAGTCTGTGCGTCAACTTGCATGTGCAACCAACTGTCACTCTTG
CTGATGATCATGAACAATCAATCACCGAATCGATACGTAAATGCATTGTT
CTCTGCATGGACTTCTTGCGCAGCTCACTTTCATTTCCCTTCCTGGCGAC
ACCAAAACTAACTGCTTTGCCCAGGATTTAACCCTTTCGCGACGGTGTTC
TCTCGAAAGTCACGCACGCGGGTGCAGGACCGCCTGGAGAAAGAACTCGC
CAGCCTCGCAGAGCGCCAGGCTAGTGTACAGCAGCGGTTCTCAGGGATTG
GAGATCGAAACATTACTTTCTTGTTGCCGAGGCCGACTTCGCGCAGGGTG
GCCGATGAGCACGAACGCGACAGCGTTGGAGGTGGAGACGACAGAGACTT
GCAGGAACGCTCACTTGCACTAGTGTCGCAGGTGTCGCGAGAGCGAATAG
CTCGGGAAGAGCTCCGAAGATTTGAAACTCGGGCAGCGAAGGAATTACGA
TTACTACGCACTTCGAAGGTGTACTCTTATGTGCTGGTGCGCGTGCGACT
GCCATCGGGGGTATACATCCAGGGCCGCTTTAACTTAGAGGAGACTTTGG
AGGTGAGGGCCTGCGTCTTTGTGCTTAAGCGTTCTGCCACTGCTATATTA
AACTTGGAACTCAAACGAAACGCCTTCTTATACACCCCTATTTCTAGCTC
TCAGTCGTCAGGTGTCCTTTGTGATCTTTGGTTGTTTTTACCCATTCATT
CGTGGGTCAAGTCGCAAGAAAAGGCGCGCTTGAATGCAAACAAGCACAAC
TGTATCTCGAAGTAGTTTATCATCCCGCGGGAACATGGCACTTCTTTCGT
GCGGACTGTGGCGGCCATTTCTTACATTTGTTGGTCGGTCCCAGGATGTT
TATCACGTGCTGGAACAAAGTCTCTCGGAAGAGGCCGGCGTGGAAAGTCC
TGCAGATCAATCTTGTCTTGGGTTCGAGCTCTACATGGCGCCAGCGACCC
GCGTGCTCCCCCGAGATAGCACCCGCCTCAAGGATGTGAATGCTGGAGCT
CCTGCTTGTATGTTACACCTCCGGTGGCAAGGCGAGGGGTCCAACGCGGA
GCTTTGGGCACAAAAGCTTGAAGCAAGCAAGGGACGGATCACGGGCGGCT
CTGCTCGCGCGTGGTTGCCATACGCTCCCAGGTATTGCAAAAACATGCGG
TGCTCCCTCCCCTTGAAACTGTCGCCTTCGAAAAAAATATTGCATTATTT
CCTTATCGCCCGTATGTCGCCCGTTCGTCATATTGAAAACTGGTTTGGTC
CCAATCTGAAATGTTCCACCCGTGGTCTGCCGTCTAAATTAGGCACGACC
TGCCCGAAGCATGTTCTCCGAAACGGCCGACGAATCCTCCTCGAGCCGAA
AGGAGGAGCTCTCCTGTCGATGACGGCGAGGATCTTGAGAGTACTGCGGC
AGATTCTTCGGAGTTCTTCGAGAAGACGTTGAACTGTAGATTGGAGTAAT
ACCTTTTGTTCGATGGTCGGATAGGACGGTTGTTGCAACCGATCATGAAA
GTAGTGAAGTCGAAATACAGATTGTGTCATTAGTAGACAAGGGTACAAGT
ACGGCTGTGATTTGATGCAACATTTATTCCAACCGTCCCCTTGAACAGTT
AAACCAGTGCCGTAATGTTGAACTGTAGAGCTATCCGCTCTGCAAACCCG
CAAAATAAGACATTTTGTTGCACATCCTATGTAGTTAGCGCCTGACTCGC
TCCAGCCCGGTTCGCGATTCATGGTGACGCCGACGTGACCATCAGGTGAC
GGAATGTTAGCGGACGACCCATTCTAATAGTGATTTGATCCGCTAAAATA
AGTTGAAAACCTTTAAGCGGGGGAACCTCGCTTGAAGTAGGTCCTGAAAG
AAATAGTTGTGAAGTTTCGAACGGAATGAGGATCTGACCCGAAGGCGAGC
CCGACCCCGAGGCGCACAAGTACGAATACAAGTCAAAAGACAATATGATA
AATAACAAAATGGTCACCGCTCGATTATGCATAGAAAAGTGACTAAAAAT
TGCGCGCGCTTCTTCGTGTTGATGTGTTTTTAAAGACGCCGCAATGTACA
GGATAGCAGATTGGAGCAAGAGAGCAAGAGGTTCAAGCTCAACGTATCGT
GGATTAACTGTTAATAAATAATGTTACTGTATATTAAACGCATGTAC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig825:208382..220328+ >mRNA_F-serratus_M_contig825.19651.1 ID=mRNA_F-serratus_M_contig825.19651.1|Name=mRNA_F-serratus_M_contig825.19651.1|organism=Fucus serratus male|type=CDS|length=2706bp|location=Sequence derived from alignment at F-serratus_M_contig825:208382..220328+ (Fucus serratus male) ATGAGGCGCTTTATCTACTGCGCACTCGCTACGATAGTATTCAGAATAAG TGCTGTGCTGGCGTCTGACTTTGAGACAGCGTTGAATCTCATCGTCAAGC ACCACGGCAATGACGTCAAAGGACTTTCACACACGCTAGAGAGTCTCAAG CACATCGCCACTCGGCTGAACGACGAACCGCACATCGCCAAATATCGGAC GATACGGATGCTGAACAAGACTTTCTGGGAGAGGGTCGGCAGGGTTGACG GGGGCATTCCTTTCATGGTGGCTCTGGGATTCGATATCGTCGACCAAGAT GAGGCGCTTTATCTACTGCGCACTCGCTACGATAGTATTCAGAATAAGTG CTGTGCTGGCGTCTGACTTTGAGACAGCGTTGAATCTCATCGTCAAGCAC CACGGCAATGACGTCAAAGGACTTTCACACACGCTAGAGAGTCTCAAGCA CATCGCCACTCGGCTGAACGACGAACCGCACATCGCCAAATATCGGACGA TACGGATGCTGAACAAGACTTTCTGGGAGAGGGTCGGCAGGGTTGACGGG GGCATTCCTTTCATGGTGGCTCTGGGATTCGATATCGTCGACCAAGGTGG GGAACCTGCTTTTCACACTCGAAAAGGTGCCCCAGTCAAATCGGACCTCA TCCGAGCTTTGAGGCTTCTCTCCGCCCAAGAGGCATTATCCACTGGGAGT GCGGTAGATCGAGAGCTGGTTGATGGTGATGCTAAAATGGATATGTCGGG AACATCTTTGAAAGCGTTGGACACATCCGGTGGGGAACCTGCTTTTCACA CTCGAAAAGGTGCCCCAGTCAAATCGGACCTCATCCGAGCTTTGAGGCTT CTCTCCGCCCAAGAGGCATTATCCACTGGGAGTGCGGTAGATCGAGAGCT GGTTGATGGTGATGCTAAAATGGATATGTCGGGAACATCTTTGAAAGCGT TGGACACATCCGGATTTAACCCTTTCGCGACGGTGTTCTCTCGAAAGTCA CGCACGCGGGTGCAGGACCGCCTGGAGAAAGAACTCGCCAGCCTCGCAGA GCGCCAGGCTAGTGTACAGCAGCGGTTCTCAGGGATTGGAGATCGAAACA TTACTTTCTTGTTGCCGAGGCCGACTTCGCGCAGGGTGGCCGATGAGCAC GAACGCGACAGCGTTGGAGGTGGAGACGACAGAGACTTGCAGGAACGCTC ACTTGCACTAGTGTCGCAGGTGTCGCGAGAGCGAATAGCTCGGGAAGAGC TCCGAAGATTTGAAACTCGGGCAGCGAAGGAATTACGATTACTACGCACT TCGAAGGTGTACTCTTATGTGCTGGTGCGCGTGCGACTGCCATCGGGGGT ATACATCCAGGGCCGCTTTAACTTAGAGGAGACTTTGGAGGATTTAACCC TTTCGCGACGGTGTTCTCTCGAAAGTCACGCACGCGGGTGCAGGACCGCC TGGAGAAAGAACTCGCCAGCCTCGCAGAGCGCCAGGCTAGTGTACAGCAG CGGTTCTCAGGGATTGGAGATCGAAACATTACTTTCTTGTTGCCGAGGCC GACTTCGCGCAGGGTGGCCGATGAGCACGAACGCGACAGCGTTGGAGGTG GAGACGACAGAGACTTGCAGGAACGCTCACTTGCACTAGTGTCGCAGGTG TCGCGAGAGCGAATAGCTCGGGAAGAGCTCCGAAGATTTGAAACTCGGGC AGCGAAGGAATTACGATTACTACGCACTTCGAAGGTGTACTCTTATGTGC TGGTGCGCGTGCGACTGCCATCGGGGGTATACATCCAGGGCCGCTTTAAC TTAGAGGAGACTTTGGAGGATGTTTATCACGTGCTGGAACAAAGTCTCTC GGAAGAGGCCGGCGTGGAAAGTCCTGCAGATCAATCTTGTCTTGGGTTCG AGCTCTACATGGCGCCAGCGACCCGCGTGCTCCCCCGAGATAGCACCCGC CTCAAGGATGTGAATGCTGGAGCTCCTGCTTGTATGTTACACCTCCGGTG GCAAGGCGAGGGGTCCAACGCGGAGCTTTGGGCACAAAAGCTTGAAGCAA GCAAGGGACGGATCACGGGCGGCTCTGCTCGCGCGTGGTTGCCATACGCT CCCAGGATGTTTATCACGTGCTGGAACAAAGTCTCTCGGAAGAGGCCGGC GTGGAAAGTCCTGCAGATCAATCTTGTCTTGGGTTCGAGCTCTACATGGC GCCAGCGACCCGCGTGCTCCCCCGAGATAGCACCCGCCTCAAGGATGTGA ATGCTGGAGCTCCTGCTTGTATGTTACACCTCCGGTGGCAAGGCGAGGGG TCCAACGCGGAGCTTTGGGCACAAAAGCTTGAAGCAAGCAAGGGACGGAT CACGGGCGGCTCTGCTCGCGCGTGGTTGCCATACGCTCCCAGGCACGACC TGCCCGAAGCATGTTCTCCGAAACGGCCGACGAATCCTCCTCGAGCCGAA AGGAGGAGCTCTCCTGTCGATGACGGCGAGGATCTTGAGAGTACTGCGGC AGATTCTTCGGAGTTCTTCGAGAAGACGTTGAACTGTAGATTGGAGTAAG CACGACCTGCCCGAAGCATGTTCTCCGAAACGGCCGACGAATCCTCCTCG AGCCGAAAGGAGGAGCTCTCCTGTCGATGACGGCGAGGATCTTGAGAGTA CTGCGGCAGATTCTTCGGAGTTCTTCGAGAAGACGTTGAACTGTAGATTG GAGTAA back to top
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