prot_F-serratus_M_contig823.19625.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig823.19625.1
Unique Nameprot_F-serratus_M_contig823.19625.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length572
Homology
BLAST of mRNA_F-serratus_M_contig823.19625.1 vs. uniprot
Match: A0A6H5JSB6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSB6_9PHAE)

HSP 1 Score: 261 bits (668), Expect = 1.110e-74
Identity = 219/602 (36.38%), Postives = 269/602 (44.68%), Query Frame = 0
Query:   17 MPRNVTGVKANAGNRKKKWERRKNGHAKEKTAPHILAALEAQRARSAAQQRVQSAPQPAQNDHGKDTARPRHLPSSTATQQLA-PGALPGFVFDPTRNRYFRAVKNPLGNPAERRSTKRKMMPIVLNVPDRDNPHGDRSCGGPPDSSVDVRPQPAATAVASVLR-ELRDAETTTRG---------------------------------RGLHSYAMAKRRGFWGRCGALASPGVSALKSLAGPPAPPERSRRLAVESIVSSSRFCARPCDAWM------GRGACSAIDWDPASGVVVVGTSSGEIGIRQ--ATPDPWSGDSFDESFTH-----GGSLRVDEGIVQWISDPS-RSEVSDVKLQSFGDRWAVATAFLGREGEAGGVTATVVPFGGGDRGWS-RVHTALRDPHARVTRKQVQHGSVWCLDWDPSTPGRLAFGPSACCPVSLFDVESAVLTPVARLTSDVFSICFLPLGAPGGGDVMVCGLRDGSVRLVDTRQPPRANPAAEAAAPTTLTTKMCATARIDIARRKNHHRGVRAPVPPSMVGKIISVKLD-SSVDHTHVLRDGTRCLVRHRFGGLHAVDLRFTGR---PLRALVEP 564
            MP + T  K   G  KK   RR N     +TAPHILAALEAQRAR A     Q  P P                          P ALPG +FDP RNRYFR VK+  G P            +V +   + N    +  GG   SS    P PA T  +   R E R       G                                 RGLHSYAM+ RRG WG             +   G PA PER RR+ +ES VSSSRF  R    W       G G  SA+DWD   GV++ G  +G + +    A  +   GD  D          GG+ + +E ++   +    RS+VSD+K +  G  WA ATA LG  G+ GGVTA         R W+ R          R+  +Q+  GS WC +WDP TP RLA GPS C PV  FDV+   + PVA+L+ DVFS+ FLP  APG G+ +VCGLRDG+V LVD RQP R                               HR       P+  G +++ + D SSVDHTH+LRDGTRCLV+ R G L   DLRF G     L  LV P
Sbjct:   33 MPPSNTNNKNRRGTGKK---RRNNRSRPAETAPHILAALEAQRARIA-----QQVPAPXXXXXXXXXXXXXXXXXXXXXXXXXLPQALPGHMFDPARNRYFRCVKDCQGTPGT----------VVADSKSKQNLRS-KIGGGKSKSSGPPTP-PARTGSSKASRGESRSNFVANHGGNGRSYVAAAASAGCPADAAPRTGHLDIGSVGRRGLHSYAMSSRRGLWGW--------DDRTRRSCGLPARPERLRRIGLESAVSSSRFRVRDHVPWAHTSVIHGAGY-SAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGGGDGGDAQLRGFAPRWGGARKEEERVLLTAASRRWRSQVSDIKFRGHGAEWACATASLGDGGQPGGVTA---------RFWTGRGDLVNVFSEGRLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRVIPVAKLSGDVFSMSFLPAAAPGAGNALVCGLRDGTVVLVDPRQPYR-------------------------------HR------TPAAAGTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFFGHRGGALEVLVPP 559          
BLAST of mRNA_F-serratus_M_contig823.19625.1 vs. uniprot
Match: D8LEC8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC8_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 2.610e-62
Identity = 153/394 (38.83%), Postives = 194/394 (49.24%), Query Frame = 0
Query:  198 MAKRRGFWGRCGALASPGVSALKSLAGPPAPPERSRRLAVESIVSSSRFCARPCDAWM------GRGACSAIDWDPASGVVVVGTSSGEIGIRQA-----TPDPWSGDSFDESFTH--GGSLRVDEGIVQWISDPS-RSEVSDVKLQSFGDRWAVATAFLGREGEAGGVTATVVPFGGGDRGWS-RVHTALRDPHARVTRKQVQHGSVWCLDWDPSTPGRLAFGPSACCPVSLFDVESAVLTPVARLTSDVFSICFLPLGAPGGGDVMVCGLRDGSVRLVDTRQPPRANPAAEAAAPTTLTTKMCATARIDIARRKNHHRGVRAPVPPSMVGKIISVKLD-SSVDHTHVLRDGTRCLVRHRFGGLHAVDLRFTGR---PLRALVEPPAALKLVP 572
            M  RRG WG             +S  G PA PER RR+ +ES VSSSRF  R    W       G G  SA+DWD   GV++ G  +G + +          D   GD+    F    GG  +V+E ++   +    RS+VSD+K +   + WA ATA LG  G+ GGVTA         R W+ R         AR+  +Q+  GS WC +WDP TP RLA GPS C PV  FDV+     P+A+L+ DVFS+ FLP  APG G  +VCGLRDG+V LVD+RQP                                +H G  A       G +++ + D SSVDHTH+LRDGTRCLV+ R G L   DLRF+G     L  LV P    K  P
Sbjct:    1 MRSRRGLWGW--------DDRTRSSCGLPAGPERLRRIGLESAVSSSRFRVRDHAPWAHTSVIHGAGY-SAVDWDAGRGVLIAGRKNGGLAVMMTGAPMNVGDGGGGDAPLRGFAPRWGGVRKVEERVLLTAASTRWRSQVSDIKFRGHAEEWACATASLGGGGQPGGVTA---------RFWTGRGDLVNVFSEARLVDQQLHRGSAWCTEWDPLTPARLAIGPSTCSPVVFFDVDQQRPIPIAKLSGDVFSMSFLPAAAPGAGSALVCGLRDGTVVLVDSRQP--------------------------------YHHGTAAAA-----GTLLAPRADPSSVDHTHILRDGTRCLVKDRSGCLQVTDLRFSGHRGGALEVLVPPGGQGKRAP 339          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig823.19625.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JSB6_9PHAE1.110e-7436.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LEC8_ECTSI2.610e-6238.83Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 363..507
e-value: 3.5E-8
score: 34.9
NoneNo IPR availablePANTHERPTHR44472FAMILY NOT NAMEDcoord: 100..137
coord: 383..483
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 258..561

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig823contigF-serratus_M_contig823:62513..67252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig823.19625.1mRNA_F-serratus_M_contig823.19625.1Fucus serratus malemRNAF-serratus_M_contig823 62511..67252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig823.19625.1 ID=prot_F-serratus_M_contig823.19625.1|Name=mRNA_F-serratus_M_contig823.19625.1|organism=Fucus serratus male|type=polypeptide|length=572bp
CSLRGAHSLSSFLCIEMPRNVTGVKANAGNRKKKWERRKNGHAKEKTAPH
ILAALEAQRARSAAQQRVQSAPQPAQNDHGKDTARPRHLPSSTATQQLAP
GALPGFVFDPTRNRYFRAVKNPLGNPAERRSTKRKMMPIVLNVPDRDNPH
GDRSCGGPPDSSVDVRPQPAATAVASVLRELRDAETTTRGRGLHSYAMAK
RRGFWGRCGALASPGVSALKSLAGPPAPPERSRRLAVESIVSSSRFCARP
CDAWMGRGACSAIDWDPASGVVVVGTSSGEIGIRQATPDPWSGDSFDESF
THGGSLRVDEGIVQWISDPSRSEVSDVKLQSFGDRWAVATAFLGREGEAG
GVTATVVPFGGGDRGWSRVHTALRDPHARVTRKQVQHGSVWCLDWDPSTP
GRLAFGPSACCPVSLFDVESAVLTPVARLTSDVFSICFLPLGAPGGGDVM
VCGLRDGSVRLVDTRQPPRANPAAEAAAPTTLTTKMCATARIDIARRKNH
HRGVRAPVPPSMVGKIISVKLDSSVDHTHVLRDGTRCLVRHRFGGLHAVD
LRFTGRPLRALVEPPAALKLVP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf