prot_F-serratus_M_contig126.1960.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig126.1960.1
Unique Nameprot_F-serratus_M_contig126.1960.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length108
Homology
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: D7G768_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G768_ECTSI)

HSP 1 Score: 110 bits (275), Expect = 2.200e-28
Identity = 62/97 (63.92%), Postives = 76/97 (78.35%), Query Frame = 0
Query:    6 VQGVSLAGMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEEKLTT 102
            VQG SLAGMF+VNAVMLS +LKAL++SGSTVATVTN +TNF+LSG+ GRM+FGE L  LW  GASLVVSGV+L+  G+S +      +R K E LT+
Sbjct:   68 VQGASLAGMFMVNAVMLSTFLKALQMSGSTVATVTNFSTNFVLSGISGRMVFGERLPALWFFGASLVVSGVVLLTGGSSPEG-GKTSERIKGEGLTS 163          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: UPI00142586A9 (transmembrane protein 42-like isoform X2 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142586A9)

HSP 1 Score: 67.8 bits (164), Expect = 7.090e-12
Identity = 36/89 (40.45%), Postives = 65/89 (73.03%), Query Frame = 0
Query:    2 VRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVA 89
            + + +Q +S AG+F+ NA M ++++K+L++S ++V ATVTN A+NF  S ++G ++FGE LS  W  G+ ++VSG++L+   ++ KTV+
Sbjct:   70 ISIYLQVMSFAGIFIFNAFMWTLFVKSLQLSKASVQATVTNSASNFFFSALIGHLVFGEALSIRWWIGSMMIVSGLILMQRASA-KTVS 157          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A1Y1YT04_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YT04_9FUNG)

HSP 1 Score: 67.0 bits (162), Expect = 9.600e-12
Identity = 37/80 (46.25%), Postives = 53/80 (66.25%), Query Frame = 0
Query:    1 MVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLV 79
            +V L+++G+ L G+FL NA+M +M+ KAL  S S+V  TV N  TNF  +   G ++FGE LS  W CGASL+  G +L+
Sbjct:   60 LVYLIIRGLCLGGIFLCNALMWTMFTKALNSSKSSVQVTVLNSVTNFCTTAFCGHVVFGEPLSLKWWCGASLIAVGSILM 139          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: UPI000719CFA6 (transmembrane protein 42-like isoform X1 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CFA6)

HSP 1 Score: 65.1 bits (157), Expect = 4.420e-11
Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 0
Query:    2 VRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEEKLT 101
            + L V+G     +FL+NAVM +++ KAL +S +T+ AT+TN A+N   + + GR+LFGE L   W  GA L+V+GV L+         A D +R  + K +
Sbjct:   49 ILLYVRGSCFLLVFLLNAVMWTVFTKALRLSPTTLSATITNLASNLFFTALTGRLLFGETLGATWFVGAGLIVTGVALI------HNAAADAEREAQRKTS 143          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: V4ADD2_LOTGI (Uncharacterized protein n=1 Tax=Lottia gigantea TaxID=225164 RepID=V4ADD2_LOTGI)

HSP 1 Score: 64.7 bits (156), Expect = 6.230e-11
Identity = 31/76 (40.79%), Postives = 53/76 (69.74%), Query Frame = 0
Query:    4 LVVQGVSLAGMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLV 79
            LV++GV L  +FL NA+M + + K+L+   S  AT+TN +TNF++S ++G++LF E L  LW  G+  ++ G++L+
Sbjct:   53 LVIRGVCLIAVFLSNALMWTFFTKSLQYLSSIQATITNTSTNFLVSAIIGKILFKELLPILWWIGSVFILLGLLLI 128          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A087UXV3_STEMI (Transmembrane protein 42 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UXV3_STEMI)

HSP 1 Score: 63.5 bits (153), Expect = 2.350e-10
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 0
Query:   14 MFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKE 97
            M L NA+M +++ KAL I  +T+ ATVTN A NF  + + G++ FGE LSFLW  G  L+++G++++     +   +  + R K+
Sbjct:   73 MLLSNALMWTLFTKALRICSTTLEATVTNTAANFFFAAIYGQVFFGESLSFLWWMGTMLIITGLIIMHRSNQETVASPPVIRKKK 157          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: W4H3N1_9STRA (EamA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3N1_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 3.830e-10
Identity = 32/85 (37.65%), Postives = 51/85 (60.00%), Query Frame = 0
Query:   12 AGMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSK 96
            A M L NAVMLS +++ L  + S  AT+T+ A NF+++ ++G ++F E L   W  GAS+++ G+ L++ G  D     D K  K
Sbjct:   62 AAMLLSNAVMLSFFVRGLHETDSLTATITSSAANFVVTALVGYLVFHEQLPLQWWVGASVILFGMGLLLHGAKDDITTDDSKAKK 146          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A3B5AHU2_9TELE (Transmembrane protein 42-like n=5 Tax=Pomacentridae TaxID=30863 RepID=A0A3B5AHU2_9TELE)

HSP 1 Score: 62.0 bits (149), Expect = 7.890e-10
Identity = 37/76 (48.68%), Postives = 52/76 (68.42%), Query Frame = 0
Query:   14 MFLVNAVMLSMYLKALEI-SGSTVATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTV 88
            +F+ NAVM + + KAL + S S  ATVT  A NFI SGVLGR++FGE  + LW  G SL + G +LV+ G++ +T+
Sbjct:   67 LFICNAVMWTFFSKALRLCSSSARATVTTTAANFISSGVLGRLIFGESHAALWWVGISLTLCG-LLVLHGSTPQTL 141          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A3M6UCN0_POCDA (Uncharacterized protein n=3 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6UCN0_POCDA)

HSP 1 Score: 62.0 bits (149), Expect = 1.120e-9
Identity = 32/66 (48.48%), Postives = 49/66 (74.24%), Query Frame = 0
Query:   15 FLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLV 79
            FL NA+M ++++K+L  S S+  ATVTN A+NFI + +LG +LFGE LS  W  G SL+++G++L+
Sbjct:   87 FLFNALMWTLFVKSLRASSSSATATVTNTASNFICTALLGCLLFGETLSMQWWLGTSLILTGLILI 152          
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: UPI00026599A2 (uncharacterized protein LOC100905534 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026599A2)

HSP 1 Score: 61.2 bits (147), Expect = 2.450e-9
Identity = 33/92 (35.87%), Postives = 52/92 (56.52%), Query Frame = 0
Query:    6 VQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSK 96
            V+G  L  M   NA+M +++ KAL  S STV  TV N A NF  S + G+  FGE L+ +W  G+ +++ G+ L+  G+     +G + + K
Sbjct:   62 VRGGFLLSMIACNALMWTIFTKALRSSSSTVEVTVVNLAANFFCSAIFGQSFFGERLTLVWALGSVIIIIGLALIHVGSKRNVESGKLSQEK 153          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G768_ECTSI2.200e-2863.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
UPI00142586A97.090e-1240.45transmembrane protein 42-like isoform X2 n=2 Tax=A... [more]
A0A1Y1YT04_9FUNG9.600e-1246.25Uncharacterized protein n=1 Tax=Basidiobolus meris... [more]
UPI000719CFA64.420e-1138.61transmembrane protein 42-like isoform X1 n=1 Tax=P... [more]
V4ADD2_LOTGI6.230e-1140.79Uncharacterized protein n=1 Tax=Lottia gigantea Ta... [more]
A0A087UXV3_STEMI2.350e-1037.65Transmembrane protein 42 (Fragment) n=2 Tax=Stegod... [more]
W4H3N1_9STRA3.830e-1037.65EamA domain-containing protein n=2 Tax=Aphanomyces... [more]
A0A3B5AHU2_9TELE7.890e-1048.68Transmembrane protein 42-like n=5 Tax=Pomacentrida... [more]
A0A3M6UCN0_POCDA1.120e-948.48Uncharacterized protein n=3 Tax=Pocilloporidae Tax... [more]
UPI00026599A22.450e-935.87uncharacterized protein LOC100905534 n=1 Tax=Galen... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039632Transmembrane protein 42PANTHERPTHR31965FAMILY NOT NAMEDcoord: 4..91
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 85..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 63..84
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 58..62
NoneNo IPR availableSUPERFAMILY103481Multidrug resistance efflux transporter EmrEcoord: 10..82
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 33..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig126contigF-serratus_M_contig126:544760..545742 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig126.1960.1mRNA_F-serratus_M_contig126.1960.1Fucus serratus malemRNAF-serratus_M_contig126 544456..551631 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig126.1960.1 ID=prot_F-serratus_M_contig126.1960.1|Name=mRNA_F-serratus_M_contig126.1960.1|organism=Fucus serratus male|type=polypeptide|length=108bp
MVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSG
VLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEEKL
TTNLKQD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039632TMEM42