mRNA_F-serratus_M_contig126.1960.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: D7G768_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G768_ECTSI) HSP 1 Score: 170 bits (430), Expect = 2.180e-49 Identity = 93/157 (59.24%), Postives = 115/157 (73.25%), Query Frame = 1
Query: 7 SALADLGKHRFSVASGILACLASVLGKVAFDGETPLHLLARSSCHHHFAGWGGCNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEEKLTT 477
+A+ + H +SVASG LAC ASVLGKVAFDG+TP + A S+C HF CN V +VQG SLAGMF+VNAVMLS +LKAL++SGSTVATVTN +TNF+LSG+ GRM+FGE L LW GASLVVSGV+L+ G+S + +R K E LT+
Sbjct: 8 AAIIAIENHGYSVASGALACFASVLGKVAFDGDTPFQVQATSACEEHFPELALCNTVGRLVQGASLAGMFMVNAVMLSTFLKALQMSGSTVATVTNFSTNFVLSGISGRMVFGERLPALWFFGASLVVSGVVLLTGGSSPEG-GKTSERIKGEGLTS 163
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: W4H3N1_9STRA (EamA domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3N1_9STRA) HSP 1 Score: 81.3 bits (199), Expect = 1.720e-15 Identity = 46/140 (32.86%), Postives = 74/140 (52.86%), Query Frame = 1
Query: 49 SGILACLASVLGKVAFDGETPLHLLARSSCHHHFAG---WGGCNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSK 459
SG +A ++ +LGK++ D + ++ CH H W C VV A M L NAVMLS +++ L + S AT+T+ A NF+++ ++G ++F E L W GAS+++ G+ L++ G D D K K
Sbjct: 7 SGTIAAVSGMLGKLSSDDNASVIQTIQAYCHEHQHAAYPWLDCAWAMRVVHVAFFAAMLLSNAVMLSFFVRGLHETDSLTATITSSAANFVVTALVGYLVFHEQLPLQWWVGASVILFGMGLLLHGAKDDITTDDSKAKK 146
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: UPI000C6E3DFD (transmembrane protein 42-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6E3DFD) HSP 1 Score: 80.5 bits (197), Expect = 4.050e-15 Identity = 54/151 (35.76%), Postives = 86/151 (56.95%), Query Frame = 1
Query: 40 SVASGILACLASVLGKVAFDGETPLHL-------LARSSCHHHFAGWGGCNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEEK 468
S+ SG+LA LAS+ GK + E L+L ++ H A CN V L+VQ M L NA+M +++ KAL++ +T+ ATVTN A NF + + G++ FGE L+FLW G +++ G++L+ G + + + IK S ++K
Sbjct: 7 SLFSGLLAALASLFGKFSMASEEALYLCEVSMEFMSSDEHVHRKAYHNVCNNVLLLVQIGFFLLMLLSNALMWTLFTKALQLCATTLEATVTNTAANFFFTAIFGQVFFGETLTFLWWLGTMMIIVGLLLMHKG-NQRLHSNVIKVSSKQK 156
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A1V9YZD8_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YZD8_9STRA) HSP 1 Score: 77.4 bits (189), Expect = 3.820e-14 Identity = 46/146 (31.51%), Postives = 81/146 (55.48%), Query Frame = 1
Query: 40 SVASGILACLASVLGKVAFDGETPLHLLARSSCHHHFAGWGGCNMVRLVVQGVSLA---GMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEEK 468
S SG++A ++ +LGK + DG T L S C G+ V+ GV + M L NA+ML+ +++ L + S AT+T+ A NF+++ +LG ++FGEHL W GA++++ G+ ++ G V +++K++K
Sbjct: 4 SAVSGVIAAVSGMLGKFSSDGSTSLMQYIESQCVGEHCGY--------VLAGVRIGFFVAMLLSNALMLNFFVQGLHETDSLTATITSSAANFVVTAILGLLVFGEHLPLQWWLGATVILVGMGCLLHGDKQPVV----EKTKDKK 137
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A1Y1YT04_9FUNG (Uncharacterized protein n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1YT04_9FUNG) HSP 1 Score: 77.4 bits (189), Expect = 5.220e-14 Identity = 52/138 (37.68%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 22 LGKHRFSVASGILACLASVLGKVAFDGETPL--HLLARSSCH------HHFAGWGGCNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLV 408
+ + +VA+G A LAS+ K+ D T + L R C + G N+V L+++G+ L G+FL NA+M +M+ KAL S S+V TV N TNF + G ++FGE LS W CGASL+ G +L+
Sbjct: 3 VSSNLLAVAAGSFAALASLFAKLTVDARTIVLAESLYRLGCQTFGLEVSEYLGQED-NLVYLIIRGLCLGGIFLCNALMWTMFTKALNSSKSSVQVTVLNSVTNFCTTAFCGHVVFGEPLSLKWWCGASLIAVGSILM 139
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A433QZ90_9FUNG (Uncharacterized protein n=1 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433QZ90_9FUNG) HSP 1 Score: 77.0 bits (188), Expect = 7.790e-14 Identity = 54/149 (36.24%), Postives = 84/149 (56.38%), Query Frame = 1
Query: 37 FSVASGILACLASVLGKVAFDGETPLHLLARSSCHHHFAGWGGC-----NMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEE 465
F++ SG+ A LASV K+ D T + S +AG C N++ LVV+G A +F NA+M +++ KAL + S+V TV N A NF + +LG ++FGE L+ W GASL+V+G +L+ S+ A + +++K E
Sbjct: 10 FALLSGLFASLASVFAKLFTDTRTDAAIQWICSASQLYAGLDLCANQGDNVLLLVVRGTCFALIFGCNALMWTLFTKALNKATSSVQVTVVNSAINFCATAILGNVVFGEPLALQWWGGASLIVTGTLLMTRAQSN---ASEQEKTKTE 155
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: UPI000719CFA6 (transmembrane protein 42-like isoform X1 n=1 Tax=Priapulus caudatus TaxID=37621 RepID=UPI000719CFA6) HSP 1 Score: 76.3 bits (186), Expect = 1.140e-13 Identity = 53/148 (35.81%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 37 FSVASGILACLASVLGKVAFDGETPLHLLARSSCHHHFAGWG-GCNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKEEKLT 474
++V SG+LA +AS GK+A AR C C+ + L V+G +FL+NAVM +++ KAL +S +T+ AT+TN A+N + + GR+LFGE L W GA L+V+GV L+ A D +R + K +
Sbjct: 7 YAVVSGMLAAMASASGKMAAASSD-----ARWLCGAVVTPAALDCDSILLYVRGSCFLLVFLLNAVMWTVFTKALRLSPTTLSATITNLASNLFFTALTGRLLFGETLGATWFVGAGLIVTGVALI------HNAAADAEREAQRKTS 143
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: UPI00026599A2 (uncharacterized protein LOC100905534 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI00026599A2) HSP 1 Score: 77.0 bits (188), Expect = 1.220e-13 Identity = 49/151 (32.45%), Postives = 76/151 (50.33%), Query Frame = 1
Query: 37 FSVASGILACLASVLGKVAFDGETPLHLLARSSCHHHFAGWGG---------CNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSK 459
FS+ SG LA L+SVLGK+ + A + C + W C + +V+G L M NA+M +++ KAL S STV TV N A NF S + G+ FGE L+ +W G+ +++ G+ L+ G+ +G + + K
Sbjct: 8 FSLLSGFLASLSSVLGKLGMASDR-----AAAMCQTVLSAWFETTQIEAFYLCESILSLVRGGFLLSMIACNALMWTIFTKALRSSSSTVEVTVVNLAANFFCSAIFGQSFFGERLTLVWALGSVIIIIGLALIHVGSKRNVESGKLSQEK 153
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: UPI00142586A9 (transmembrane protein 42-like isoform X2 n=2 Tax=Anneissia japonica TaxID=1529436 RepID=UPI00142586A9) HSP 1 Score: 74.7 bits (182), Expect = 8.010e-13 Identity = 47/152 (30.92%), Postives = 85/152 (55.92%), Query Frame = 1
Query: 40 SVASGILACLASVLGKVAFDGETPLHLLARSSCHHH-----FAGW-------------GGCNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVA 438
S+ +G+ A L SV K+A + + + + + F W C + + +Q +S AG+F+ NA M ++++K+L++S ++V ATVTN A+NF S ++G ++FGE LS W G+ ++VSG++L+ ++ KTV+
Sbjct: 7 SIGAGLCAALGSVCAKLALNSDILIQMCTTGATAVFAALPAFGSWLRLQDGSLGLRSKTTCETISIYLQVMSFAGIFIFNAFMWTLFVKSLQLSKASVQATVTNSASNFFFSALIGHLVFGEALSIRWWIGSMMIVSGLILMQRASA-KTVS 157
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Match: A0A087UXV3_STEMI (Transmembrane protein 42 (Fragment) n=2 Tax=Stegodyphus TaxID=175340 RepID=A0A087UXV3_STEMI) HSP 1 Score: 72.0 bits (175), Expect = 5.980e-12 Identity = 49/152 (32.24%), Postives = 76/152 (50.00%), Query Frame = 1
Query: 37 FSVASGILACLASVLGKVAFDGETPLHLL---------ARSSCHHHFAGWGGCNMVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTV-ATVTNCATNFILSGVLGRMLFGEHLSFLWLCGASLVVSGVMLVVAGTSDKTVAGDIKRSKE 462
FS+ SG LA AS+ GK + E L A + + F C V V + M L NA+M +++ KAL I +T+ ATVTN A NF + + G++ FGE LSFLW G L+++G++++ + + + R K+
Sbjct: 6 FSLISGFLAATASLCGKFSMAAEETLVFCESLMQKLPGADAKKTNVFTYTPVCENVLFVTRVGFFLAMLLSNALMWTLFTKALRICSTTLEATVTNTAANFFFAAIYGQVFFGESLSFLWWMGTMLIITGLIIMHRSNQETVASPPVIRKKK 157 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig126.1960.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig126.1960.1 >prot_F-serratus_M_contig126.1960.1 ID=prot_F-serratus_M_contig126.1960.1|Name=mRNA_F-serratus_M_contig126.1960.1|organism=Fucus serratus male|type=polypeptide|length=108bp MVRLVVQGVSLAGMFLVNAVMLSMYLKALEISGSTVATVTNCATNFILSGback to top mRNA from alignment at F-serratus_M_contig126:544456..551631- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig126.1960.1 ID=mRNA_F-serratus_M_contig126.1960.1|Name=mRNA_F-serratus_M_contig126.1960.1|organism=Fucus serratus male|type=mRNA|length=7176bp|location=Sequence derived from alignment at F-serratus_M_contig126:544456..551631- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig126:544456..551631- >mRNA_F-serratus_M_contig126.1960.1 ID=mRNA_F-serratus_M_contig126.1960.1|Name=mRNA_F-serratus_M_contig126.1960.1|organism=Fucus serratus male|type=CDS|length=648bp|location=Sequence derived from alignment at F-serratus_M_contig126:544456..551631- (Fucus serratus male)back to top |