prot_F-serratus_M_contig819.19606.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig819.19606.1
Unique Nameprot_F-serratus_M_contig819.19606.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length525
Homology
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6A3Q908_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=8 Tax=Phytophthora TaxID=4783 RepID=A0A6A3Q908_9STRA)

HSP 1 Score: 317 bits (813), Expect = 5.540e-98
Identity = 197/526 (37.45%), Postives = 301/526 (57.22%), Query Frame = 0
Query:    1 MQATLDVPEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPEEFQEF---------PGAVGRLNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRR----CMVVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVK 511
            M AT +VP  +   +A   H+ DEW+K   +E+  ++ N  +  + +P  +  IG + ++  K  + G+V +YK RLVA+G+ Q  G+ Y E YSP      +R +LA   A+  E+   D + AFL  +++EEIYME+PE  +E             V  L +++YGL QA R WN      + + GFE A ADP +  R      C +V ++VDD+L  ++ KA +    A + +KF++KD+G A + +G  I  + + R L   Q  Y ES++K+F  +  K    P   GV  L+KADEPQ  E+K +MK  PYR  +G+LM+ A  TRPDI+  V  ++RF ENPG  H  A +K+ +YLL TK+ GI Y GL  G   EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++E EY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID  ++H +R+   +    + YV +++Q A  +TK L  K
Sbjct:   59 MAATEEVP--KTYAEATTRHDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRNEKGQVVRYKARLVAKGYSQRHGIDYEEAYSPVAYLNSVRAMLAKCGAEGMEIEQCDVDTAFLYGELEEEIYMELPEGLRELLDLAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSTGFEPADADPCVYTRGEGEGEC-IVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDLGRARFIVGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQPEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHID-IRYHFIREKVVSSEVELEYVDTKNQLAYFMTKGLSSK 577          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6A3YGI7_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=11 Tax=Phytophthora TaxID=4783 RepID=A0A6A3YGI7_9STRA)

HSP 1 Score: 322 bits (826), Expect = 1.180e-96
Identity = 198/526 (37.64%), Postives = 306/526 (58.17%), Query Frame = 0
Query:    1 MQATLDVPEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPEEFQEF---------PGAVGRLNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRR----CMVVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVK 511
            M AT +VP  +   +A    + DEW+K   +E+  ++ N  +  + +P  +  IG + ++  K  + G+V +YK RLVA+G+ Q  G+ Y E YSP      IR +L   +A+  E+   D + AFL   ++ EIYME+PEE +E             V  L +++YGL QA R WN     ++ ++GFE A ADP +  R      C +V ++VDD+L  ++  A +    A + +KF++KDMG A + +G  I  + + R L   Q  Y ES++K+F  +  K    P   GV  L+KADEPQ  E+K +MK+ PYR  +G+LM+ A  TRPDI+  V  ++RF ENPG  H  A +K+ +YLL TK+ GI Y GL  G  +EAY+D+D+    D RRSVSG +LML +  + W S  Q+  A  ++E EY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID  ++H VR+ + +   ++ YV +++Q AD +TK L  K
Sbjct:  390 MAATEEVP--KTYAEATTRQDQDEWKKAIASELESLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLEKCSAEGMEIEQCDVDTAFLYEKLEAEIYMELPEELRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKNLKSMGFEPADADPCVYTRGEGEDEC-IVCLYVDDMLIASRQMAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKLKPYRSLVGSLMYLARGTRPDISVAVAKLSRFPENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGAQLEAYSDADWAGNRDDRRSVSGMLLMLCRAPVVWRSTFQKTVALSSTEAEYLALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHID-IRYHFVREKAVSNEVKLEYVDTKNQLADFMTKGLSSK 908          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6A3DSS8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=13 Tax=Phytophthora TaxID=4783 RepID=A0A6A3DSS8_9STRA)

HSP 1 Score: 315 bits (806), Expect = 3.220e-96
Identity = 198/526 (37.64%), Postives = 303/526 (57.60%), Query Frame = 0
Query:    1 MQATLDVPEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPE---EFQEFPGAVGR------LNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRR----CMVVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVK 511
            M AT +VP  +   +A    + DEW+K   +E+  ++ N  +  + +P  +  IG + ++  K  + G+V +YK RLVA+G+ Q  G+ Y E YSP      IR +LA  +A+  E+   D + AFL   ++EEIYME+ E   E  E   A G       L +++YGL QA R WN      + ++GFE A  DP +  R      C +V ++VDD+L  ++ KA +    A + +KF++KDMG A + +G  I  + + R L   Q  Y ES++K+F  +  K    P   GV  L+KADEPQ  E+K +MK  PYR  +G+LM+ +  TRPDI+  V  ++RF ENPG  H  A +K+ +YLL TK+ GI Y GL  G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++E EY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N      TKHID  ++H +RD + +   ++ YV +++Q AD +TK L  K
Sbjct:  124 MTATEEVP--KTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGIDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRGEGEDEC-IVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNWDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLIKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHID-IRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGLSSK 642          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6H5KPV1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV1_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 1.010e-95
Identity = 196/527 (37.19%), Postives = 296/527 (56.17%), Query Frame = 0
Query:    8 PEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMAR-PKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGAVGRLNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRRCMV-------VVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITY---GGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVKKFCKHARFILNV 523
            PEP + Q+A +S   + W      E  G+V    ++   + P    VI  + ++K K  + GK+ K K RLVA+GF Q  G+ Y   +SPT +AA IR+L+A A   + EL H D EQAF++  +D  ++M++P       G V RLNK++YGL QA R +  +   D+  IGFEQ+ +DP +    R M+       V +HVDDIL YA +K+  +   A LG     K++G+ ++++G    R+R+   ++  Q  Y+ S+++RF+V + + IPA+  V+  S         E EE    P+RE +G  MW A+ TRPDI+  V AVAR    P  +H KA  KI  YLL T    + +     +  G  +  Y D+DF +    RRSVSGA++ +A   + W SR Q+  A  TSE EY+A+ + VK+ LF   + +F+ PS +   + V EDNEGAI LA N  +S R KHID  +HH +R  ++  R ++++V S++QHAD+LTK L  + F  H  F+L +
Sbjct:  165 PEPDSYQEARQSKHAEVWDVAMSAEFEGLVRAGTFSLAVKVPIGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGIDYLLTFSPTANAASIRLLVALACKYNLELLHLDIEQAFVQTKLDHAVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDPCVL---RFMMGDEVMGMVAIHVDDIL-YAGSKSLAETVVAALGDSLPTKNLGEVKFFLGCAFRRDREAGTIEISQESYIRSVLERFNVVRTSSIPASPTVVNRSVM-------ENEEAGDVPFREVVGCAMWIASQTRPDISNVVRAVARHSHEPKLSHWKAAQKILNYLLGTAHLSLNFKRDSSVDVGTLV--YVDADFASKATDRRSVSGALVFVAGMLVVWTSRTQKCVAQSTSEAEYLAMGDGVKEALFEDGMLQFLRPSEKSREIKVLEDNEGAIALADNPLSSGRRKHID-VRHHFLRSLTEEGRIKISHVSSKEQHADILTKALPRELFEVHRNFVLGL 677          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A0A9Z683_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=3 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9Z683_LYGHE)

HSP 1 Score: 325 bits (832), Expect = 4.330e-95
Identity = 187/500 (37.40%), Postives = 300/500 (60.00%), Query Frame = 0
Query:   23 DEWRKVEETEMLGMVENCVYNQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGAVGRLNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSL---TLRRRCMVVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGV---LTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQV-QEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVKKFCK 515
            D W++  + E    +EN  +  +  P  K+ + +K +++ K    GK+ K+K RLV +G  Q +G+ + E +SP    + IR LLA A  +D ++   DA  AFL+ D+ EEIYM  PE +QE  G V RL K++YGL QA R WN K    +  IG  Q+K DP +   + +++ + V V VDD+L ++  K       ++L + FK+ D+G+A++ +G+ I+R+R+ +++  DQ  Y+++++ RF +  E   PAA+ +   + LSK  +P +P+E+++M+  PY+EA+G+L++ + + RPDIA  V  V+RF  NPGPAH  AV +I +Y+  T +W + Y G      +  Y DSDF + +D R+SV+G V ++  GS+SW ++ Q  TA  T+E EY+ALS   ++ L+LR + +E + PS R+  + +F DN+GA+ LA N     RTKHID  +HH +R+    +  +  YV + D  AD LTK L   KF K
Sbjct:  853 DLWKQAMDVEYKSQLENGTWELVDLPPGKVPLNSKWVFRTKRDVTGKIVKHKARLVVKGCAQRKGLDFEETFSPVVRYSSIRYLLALAAKRDMDIHQMDAVSAFLQGDLTEEIYMRQPEGYQE-SGKVCRLRKSLYGLKQASRVWNIKLDRSLKTIGLRQSKFDPCIYYKSSQKKMVFVAVWVDDLLIFSDDKKLTQEVKSQLMKCFKMTDIGEAKFVLGFQISRDRERKKIWMDQRAYIDNVLIRFGM--ENCNPAATPLDPNIKLSKDQQPSSPDERKKMEAIPYQEAVGSLLFASQVCRPDIAFAVSLVSRFNSNPGPAHWAAVKRILRYMKGTSDWKLEYDGTKSSE-ITGYCDSDFASDVDERKSVTGYVFLMCDGSVSWGTKKQPTTALSTTEAEYMALSAATQEALWLRGLSEELVPPSERI-PLRIFVDNQGALNLAQNGSYQSRTKHID-VRHHFLREKISEKLIKPTYVPTSDMVADSLTKSLCPVKFIK 1346          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6G0QQ26_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=20 Tax=Phytophthora TaxID=4783 RepID=A0A6G0QQ26_9STRA)

HSP 1 Score: 314 bits (804), Expect = 1.220e-93
Identity = 198/526 (37.64%), Postives = 303/526 (57.60%), Query Frame = 0
Query:    1 MQATLDVPEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPE---EFQEFPGAVGR------LNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRR----CMVVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVK 511
            M AT +VP  +   +A    + DEW+K   +E+  ++ N  +  + +P  +  IG + ++  K  + G+V +YK RLVA+G+ Q  G++Y E YSP      IR +LA  +A+  E+   D + AFL   ++EEIYME+ E   E  E   A G       L +++YGL QA R WN      + ++GFE A  DP +  R      C +V ++VDD+L  ++ KA +    A + +KF++KDMG A + +G  I  N + R L   Q  Y ES++K+   +  K    P   GV  L+KADEPQ  E+K +MK  PYR  +G+LM+ +  TRPDI+  V  ++RF ENPG  H  A +K+ +YLL TK+ GI Y GL  G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++E EY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N      TKHID  ++H +RD + +   ++ YV +++Q AD +TK L  K
Sbjct:  368 MAATEEVP--KTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKDRLVAKGYSQRHGINYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELLEGLRELLELAEAEGEDDVVCMLLQSLYGLKQASRVWNETIDKHLKSMGFEPADDDPCVYTRGEGEDEC-IVCLYVDDMLIASRQKAVIASVKAGIAEKFRIKDMGRARFILGIEIDYNMERRTLGISQKAYTESIIKKVGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLSCGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVGIVYDGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSSFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATVIYEDNQGAMALAKNVGYQAGTKHID-IRYHFIRDKAVSNEVKLEYVDTKNQLADFMTKGLSSK 886          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6A3Q8N8_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=6 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3Q8N8_9STRA)

HSP 1 Score: 303 bits (776), Expect = 3.930e-92
Identity = 193/526 (36.69%), Postives = 295/526 (56.08%), Query Frame = 0
Query:    1 MQATLDVPEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPE---EFQEFPGAVGR------LNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRR----CMVVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVK 511
            M AT +VP  +   +A    + DEW K   +E+  +V N  +  + +P  +  IG + ++  K  +  +  +YK RLVA+G+ Q   + Y E YSP      IR +L   +A+  E+   D + AFL   ++EEIYME+PE   E  E   A G       L +++YGL  A R WN+     + ++GFE A ADP +  R      C +V ++VD++L  ++ KA +    A + +KF++KD+G A + +G  I  N + R L   Q  Y ES++K F  +  K    P   GV  L+KADEPQ  E+K +MK  PYR  +G+LM+ A  TRPD++  V  ++RF ENPG  H  + +K  +YLL TK+ GI Y G   G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++E EY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID  ++H +R+        + YV +++Q AD +TK L  K
Sbjct:   92 MAATEEVP--KTYAEATTRQDQDEWMKAIASELESLVANKTWKLVPKPVHQRPIGCRWVFALKRDEKRQAVRYKARLVAKGYSQRHDIDYEETYSPVAYLNSIRAMLVKCSAEGMEIERCDFDTAFLYGKLEEEIYMELPEGLRELLELAEAQGEDDVVCMLLQSLYGLKHASRVWNDTIDKHLKSMGFEPADADPCVYTRGEGEDEC-IVCLYVDNMLIASRQKAVITSVKAGIAEKFRIKDLGRARFILGIEIDYNMERRTLGISQKAYTESIIKTFGQENAKPCLTPLEPGV-QLTKADEPQTEEDKAKMKSKPYRSVVGSLMYLACGTRPDVSVAVAKLSRFLENPGEKHWDSGIKAVRYLLKTKDVGIVYDGQ-LGTHLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSTFQKTVALSSTEAEYMALSDCVKECVWMRRLLKDIGAE-QVGATEIYEDNQGAMALAKNVGYQARTKHID-IRYHFIREKVVGNEVELEYVDTKNQLADFMTKGLSSK 610          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6A3JDE6_9STRA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3JDE6_9STRA)

HSP 1 Score: 310 bits (793), Expect = 5.060e-92
Identity = 196/526 (37.26%), Postives = 299/526 (56.84%), Query Frame = 0
Query:    1 MQATLDVPEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMARPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPE---EFQEFPGAVGR------LNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRR----CMVVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVK--KEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVK 511
            M AT +VP  +   +A    + DEW+K   +E+  ++ N  +  + +P  +  IG + ++  K  + G+V +YK RLVA+G+ Q  G  Y E YSP      IR +LA  +A+  E+   D + AFL   ++EEIYME+PE   E  E   A G       L +++YGL QA R WN      + ++GFE A A+P +  R      C +V ++VDD+L  ++ KA +    A + + F++KD+G A + +G  I  + + R L   Q  Y ES++K+F  +  K    P    V  L+KADEPQ  E+K +MK  PYR  +G+LM+ A  TRPDI+  V  ++RF ENPG  H  A +K+ +YLL TK+  I Y GL  G  +EAY+D+D+    D RRSVSG +LML    + W S  Q+  A  ++E EY+ALS+ VK+ +++R++ + +    +VGA  ++EDN+GA+ LA N     RTKHID  ++H +R    +    + YV +++Q AD +TK L  K
Sbjct:  371 MAATEEVP--KTYAEATTRQDQDEWKKAIASELKSLIVNKTWKLVPKPAHQRPIGCRWVFALKRDEKGQVVRYKARLVAKGYSQRHGTDYEETYSPVAYLNSIRAMLAKCSAEGMEIEQCDVDTAFLYGKLEEEIYMELPEGLRELLELAEAEGEDDVDCMLLQSLYGLKQASRVWNETIDKHLNSMGFEPADANPCVYTRGEGDDEC-IVCLYVDDMLIASRQKAVIASVKAGIAENFRIKDLGRARFILGIEIDYDMERRTLGISQKAYTESIIKKFGQENAKPCLTPLEPSV-QLTKADEPQTEEDKAKMKSKPYRSLVGSLMYLACGTRPDISVAVAKLSRFLENPGEKHWDAGIKVVRYLLKTKDVSIVYEGL-LGTQLEAYSDADWAGNRDDRRSVSGMLLMLCGAPVVWRSMFQKTVALSSTEAEYMALSDCVKECVWIRRLLKEIGAE-QVGATVIYEDNQGAMALAKNVGYQARTKHID-IRYHFIRKKVVSNEVELEYVDTKNQLADFMTKGLSSK 889          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6H5KN43_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN43_9PHAE)

HSP 1 Score: 303 bits (776), Expect = 9.060e-92
Identity = 179/469 (38.17%), Postives = 274/469 (58.42%), Query Frame = 0
Query:   63 KIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGAVGRLNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLT---LRRRCM-VVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYGG---LGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPLDVKKFCKHARFILNVV 524
            ++   GK+ K K RLVA+GF Q  GV Y E +SPT +AA IR+L+A A   D E  HFD EQAF+++++D E++M++P   +   G V RL+K++YGL QA R ++ +   D+  IGFEQ+ +DP +    +    + ++ +HVDDIL YA  +   +     LG     K++G+  +++G    R+R+   ++  Q  Y+ S+++RF+V + + IPA       S  ++ ++  E E     P+R+ +G+LMW A  TRPDI+  V AVAR    P  +H KA  KI  YLL T    + Y     +  G  +  Y D+DF +    RRS SGA++++A   ++W SR Q+     T+E EYVA+ + VK+ LF++ + EF+ PS R+G + V EDNEGAI LA N  +S  +KHID  +HHL R+ ++     + +V SE QHAD+LTK L    F  H  F L ++
Sbjct:  203 RVSSKGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLLVALACKYDLEFLHFDIEQAFVQSELDHEVFMKLPPGCESMTGKVVRLDKSLYGLRQASRTFHKRLVSDLKRIGFEQSLSDPCVLHFMMGDEVLGMIAIHVDDIL-YAGIERLAEMVVEALGDSLPTKNLGEVRFFLGCAFARDREAGTIEMSQESYIRSVLERFNVCRTSSIPA-------SLTNDYRSVIEDEGAGDVPFRDVVGSLMWIANQTRPDISNAVRAVARHSHEPNKSHWKAAQKILNYLLETAHLTLKYKQDTMVDVGTLV--YVDADFASEATDRRSDSGALVLVADCLVAWISRTQKCVTLSTTEAEYVAMGDGVKEALFVKGMLEFLRPSDRIGKIQVREDNEGAIALAENPLSSCNSKHID-VRHHLFRNLTEEGVLEIRHVSSEGQHADILTKALPRGCFEVHRNFALGLI 660          
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Match: A0A6H5JV80_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV80_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 1.060e-91
Identity = 185/507 (36.49%), Postives = 287/507 (56.61%), Query Frame = 0
Query:    8 PEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMAR-PKDKLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSAAPIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGAVGRLNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLT---LRRRCM-VVVVHVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRELKFDQHLYVESMVKRFDVKKEAKIPAASGVLTLSKADEPQNPEEKEEMKIFPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYLLHTKEWGITYG-GLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSISWHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVFEDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQHADLLTKPL 508
            PEP + Q+A+ S     W K    E+ G++    +   A+ P+   VI  + ++K K  + GK+ K K RLVA+GF Q  GV Y E +SPT +AA IR+++A A   + EL H D EQAF ++ +D E+ M++P       G + RLNK++YGL QA R +  +   D+  IGFEQ+ +DP +    +    M ++ +HVDDIL YA  K   +     LG     K++G+  +++G   +R+R+   ++  Q  Y+ S+++RF++ + + IPA       S A++ ++  E EE    P+RE +G LMW A  TRP+ +  V  VAR    P  +  KA  KI  YL  T    + Y       +    Y D+DF +    RRSVSGA++++A   +SW S  Q+  +  TSE EY+A+ + VK+ LF+  + + + PS +   ++VFEDNEGAI LA N  +S R+KHID  +HH +R+ ++     V +V S++QHAD+LTK L
Sbjct:  211 PEPGSYQEALRSKHATIWDKAMSAEVEGLIRAGTFTLAAKIPEGCNVIDARWVFKWKADETGKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFFQSKLDHEVLMKLPPGCDSMSGKIVRLNKSLYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL-YAGTKRLAEVIVEALGDSLPTKNLGEVRFFLGCAFSRDREAGTIEISQESYIRSVLERFNICRTSSIPA-------SPANDSRSVMEDEEAGDVPFREVVGCLMWIANNTRPETSNAVRTVARHSHEPKKSDWKAAQKILSYLKETAHLTLKYKQDTTVDVGTLVYVDADFASKATDRRSVSGALVLVAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQLLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHID-VRHHFLRNLTEEGVIEVTHVPSKEQHADILTKAL 708          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig819.19606.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3Q908_9STRA5.540e-9837.45Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3YGI7_9STRA1.180e-9637.64Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3DSS8_9STRA3.220e-9637.64Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KPV1_9PHAE1.010e-9537.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A0A9Z683_LYGHE4.330e-9537.40Retrovirus-related Pol polyprotein from transposon... [more]
A0A6G0QQ26_9STRA1.220e-9337.64Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3Q8N8_9STRA3.930e-9236.69Retrovirus-related Pol polyprotein from transposon... [more]
A0A6A3JDE6_9STRA5.060e-9237.26Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KN43_9PHAE9.060e-9238.17Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JV80_9PHAE1.060e-9136.49Reverse transcriptase Ty1/copia-type domain-contai... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 41..270
e-value: 1.8E-48
score: 165.3
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 3..509
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 53..472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig819contigF-serratus_M_contig819:320771..322361 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig819.19606.1mRNA_F-serratus_M_contig819.19606.1Fucus serratus malemRNAF-serratus_M_contig819 320771..322361 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig819.19606.1 ID=prot_F-serratus_M_contig819.19606.1|Name=mRNA_F-serratus_M_contig819.19606.1|organism=Fucus serratus male|type=polypeptide|length=525bp
MQATLDVPEPRNRQQAMESHEWDEWRKVEETEMLGMVENCVYNQMARPKD
KLVIGTKMLYKRKIGQDGKVEKYKCRLVAQGFWQVEGVHYTEKYSPTPSA
APIRMLLATATAKDGELRHFDAEQAFLKADIDEEIYMEIPEEFQEFPGAV
GRLNKAIYGLGQAGRCWNNKFCDDMTAIGFEQAKADPSLTLRRRCMVVVV
HVDDILAYAKAKATMDRFAAELGQKFKLKDMGDAEYYMGYHITRNRKTRE
LKFDQHLYVESMVKRFDVKKEAKIPAASGVLTLSKADEPQNPEEKEEMKI
FPYREAMGALMWTATITRPDIACPVHAVARFCENPGPAHKKAVMKIFQYL
LHTKEWGITYGGLGCGLCMEAYTDSDFGACLDTRRSVSGAVLMLAKGSIS
WHSRMQEVTAAGTSEEEYVALSEVVKDVLFLRQVQEFMEPSMRVGAVNVF
EDNEGAIKLATNKHASRRTKHIDEAKHHLVRDASDAQRARVAYVRSEDQH
ADLLTKPLDVKKFCKHARFILNVV*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2