prot_F-serratus_M_contig819.19605.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig819.19605.1
Unique Nameprot_F-serratus_M_contig819.19605.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length362
Homology
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: A0A6H5JWJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWJ8_9PHAE)

HSP 1 Score: 135 bits (341), Expect = 2.500e-31
Identity = 99/236 (41.95%), Postives = 119/236 (50.42%), Query Frame = 0
Query:   79 SADGRVQLKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASTPSPSLSSSSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRPGIGGPRGKGNGGGEARVVVFQPTLVRAWEGRDDLPLRVLQVACGRFHSLAIARSRRENFLQQGVSAPPSTSPTG-----------------AGTGTNLLLSWGRAGCGRLGRNP 297
            +A G   LKAP RV +L  + V+QVSCGA+HTL +T++G LFAWGDNRYGQCGLP W          PSLSS   S  G  +   GL    G +  ++S  K        F GG      + G G   GKG+G     + VF+PT V  W+  DDLPLRVLQVA GR HSLAIA SR  +      S+                              N+L SWG AG GRLGR P
Sbjct:  521 AAGGSFWLKAPVRVAALSADTVVQVSCGAKHTLVITSEGHLFAWGDNRYGQCGLP-W----------PSLSSPGDSPRGDGDGQFGLKT-FGQMAKKMSTKK--------FFGGAD----KAGDGSDGGKGSGDSGGGMTVFRPTRVLLWQEGDDLPLRVLQVASGRQHSLAIACSRSTDKACVPDSSXXXXXXXXXXXXXXXXXXXXXXVVHVNRRENVLYSWGAAGSGRLGRLP 732          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: D7FTN1_ECTSI (Similar to hect domain and RLD 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTN1_ECTSI)

HSP 1 Score: 135 bits (340), Expect = 3.590e-31
Identity = 101/242 (41.74%), Postives = 119/242 (49.17%), Query Frame = 0
Query:   86 LKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASTPSPSLSSSSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRPGIGGPRGKGNGGGEARVVVFQPTLVRAWEGRDDLPLRVLQVACGRFHSLAIARSRREN----------------FLQQGVSAPPSTSPTGAGTGTNLLLSWGRAGCGRLGRNPSL-PSQSSNGQSPS 310
            LKAP RV +L  + V+QVSCGA+HTL +T++G LFAWGDNRYGQCGLP W           SLSS + S  G  +   GL    G +  ++S  K             PGG  + G G   GKGNG     + VF+PTLV   +  DDLPLRVLQVA GR HSLAIA SR  +                                     N+L SWG  G GRLGR P   PS S    SPS
Sbjct:  851 LKAPVRVAALSADHVVQVSCGAKHTLVITSEGHLFAWGDNRYGQCGLP-WH----------SLSSPADSPRGDGDGQFGLKT-FGQMAKKMSTKK------------FPGGADKAGDGSDGGKGNGDSGGGMTVFRPTLVLLRQEGDDLPLRVLQVASGRQHSLAIACSRSNDKACVPDNSAXXXXXXXXXXXXXXXXXXXXSARVNHRANVLYSWGATGSGRLGRLPRRNPSSSPFASSPS 1068          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: H3ASL0_LATCH (HECT domain-containing protein n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3ASL0_LATCH)

HSP 1 Score: 62.0 bits (149), Expect = 9.610e-7
Identity = 25/49 (51.02%), Postives = 36/49 (73.47%), Query Frame = 0
Query:   86 LKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPR 134
            +K P  +  L  ++V+QV+CG+RH +A+T DGQLF WG+N YGQ GL +
Sbjct:  124 IKVPRLIKKLNEHKVVQVTCGSRHCIALTKDGQLFTWGENTYGQLGLDK 172          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: A0A1V9YFA0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFA0_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 2.720e-6
Identity = 25/47 (53.19%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   86 LKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGL 132
            +K P+ V +LV+ +V QV+CGA HTL     GQ++AWGDN YGQ G+
Sbjct:  204 VKVPTIVAALVKQQVFQVACGANHTLCTVVGGQVYAWGDNTYGQLGV 250          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: A0A6P7X8U9_9AMPH (probable E3 ubiquitin-protein ligase HERC3 isoform X3 n=1 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7X8U9_9AMPH)

HSP 1 Score: 60.5 bits (145), Expect = 2.750e-6
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:   89 PSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGL 132
            P  +  L R RV+QVSCG+ HTLA+  DGQLF+WG N++GQ GL
Sbjct:  128 PRLIKKLNRQRVLQVSCGSWHTLALAEDGQLFSWGQNKHGQLGL 171          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: A0A6P8SAN2_GEOSA (E3 ISG15--protein ligase HERC5-like isoform X1 n=2 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8SAN2_GEOSA)

HSP 1 Score: 60.5 bits (145), Expect = 2.950e-6
Identity = 27/47 (57.45%), Postives = 34/47 (72.34%), Query Frame = 0
Query:   89 PSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRW 135
            PS   SL    ++QVSCG RH+LA++ DGQLFAWG+N +GQ GL  W
Sbjct:  123 PSLQNSLYDKCIIQVSCGERHSLALSKDGQLFAWGENTHGQLGLGDW 169          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: UPI00188F842C (probable E3 ubiquitin-protein ligase HERC6 n=1 Tax=Talpa occidentalis TaxID=50954 RepID=UPI00188F842C)

HSP 1 Score: 60.1 bits (144), Expect = 3.930e-6
Identity = 24/44 (54.55%), Postives = 35/44 (79.55%), Query Frame = 0
Query:   89 PSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGL 132
            P ++MSL   +++QVSCG  H+LA++ DGQ+F+WG+N YGQ GL
Sbjct:  115 PEKIMSLTDIKIIQVSCGHYHSLALSEDGQVFSWGNNHYGQLGL 158          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: A0A7N4PG86_SARHA (Uncharacterized protein n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=A0A7N4PG86_SARHA)

HSP 1 Score: 58.5 bits (140), Expect = 5.410e-6
Identity = 23/48 (47.92%), Postives = 36/48 (75.00%), Query Frame = 0
Query:   85 QLKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGL 132
            Q   P  + +L R++++QVSCG  H++A+T DG++F+WGDN +GQ GL
Sbjct:  129 QCSIPKNIAALSRDKIIQVSCGHYHSIALTQDGKVFSWGDNDHGQLGL 176          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: UPI0014811BC5 (probable E3 ubiquitin-protein ligase HERC4 isoform X4 n=1 Tax=Pangasianodon hypophthalmus TaxID=310915 RepID=UPI0014811BC5)

HSP 1 Score: 59.3 bits (142), Expect = 5.830e-6
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   86 LKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWG 136
            ++ P  + SL    V+QVSCG RH+LA++  GQ+F+WG NRYGQ GL + G
Sbjct:  125 MRVPRTIKSLSEIHVVQVSCGYRHSLALSRRGQIFSWGQNRYGQLGLGKEG 175          
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Match: A0A8J4TIY9_CLAMG (Putative E3 ubiquitin-protein ligase HERC4 isoform X1 (Fragment) n=1 Tax=Clarias magur TaxID=1594786 RepID=A0A8J4TIY9_CLAMG)

HSP 1 Score: 59.3 bits (142), Expect = 5.990e-6
Identity = 26/51 (50.98%), Postives = 36/51 (70.59%), Query Frame = 0
Query:   86 LKAPSRVMSLVRNRVMQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWG 136
            ++ P  V SL    ++QVSCG RH+LA++  GQ+F+WG NRYGQ GL + G
Sbjct:  137 MRVPRTVKSLSEVHIVQVSCGYRHSLALSRRGQIFSWGQNRYGQLGLGKEG 187          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig819.19605.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JWJ8_9PHAE2.500e-3141.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTN1_ECTSI3.590e-3141.74Similar to hect domain and RLD 4 n=1 Tax=Ectocarpu... [more]
H3ASL0_LATCH9.610e-751.02HECT domain-containing protein n=2 Tax=Latimeria c... [more]
A0A1V9YFA0_9STRA2.720e-653.19Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A6P7X8U9_9AMPH2.750e-659.09probable E3 ubiquitin-protein ligase HERC3 isoform... [more]
A0A6P8SAN2_GEOSA2.950e-657.45E3 ISG15--protein ligase HERC5-like isoform X1 n=2... [more]
UPI00188F842C3.930e-654.55probable E3 ubiquitin-protein ligase HERC6 n=1 Tax... [more]
A0A7N4PG86_SARHA5.410e-647.92Uncharacterized protein n=1 Tax=Sarcophilus harris... [more]
UPI0014811BC55.830e-650.98probable E3 ubiquitin-protein ligase HERC4 isoform... [more]
A0A8J4TIY9_CLAMG5.990e-650.98Putative E3 ubiquitin-protein ligase HERC4 isoform... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IIGENE3D2.130.10.30coord: 34..177
e-value: 1.7E-15
score: 58.8
IPR009091Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein IISUPERFAMILY50985RCC1/BLIP-IIcoord: 85..302
NoneNo IPR availablePFAMPF13540RCC1_2coord: 102..129
e-value: 4.8E-11
score: 42.2
NoneNo IPR availablePANTHERPTHR22870REGULATOR OF CHROMOSOME CONDENSATIONcoord: 82..310
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 103..113
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS00626RCC1_2coord: 241..251
IPR000408Regulator of chromosome condensation, RCC1PROSITEPS50012RCC1_3coord: 61..116
score: 10.544

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig819contigF-serratus_M_contig819:189939..195193 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig819.19605.1mRNA_F-serratus_M_contig819.19605.1Fucus serratus malemRNAF-serratus_M_contig819 187778..196537 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig819.19605.1 ID=prot_F-serratus_M_contig819.19605.1|Name=mRNA_F-serratus_M_contig819.19605.1|organism=Fucus serratus male|type=polypeptide|length=362bp
MKGSRQAEGEDEKRWTFFRFPARSSALRRSPAEAACTRGDWTTAADGTGG
AEANAGAGTRENVQAVGVGGLNVVAAGASADGRVQLKAPSRVMSLVRNRV
MQVSCGARHTLAVTADGQLFAWGDNRYGQCGLPRWGQRPQASTPSPSLSS
SSSSSYGTDEDLRGLSCGIGSVCWEVSATKRPKDFRFSFNGGTPGGRGRP
GIGGPRGKGNGGGEARVVVFQPTLVRAWEGRDDLPLRVLQVACGRFHSLA
IARSRRENFLQQGVSAPPSTSPTGAGTGTNLLLSWGRAGCGRLGRNPSLP
SQSSNGQSPSHPLSLSRRKAWYYRLIQPTSLRWQAVLVSVVSAAMPRWTG
VIPATPREIET*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009091RCC1/BLIP-II
IPR000408Reg_chr_condens