prot_F-serratus_M_contig819.19599.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig819.19599.1
Unique Nameprot_F-serratus_M_contig819.19599.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length296
Homology
BLAST of mRNA_F-serratus_M_contig819.19599.1 vs. uniprot
Match: D8LG66_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG66_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 1.630e-56
Identity = 107/204 (52.45%), Postives = 138/204 (67.65%), Query Frame = 0
Query:   97 AGAPRADGLSPEELEWM-------PEGMRNCVMFPPKTVEEVEEEERKAALA-WKDDGRKGRVLVRRREVPLPERDPVSVCQLVLQSLKINDDPMLNYGAAVAIKHASSRNPMRKMTPKDLGAFLQNDPEMVMLIANSDCRPAERAKISPDGTRVLQKVELVGSRTMQDDGWVKYGGGMERIVDVQLVKE-DGCWMIDAFSFQP 291
            AG+ R DG S      +       P+G+ N      KT+ E EEEE + A+  W+DDGRKGRVLVRR+E+P P  DP SVCQLV +SL+ NDDPML+YGAAVA+K ASS++ +R MTP + GAFL+NDP+ V+L+ N+ C PAERAK+S DG +VLQKVE+VG          +Y   + RIV+VQL KE D CW +DA +F P
Sbjct:   64 AGSSRWDGHSRRSSRLLAETNGIYPDGVPNLPGI--KTIVETEEEEEQRAVREWQDDGRKGRVLVRRKEIPSPAMDPASVCQLVFESLQNNDDPMLDYGAAVAVKFASSKSAVRNMTPAEYGAFLRNDPDQVLLVDNASCAPAERAKVSADGKQVLQKVEVVG----------RYPDVVRRIVEVQLTKEEDDCWRVDAMTFGP 255          
BLAST of mRNA_F-serratus_M_contig819.19599.1 vs. uniprot
Match: A0A7S1K9A5_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1K9A5_9ALVE)

HSP 1 Score: 66.6 bits (161), Expect = 5.860e-10
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 0
Query:  151 VLVRRREVPLPERDPVSVCQLVLQSLKINDDPMLNYGAAVAIKHASSRNPMRKMTPKDLGAFLQNDPEMVMLIANSDCRPAERAKISPDGTRVLQKVELVGS----RTMQDDGWVKYGGGMERIVDVQLVKEDGCWMID 285
            VL RR ++P P  D   V + VL +L+ NDDP L++GAAV IKHAS  N +    P   G++L+N  E  +L+           +   +    +Q+V L G     ++  D  + +      + VD +L    GCWMID
Sbjct:    3 VLERRGDLPQPGEDARVVIEKVLDALQTNDDPQLDHGAAVTIKHASRDNIISNFNPAQYGSYLRNS-EYRVLLNRDTFEFVGPPQYDSNKEHCVQRVVLEGHHPNFQSWSDREFFR------KEVDFRLSLHRGCWMID 134          
BLAST of mRNA_F-serratus_M_contig819.19599.1 vs. uniprot
Match: A0A0G4GLI9_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GLI9_VITBC)

HSP 1 Score: 66.6 bits (161), Expect = 2.640e-9
Identity = 46/139 (33.09%), Postives = 69/139 (49.64%), Query Frame = 0
Query:  151 VLVRRREVPLPERDPVSVCQLVLQSLKINDDPMLNYGAAVAIKHASSRNPMRKMTPKDLGAFLQNDPEMVMLIANSDCRPAERAKISPDGTRVLQKVELVGS----RTMQDDGWVKYGGGMERIVDVQLVKEDGCWMID 285
            VL RR ++P P  D   V + VL +L+ NDDP L++GAAV IKHAS  N +    P   G++L+N  E  +L+           +   +    +Q+V L G     ++  D  + +      + VD +L    GCWMID
Sbjct:   86 VLERRGDLPQPGEDARVVIEKVLDALQTNDDPQLDHGAAVTIKHASRDNIISNFNPAQYGSYLRNS-EYRVLLNRDTFEFVGPPQYDSNKEHCVQRVVLEGHHPNFQSWSDREFFR------KEVDFRLSLHRGCWMID 217          
BLAST of mRNA_F-serratus_M_contig819.19599.1 vs. uniprot
Match: A0A6H5KJ37_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJ37_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 6.350e-7
Identity = 45/133 (33.83%), Postives = 63/133 (47.37%), Query Frame = 0
Query:  159 PLPERDPVSVCQLVLQSLKINDDPMLNYGAAVAIKHASSRNPMRKMTPKDLGAFLQNDPEMVMLIANSD---CRPAERAKIS---PDGTRVLQKVELVGSRTMQDDGWVKYGGGMERIVDVQLVKEDGCWMID 285
            P PE  P  V  + LQ+L+  D P  N+G  +AI+ +S+ NP    TP  +  ++ +DP M      SD     P   A+I    PD  R  Q+V +   R   D  W          V + LVKEDGCW+I+
Sbjct:  116 PNPEHPPSHVAAVTLQALRRTDVPYTNFGCEIAIRFSSTSNPASGFTPGGMRTYI-DDPSMPFYRVLSDWDEMAPVGGAEIDVAEPD--RANQQVRV---RKEGDPAW--------STVSLDLVKEDGCWLIE 234          
BLAST of mRNA_F-serratus_M_contig819.19599.1 vs. uniprot
Match: A0A0G4G2B9_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4G2B9_9ALVE)

HSP 1 Score: 59.3 bits (142), Expect = 1.160e-6
Identity = 43/145 (29.66%), Postives = 68/145 (46.90%), Query Frame = 0
Query:  141 AWKDDGRKGRVLVRRREVPLPERDPVSVCQLVLQSLKINDDPMLNYGAAVAIKHASSRNPMRKMTPKDLGAFLQNDPEMVML-IANSDCRPAERAKISPDGTRVLQKVELVGSRTMQDDGWVKYGGGMERIVDVQLVKEDGCWMI 284
            AW+ D     ++ R  + P     P  V   V++ L++NDDP L++GAAV I+H++  + +R +TP   G FL+      +L  A  D    E   ++ D T + Q V + G      D + +        V   + KEDG W I
Sbjct:  103 AWEGDWE---IMRRTDQEPEEGEHPYKVIVKVMEGLQVNDDPQLDHGAAVVIRHSAKGSILRNLTPSQYGRFLRRTRYKCLLNFAEFDI--LEEPVLNEDKTELQQVVAIEGYLPNFQDYFARKH--FRENVKFDMKKEDGHWRI 240          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig819.19599.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LG66_ECTSI1.630e-5652.45Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S1K9A5_9ALVE5.860e-1033.09Hypothetical protein n=1 Tax=Vitrella brassicaform... [more]
A0A0G4GLI9_VITBC2.640e-933.09Uncharacterized protein n=1 Tax=Vitrella brassicaf... [more]
A0A6H5KJ37_9PHAE6.350e-733.83Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4G2B9_9ALVE1.160e-629.66Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..26
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..295
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..26
score: 0.515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig819contigF-serratus_M_contig819:95515..107399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig819.19599.1mRNA_F-serratus_M_contig819.19599.1Fucus serratus malemRNAF-serratus_M_contig819 95474..108234 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig819.19599.1 ID=prot_F-serratus_M_contig819.19599.1|Name=mRNA_F-serratus_M_contig819.19599.1|organism=Fucus serratus male|type=polypeptide|length=296bp
MRVTRNLKEVIVAASVAAAVLGPVEAFVGVQSTCSSSLIASTTCTRAISD
AATTTFTAVTCFGISDTTTSSAKRSATDIDMSLLLRGRTRRGQILAAGAP
RADGLSPEELEWMPEGMRNCVMFPPKTVEEVEEEERKAALAWKDDGRKGR
VLVRRREVPLPERDPVSVCQLVLQSLKINDDPMLNYGAAVAIKHASSRNP
MRKMTPKDLGAFLQNDPEMVMLIANSDCRPAERAKISPDGTRVLQKVELV
GSRTMQDDGWVKYGGGMERIVDVQLVKEDGCWMIDAFSFQPALAG*
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