mRNA_F-serratus_M_contig818.19588.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig818.19588.1
Unique NamemRNA_F-serratus_M_contig818.19588.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: D7FJT4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJT4_ECTSI)

HSP 1 Score: 337 bits (865), Expect = 9.310e-103
Identity = 225/443 (50.79%), Postives = 257/443 (58.01%), Query Frame = 2 
Query:  428 SCSGRHRSRRSGTRIADPAGHCTRTACLALMVFVLLGERTSGRSSSSFTPRADTNIGRTAWRGSQQQWQRRPQHEGAWQLLAWSPNVGAAPTIPTRRSTSTLHRSAKAPLPSPRSHSCRSEVVCAVAGGSTGSASRGLSPAAAASAPAQLYRV------------RRPXXXXXXXXQLGGVGQGLSSLEAEAATARDTLRSPRSAIGDDGRDYPESLNAYSVSDSTVTTVSPVAAEELRAETGVEA-AVAVEVGGVERPALPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQ-EGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPDRPGYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCEAAQRKRLR 1714
            SC      RR G  + D  G CTR AC A++  VLLG+ +S RSS                               AWQL A       A + P+ R+ ++L+   +  L         ++ V AV+                   PAQ+YRV            RR           GG   G SS+EA        L+SPRSA         E L AY+ S S             R  +  E     V   G  RPALP L +E+LTQLR GQRVQKQTR GGSGSGSVV+DVRADPDVVLGLLTKYE YAEMIDTVRECEVFPQ E  D RKV V VSRF+LHIRVVMS LR+RNMVQFELDPDCTKAGRAVLREATGFF+VESPPDRPG+SRVW+ A+VDVNRFVPG IVDYAAGRALPRASNW+KPTCEAAQR++LR
Sbjct:   42 SCHSSSSGRRRGAVVGDAFGTCTRVACAAVIALVLLGDNSSARSSLPSDXXXXXXXXXXXXXXM------------AWQLFA-----PKARSSPSERAAASLNLKRRTRL-------AGADSVSAVS-------------------PAQMYRVTEGSSSGRGRGQRRQHEQRFSRDDSGGREDGRSSIEA--------LQSPRSA---------ELLTAYA-SASXXXXXXXXXXXXXRPPSIAECIGGGVVTQGEGRPALPLLDDEDLTQLRAGQRVQKQTRQGGSGSGSVVVDVRADPDVVLGLLTKYEDYAEMIDTVRECEVFPQGETADSRKVGVMVSRFKLHIRVVMSLLRERNMVQFELDPDCTKAGRAVLREATGFFYVESPPDRPGFSRVWMLAKVDVNRFVPGAIVDYAAGRALPRASNWIKPTCEAAQRRKLR 423
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A835ZLE1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZLE1_9STRA)

HSP 1 Score: 189 bits (480), Expect = 5.400e-51
Identity = 101/188 (53.72%), Postives = 127/188 (67.55%), Query Frame = 2 
Query: 1160 RPA-LPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPD-RPGYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCEAAQRKRLRE 1717
            RPA LPELT EE   L  G+RVQ+QTR G SG+G VV+DVRAD    + +L  +  Y +MIDTVRE  +  Q G    K E  +SRF+L +RV++      + V+FELDPDC  AG++VL +A G ++VE PPD RPG+ R+WL A + V+  VPG +VDYAA RALPRAS WLKPTCE  QR   RE
Sbjct:   16 RPAFLPELTLEEKRTLARGERVQRQTRQGSSGTGLVVVDVRADAATAMEVLQSFAAYGDMIDTVREARILGQRG-GVTKAEFLISRFKLRVRVLLKSNPAASTVEFELDPDCKAAGKSVLNDARGIWYVERPPDCRPGHCRIWLVASLVVSGLVPGFLVDYAAARALPRASTWLKPTCERVQRSHERE 202
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A6S9HUN1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9HUN1_HETAK)

HSP 1 Score: 155 bits (391), Expect = 2.850e-38
Identity = 82/184 (44.57%), Postives = 112/184 (60.87%), Query Frame = 2 
Query: 1160 RPALPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPDRPG-YSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCEAAQRKR 1708
            RP LPELT +E  QLR G+R+Q+Q R G  G G   +DVRA  + V   LT Y +Y   I T+R+  VF    Q   K E  +SRFR  +R +M +  + + + F+LDPDC K    V + A GF+F E  P R   ++RVW+   V+VNR VPG +VD  A +ALP++SNW+KP  EA +R+R
Sbjct:  102 RPDLPELTSDEERQLRAGERIQRQNRVGKKGDGFACVDVRASLETVWATLTDYRRYPGRISTIRDAIVFSSSPQ-ATKAEFMISRFRFPVRAIMRYEPEASRLAFDLDPDC-KVPPGVFKSAAGFWFAEPAPGREATHTRVWIAGAVEVNRAVPGFVVDLGAQKALPKSSNWVKPVMEAEERRR 283
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A7S2C392_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C392_9STRA)

HSP 1 Score: 148 bits (374), Expect = 5.240e-36
Identity = 90/187 (48.13%), Postives = 114/187 (60.96%), Query Frame = 2 
Query: 1154 VERP-ALPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPD--RPGYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCEAAQRK 1705
            V RP ALP LT  +L  LR G  VQKQTRDG  GSG V +DV+A P+ V  LLT Y  Y  +IDTVR   V P   ++  +   T+S+FRL   VV  F  D   + FEL+        AVL+EA G +FVE+  +  R G+ RVWL A + V+R VP  IVDYAA RALPRA++WL+P  E  Q++
Sbjct:  101 VPRPSALPALTGNDLRCLRAGLSVQKQTRDGWVGSGCVAMDVKASPEAVWSLLTDYASYDSLIDTVRAAIVQPGATKEDARATFTLSKFRLKTAVVHRFNHDTQQLTFELEEG---GENAVLKEANGLWFVETEGEGLRDGHVRVWLQASLRVSRVVPKWIVDYAARRALPRATSWLRPAAEEKQKQ 284
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A6V1NKI5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NKI5_HETAK)

HSP 1 Score: 147 bits (370), Expect = 1.030e-35
Identity = 76/180 (42.22%), Postives = 117/180 (65.00%), Query Frame = 2 
Query: 1169 LPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPDRPGYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCEAAQRKR 1708
            LP LT EE   L  G+RV++QTR+G +G+G   +DV+A  + +  +L  +++Y + IDTVR  +VF ++ Q   K E  +SRF   +R V+++  + ++++F LDP+  K    V + ATG++F+E  P  P  +RVWL  ++ V+R +PG +VDY A RALPRAS+WLKPT E  +R R
Sbjct:   89 LPLLTLEEQKLLANGERVERQTREGKTGTGFACVDVKASQNTIWSVLLDFQRYPDYIDTVRGAKVFEEQSQTT-KAEFLISRFNFPVRTVLTYEEENSLLKFCLDPE-GKVPAGVFKFATGYWFLEESPSDPELTRVWLKGDLKVSRTIPGCVVDYGAKRALPRASSWLKPTLEQEERIR 266
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A7S0H7N8_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0H7N8_9CRYP)

HSP 1 Score: 144 bits (364), Expect = 2.840e-34
Identity = 81/179 (45.25%), Postives = 114/179 (63.69%), Query Frame = 2 
Query: 1160 RPALPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKR-KVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPDRP-GYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCE 1690
            RP LP LT+ E+++L  G RV+KQTR G  G G VV+DV+AD   V+ +L+  E+Y + I TVRE  + P      R K    +SRFRL +   +S  + RNM++F+LD   +  G +   EA GF+F+E  P+R  G++RVWL A+V  +  +P  IVDYAA RALPRA++WL+P  E
Sbjct:  100 RPPLPRLTDAEVSRLLAGDRVEKQTRSGLLGEGLVVVDVKADVSTVMAVLSDVERYPQRIATVREALIIPGTRSSVRCKARFKLSRFRLEVTADLSLNKFRNMLEFQLDR--SGMGSSAFDEARGFWFLEQCPEREEGWTRVWLSAKVRCSPLLPPFIVDYAASRALPRATSWLRPVIE 276
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A7S4M0K0_GUITH (Hypothetical protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4M0K0_GUITH)

HSP 1 Score: 142 bits (359), Expect = 1.790e-33
Identity = 80/179 (44.69%), Postives = 114/179 (63.69%), Query Frame = 2 
Query: 1160 RPALPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKR-KVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPDRP-GYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCE 1690
            RP LP L++ E+++L  G RV+KQ+R G  G G VV+DV+AD   V+ +L+  E+Y + I TVRE  + P      R K    +SRFRL +   +S  + RNM++F+LD   +  G +   EA GF+F+E  P+R  G++RVWL A+V  +  +P  IVDYAA RALPRA++WLKP  E
Sbjct:  114 RPPLPRLSDAEVSRLLAGDRVEKQSRSGLLGEGLVVVDVKADIPTVMAVLSDVERYPQRIATVREATIIPGTRSSVRCKARFKLSRFRLEVTADLSLNKFRNMLEFQLDR--SGMGSSAFDEARGFWFLEQCPEREEGWTRVWLSAKVRCSPLLPPFIVDYAASRALPRATSWLKPVIE 290
[Close]
BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A7S1EJW5_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1EJW5_HEMAN)

HSP 1 Score: 142 bits (358), Expect = 1.430e-32
Identity = 82/174 (47.13%), Postives = 110/174 (63.22%), Query Frame = 2 
Query: 1178 LTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRA-VLREATGFFFVESPPDRPG-YSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCEA 1693
            LT EE   L  G+RVQ+Q RDG  G+GSVV+DV+AD   V  +LT  E+Y E I TVR C +  + G    K +  +SRF L I  V+   R+ NM++FELD    K  RA ++ E+ GF+F+E  P R G Y+R+W+ A +  +  +P  +VDYAA RALPRA+ WLKPT EA
Sbjct:  219 LTPEEEATLLAGERVQRQERDGRVGTGSVVVDVKADISTVFAVLTDLERYVERIHTVRRCTI-TERGAMVAKAQFALSRFNLVINTVLRCDREANMLRFELD----KERRAPMVNESEGFWFLEEAPGRGGEYTRIWMSAGIKCSSLLPTFLVDYAAARALPRATAWLKPTIEA 387
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: A0A7S2SKJ0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKJ0_9STRA)

HSP 1 Score: 136 bits (342), Expect = 2.260e-32
Identity = 82/214 (38.32%), Postives = 124/214 (57.94%), Query Frame = 2 
Query: 1085 PVAAEELRAETGVEAAVAVEVGGVERPA-LPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPPD----RPGYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCEAAQRKRL 1711
            P+  E+LRA            G   +PA LP L+ E++  L  G+ VQ+QTRDG +G+G VV+D+ A P+ V  LL  +E+Y EMI TVR   + P    ++ +    +S+F L + VV  F R R  ++F LD   + +   V+++A GF++VE+P      +PG+ R+W  A + V+R VP  + DYAA RAL RA+ WL+PT   A++  L
Sbjct:   13 PLGLEQLRARPAP--------GSFSKPAGLPRLSREDIGHLADGKIVQRQTRDGVTGNGFVVMDLEASPETVWSLLLDFERYPEMISTVRSAALRPGSTLERARATFVLSKFLLEVNVVHQFDRRRQQLRFCLD---SASQNFVMKQADGFWYVETPDVAEGLKPGHVRIWFGASIRVSRIVPRWVTDYAAQRALRRATAWLRPTITEAEKASL 215
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BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Match: W7U413_9STRA (Polyketide_cyc domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U413_9STRA)

HSP 1 Score: 135 bits (341), Expect = 2.600e-30
Identity = 81/176 (46.02%), Postives = 112/176 (63.64%), Query Frame = 2 
Query: 1169 LPELTEEELTQLRLGQRVQKQTRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQDKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATGFFFVESPP-DRP-GYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKPTCE 1690
            LP L++E+L  LR GQRVQ Q R+G  GSG VV+DV AD   V   L  +E+YA+MI T+R+ ++  +      K   T+S+FR  + VV     + N + F LDPDC +  R++L  A GF+++E  P DRP G++RV++ A V VN  VP  +VDYAA RAL RA++WLKP  E
Sbjct:  172 LPGLSKEDLILLRAGQRVQHQIRNGCVGSGYVVVDVLADSATVWNTLLGFERYADMIPTIRKVKITSR-WPSLTKGVFTLSKFRFRLSVVHKHAPEENRLNFYLDPDCQQY-RSILEMAEGFWYIEDQPADRPEGWTRVYMSATVKVNSLVPMWLVDYAAERALKRATSWLKPYVE 345
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig818.19588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJT4_ECTSI9.310e-10350.79Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZLE1_9STRA5.400e-5153.72Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6S9HUN1_HETAK2.850e-3844.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2C392_9STRA5.240e-3648.13Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A6V1NKI5_HETAK1.030e-3542.22Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S0H7N8_9CRYP2.840e-3445.25Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
A0A7S4M0K0_GUITH1.790e-3344.69Hypothetical protein n=1 Tax=Guillardia theta TaxI... [more]
A0A7S1EJW5_HEMAN1.430e-3247.13Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S2SKJ0_9STRA2.260e-3238.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
W7U413_9STRA2.600e-3046.02Polyketide_cyc domain-containing protein n=3 Tax=M... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig818contigF-serratus_M_contig818:72320..78463 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.0
Seed ortholog evalue3.5e-93
Seed eggNOG ortholog2880.D7FJT4
Hectar predicted targeting categoryother localisation
EggNOG OGs2E0V1@1,2S88H@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size3002
Cds size1413
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig818.19588.1prot_F-serratus_M_contig818.19588.1Fucus serratus malepolypeptideF-serratus_M_contig818 73578..78132 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932435.974229-UTR-F-serratus_M_contig818:72319..735771622932435.974229-UTR-F-serratus_M_contig818:72319..73577Fucus serratus maleUTRF-serratus_M_contig818 72320..73577 -
1690964307.9129446-UTR-F-serratus_M_contig818:72319..735771690964307.9129446-UTR-F-serratus_M_contig818:72319..73577Fucus serratus maleUTRF-serratus_M_contig818 72320..73577 -
1622932436.058421-UTR-F-serratus_M_contig818:78132..784631622932436.058421-UTR-F-serratus_M_contig818:78132..78463Fucus serratus maleUTRF-serratus_M_contig818 78133..78463 -
1690964307.9621465-UTR-F-serratus_M_contig818:78132..784631690964307.9621465-UTR-F-serratus_M_contig818:78132..78463Fucus serratus maleUTRF-serratus_M_contig818 78133..78463 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622932435.996005-CDS-F-serratus_M_contig818:73577..739281622932435.996005-CDS-F-serratus_M_contig818:73577..73928Fucus serratus maleCDSF-serratus_M_contig818 73578..73928 -
1690964307.929088-CDS-F-serratus_M_contig818:73577..739281690964307.929088-CDS-F-serratus_M_contig818:73577..73928Fucus serratus maleCDSF-serratus_M_contig818 73578..73928 -
1622932436.012146-CDS-F-serratus_M_contig818:75523..763601622932436.012146-CDS-F-serratus_M_contig818:75523..76360Fucus serratus maleCDSF-serratus_M_contig818 75524..76360 -
1690964307.940574-CDS-F-serratus_M_contig818:75523..763601690964307.940574-CDS-F-serratus_M_contig818:75523..76360Fucus serratus maleCDSF-serratus_M_contig818 75524..76360 -
1622932436.0379083-CDS-F-serratus_M_contig818:77907..781321622932436.0379083-CDS-F-serratus_M_contig818:77907..78132Fucus serratus maleCDSF-serratus_M_contig818 77908..78132 -
1690964307.9516172-CDS-F-serratus_M_contig818:77907..781321690964307.9516172-CDS-F-serratus_M_contig818:77907..78132Fucus serratus maleCDSF-serratus_M_contig818 77908..78132 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig818.19588.1

>prot_F-serratus_M_contig818.19588.1 ID=prot_F-serratus_M_contig818.19588.1|Name=mRNA_F-serratus_M_contig818.19588.1|organism=Fucus serratus male|type=polypeptide|length=471bp
MVSSLLIGKTRVWEPSTTTVASIKLDCARPGGSCSGRHRSRRSGTRIADP
AGHCTRTACLALMVFVLLGERTSGRSSSSFTPRADTNIGRTAWRGSQQQW
QRRPQHEGAWQLLAWSPNVGAAPTIPTRRSTSTLHRSAKAPLPSPRSHSC
RSEVVCAVAGGSTGSASRGLSPAAAASAPAQLYRVRRPRGQDQGQGQLGG
VGQGLSSLEAEAATARDTLRSPRSAIGDDGRDYPESLNAYSVSDSTVTTV
SPVAAEELRAETGVEAAVAVEVGGVERPALPELTEEELTQLRLGQRVQKQ
TRDGGSGSGSVVLDVRADPDVVLGLLTKYEKYAEMIDTVRECEVFPQEGQ
DKRKVEVTVSRFRLHIRVVMSFLRDRNMVQFELDPDCTKAGRAVLREATG
FFFVESPPDRPGYSRVWLCAEVDVNRFVPGVIVDYAAGRALPRASNWLKP
TCEAAQRKRLRELASTKGRA*
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mRNA from alignment at F-serratus_M_contig818:72320..78463-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig818.19588.1 ID=mRNA_F-serratus_M_contig818.19588.1|Name=mRNA_F-serratus_M_contig818.19588.1|organism=Fucus serratus male|type=mRNA|length=6144bp|location=Sequence derived from alignment at F-serratus_M_contig818:72320..78463- (Fucus serratus male)
CGATAAGGCTGTGTCGTAGGCCTGACGACGACGTGATCTGAGACATGAAC
GCGCTGGCTTCATAACCTCTATTTTGGTCGGCTGGCTTGGATAACAAATC
AAGCGATAACGTGCATCCTGCGAGTGATACGTCGAGTCTAAAGCCATAAG
GGCAGCGCTGCACCCCTCGACAGGGAGATTCCTACAGTGTACTGCTGTAC
TACCAGGCACCATCGCGGATTGTTTCAACTCTTCGATACCCCCATAGTTT
GGGAAGAGTTAGCTTCACCGCACGCATCGGTGGTACTCGACGGCGGTGGT
CCGGAGTTCTTGTCAGCCCTGTTTGGTAAAGATGGTGTCGTCGCTATTGA
TTGGGAAGACCAGAGTTTGGGAACCCTCGACAACTACAGTCGCCTCAATC
AAACTCGACTGTGCGCGACCAGGCGGCTCATGCAGTGGCCGCCACAGATC
CCGCCGATCCGGTACAAGAATAGCAGATCCCGCTGGACACTGCACCCGGA
CAGCTTGTCTCGCGTTGATGGTCTTTGTGCTGCTAGGGGAGAGAACGTCT
GGGAGGGTGAGTGTGAGATTGACGCTGCTCGCGAAGCGACTTAAGCTAGA
GCACGTCATGCGCCTTACTGCTGGGCCTTCGGTCTCAGAGAGCTCGTGAA
TTTATCTGCGTCGCGATCCGTTGGCCTCCGTAACGACATTCCTTAATAAT
TAAACCGCAACATATCAGCCTCGGCGGAGTCAATCGTCTTTCAAATGCTA
CAATACAGAGTCAATTCTCCTGCGTCCCGTGCTGTATTTACCTTTGTCGC
GCCTGTAGCCCCATGAGTACAGTATTTTACAGCGCTGTAGAAGTGAAGTC
GGACCAGTTTCGACCGAGGCAGAACCTATTCACAACCCATTTACAGCAGT
ACTCTTGTCCATTTTGATTCTTGTGCTCTATGAAATACATATATTCTGGA
AATACTGTCTGTGCCGACTCTTGCTAGCCACCGGCAGGTTTCTAGATGTA
CCTTGCAGATTTAGTGCAGCTCCTTGCGCCCTGTTTTGACCGAGGCATGG
TCGTGGCTCTGCATTTTCGGGTTTCTTGATCTCGACATTGCACGAGCTGC
TTGACACGTTGGGTATGGCTTCCCTAACCCCTTCGTACAGACAGCACAGC
TAGCTCAGTAGTCAGTACCGCCACGAGTAATTACGTGATTCACCCTTCTT
TCCTTCTGTCTTTTCCACCTGACACTGAAGTGAAGTACGTATGCGCAGAA
TTTTACAACAACCAAATTTATCGAGTCAGAAATTACTGTATACAAGAGTC
GGCGATGTTTCACCCAGAGAAGTGGAACACATTTTCGTATTGACCTCTTT
CTGTCCAGCAGACCACGTACCGGATTGGCAACCACGTAAATTACTGGGTA
TGGTTGAGGCCCGATCGGTTAATGTGAAGAAAACAACATTAAAGTATTGT
ATTTATACTGTAAGTAATTTAGTACTGGCAATCAATGTGGCCTTCGGACC
ATACTGCACACTGCCCCTGGCCGACCACCGGCTCTTTCTGCCGTCAGCTA
CAAAACGATGGAAAATGTTTCCTAAGGTACAGCAGTATTATAGCACTTTG
GGTTTGTTTGAAGAAAAGGCCGAACGCATTCAAGGCTTCCTTGTTGTGTC
CTCCACTCAAAACGGCGATACAGAGTCATCATGTGTGTATAGCAAACAGT
ATCATTATACCAGCACGTCACAACGGACAATCCCTGCCGCTTAGTAGGAA
TGGGGAGGATTGAGTCAGAGTGAGTGATCACGTTCCTCATCACGAGGGCA
GCGTCATTCCCCTTCTCTCCCTAAACTGAATCACCTCCCCGCAAGGAGCA
CTGTTAACAGTTTTGTAGTTGTTAACTCAGCTCTACTGTACAATTACCGC
TGATGTGTGGGGATCAGAATCCATTCAAGCACCACTATTAATGGAAGACT
TCCTGGTCAACGTGTCACAACTCTAATACGTAGCCCCACGTACTCCGAAC
CTCCGCGTAACGACAGCGTATTCTCATGCCTCACAACACGCGCGTGCTCT
ACTCCCCCGATCCTCCCCCCCCCCCACCAAACAAAACTTCGGCGGGCGTC
CAGTCATCATCGTCATTCACGCCGCGAGCTGACACCAACATTGGCAGAAC
GGCGTGGCGAGGCAGCCAGCAGCAGTGGCAACGGCGACCCCAGCACGAAG
GAGCGTGGCAGCTCTTGGCGTGGTCGCCGAACGTGGGTGCTGCGCCTACT
ATACCCACGCGTCGCTCTACCTCAACACTACATCGCAGCGCAAAGGCGCC
GCTCCCCTCCCCCAGGAGTCATAGCTGTCGATCCGAGGTGGTTTGCGCGG
TAGCCGGCGGCTCGACCGGTTCGGCTAGCAGAGGTTTAAGCCCCGCAGCG
GCCGCCTCCGCTCCTGCCCAGCTGTACAGAGTGAGGCGACCTCGGGGCCA
GGATCAAGGGCAGGGACAGCTAGGGGGGGTAGGGCAGGGGTTATCATCGC
TCGAAGCCGAAGCAGCCACCGCGCGAGATACCCTGCGTTCGCCGAGATCC
GCCATCGGTGATGACGGTCGCGATTACCCCGAAAGCCTGAATGCGTATTC
CGTCTCTGACTCCACGGTTACCACTGTATCGCCCGTTGCGGCCGAGGAGC
TCAGAGCTGAGACTGGAGTAGAAGCGGCGGTTGCGGTGGAGGTAGGCGGG
GTCGAGCGACCAGCGCTGCCAGAACTGACGGAGGAGGAACTCACGCAGCT
CCGCTTGGGGCAAAGGGTGCAAAAGCAGACGCGAGACGGGGGTTCGGGTT
CGGGCAGCGTGGTGTTGGACGTACGAGCGGACCCCGACGTGGTACTGGGG
CTGCTGACGAAGTACGAGAAGTACGCGGAGATGATCGACACGGTGCGGGA
ATGCGAGGTGTTTCCGCAAGAAGGGCAAGATAAGCGGAAGGTGAAGGAAA
TGAATACACCAGCCAGCGTTCAGCGTGCCTTCAGGCCCTTAAGCCTCTCA
TTTCCTAAGCTGTGGTGATCATTTTTGGCTTGTCTTTGAAAGTCTCAAGA
GTGTTGTCGTTAAACCTTGGCCCATGTGTGGAAGAAACACGGATGCTTCG
ACCCCCAATCAAGTGAAAGACTTGTCGGAGTTTTGAATCGTTTTTTTGAG
TCGTTTGGTTCGACGCGTTGTGCATGTCGGTTTACGCGAATAACCACGTC
GAGGTATACGATAAATGCAACGCGCGATGAAAAACCGAGACCACTGATCC
TTCTGCCGCCTGAGATTTGAGGTGCTGAAGGTGCATTCGAGAAATCTCTT
GATTTTTCTTGATTTCGTGCGTGGATCTAAGATTACCAAATCTATAATCT
CATATGGGTCAACTTGTACAGCACAAGACAGTATATAATTGTGTGTTTGT
ACGTGTTCCTTACACTATACGATCGGACCTCAACCATACCCAGTAAAATA
AGCGGTTGCCCATCCATGACGTGGTCTGCTGGTCAGAAAGCATACACACA
CTCGGGTACAAAAGTATAAGCAGCATTGCATTGCCGACCTTTGTCCTGTA
GGAATAACTATTACGGTCATACGTGTGTGTGTGAGTGTGTGTGTATTTTT
CGAAGTGTACCTAACCACGCAATCCGGCCCTGTCATCCTAGTCATTCTAT
GCCGCTTGCATCGATCCTCCCAAGGGGGGAGACGGTTTCGTAGTAGGTAA
CAAATAAATGGTATATTGATTGTATTTCTGTAATAGTTCCTATATTTCCT
CTTCTCGGTGAGAAGTCGATGGGCATCATACATGATCTTAGCCGGAGATA
ATCACGCCCACACAGATGCGCTTTAATATCAGCGAGAGCTTGCCCGCAAC
TGTTTCCGTATACCGGGTCATTAGCAACAGCAGCAGCAGCGGCGGGGGAC
GAGAGAATGAGTCCGTCTACGCGTTATGATGAAGTTAGATACGCTAGTTT
TTGGAAAGCCTGAATAAAGAAATTAAGTCATTTTTTTCAGGAAAGATCAT
TTTTAAACGTTCGAGGTATTCTAAGCCCTGTCTAAACTACAGTATGTAAT
ACTGTTAATGAAAAACGAAAAGCTAAACAGACATTATTTGATTTATCTTA
GTTACTGGAACAGAAAAAAAGTGTTGAAATTTGATTTCGAAGTATGTAAG
CGTCAATAATGACGATATCGATACAGATCATATCTGCTCTATGAAATATT
TTAAAGAGTGTTTATGATAGATTTGGCAGAAAAGAGTGATATCGGTGTAT
TTGACGAATAACAAAATCGTTGTCTTTGTTAGCATTTCATGAAAAAAATC
TCGTTAAATCTTGTAATGTACTGCTATTCAATCGAAAGTTATAGGACATG
CACTGGTCTTATGATTCACATTAGCCCAGAACGTCCTCGTCTCCGCTCTG
TGCCCGTACCAAGCTCCACGGTGCAACGTGAGCATTGATCGATCGCAAAT
CCAGCAGTCGCTAAAAACACACCTATATAGTCTGGCCGACTGACTCTCGT
GTCCCGCTGCGACTATTAATACGTACGTTTGTCAGGTGGAGGTGACAGTC
AGCAGATTTCGCCTACACATACGCGTAGTGATGTCCTTTCTGAGGGATCG
AAACATGGTGCAGTTCGAGCTGGACCCGGACTGCACCAAGGCGGGTCGTG
CGGTACTGCGGGAGGCGACGGGATTCTTCTTCGTGGAGTCGCCGCCCGAC
AGGCCGGGCTACTCGCGCGTCTGGTTGTGCGCCGAGGTGGACGTGAACCG
CTTCGTGCCGGGGGTGATCGTCGATTACGCCGCGGGCCGCGCGCTGCCTC
GAGCCTCGAACTGGTTAAAGCCCACGTGCGAGGCCGCGCAGCGAAAAAGA
CTTCGTGAGCTGGCTTCGACGAAGGGGCGCGCATGATTGTGAGGTCTTTC
GTACAAAAAGGAGGACAGGATCGAGTGGGAAGGCGTGTGTCGCGTTGTTG
TCAGTTCAGTGTGGTCCGATGAAACGGAACTACAGGCTCAGTTGTATTGT
TTTGGAAGGCGTTCTTCCACGATTGTCGTTACCGGAGGCCGCAGTATCCC
TTCGCTTTTCGCTTGGGGCCATGTCAAATCTTTGGGATACTGAGGGTGTC
CGGACGAGAAGTAGGAGCTGTTATGAACCTACGGAACGAAGGATGGCCGA
ACTAAGTGTGAAGGTCTTGTAGTTTGCTTGAGGCGTGTTTTTGACAAGAT
AGTAAAAATCGCGTAAGCGGGCGGGACCACACCAGATACGCTGTAGCGTG
CGCGGACTGAGCCTTTGCGGGGCTTCAAGTCGAGTGCGCCAGCGTGCTTT
CGGGAGAGCATTCGTTTGATCGGGTAGCGTGATGTCGACAGCGTGCTCTA
TGGCGTTGTCTTGATCAGCGGATGCGTCTCGCAGAATCTTGGATGTGTTG
CTTTTTGAGCTACAATGAGGAAGAAACCAATGTCAGACTTGTGTTCCTTC
GCCCAGCTCTCGTACTCATAACTGCAGTATTTTTTGCGTTATAGAGTGGT
CCTTGCGCGGTTGGTCACGATAATGTGCATGGTGCAGCACGTTCGCTGCC
ATCAATAGCTGTATAACTTTCGCGTTTAAAAAAAACGGAGCTTGTATAGT
GGATCTATAAGCTCGGCGTGACTCCTTTGTAAAGGCAGTTTGACGGAAGC
AGGTGAGGAGCGTGACGCCGTCGCGGCAGAGAGGGCGAAGGGGAAGAGCA
ACCCTTTTTGATGACGAATACCAATATCAATTATGTGATGTTTTGCTGTT
CCGTCGGTCGAATGGACGGAAATCGATAGGTATAGGTTTGGTTTTTGCGA
CGATGTGTGACAAGGAATAATTCAATGGCAGGTTGGCTCGTGGATTTTTT
ATGTGTGCGATAGGAAAGACGGCTTTGAAAAAAACGACTGAGTAGTGTGA
CCATGTTTGCCATTAGAATCACTCTTTCTCGAGAGATTACCTACCGGTCG
TCGCAGTTGTAGTAGCTTGTGCAGGGGAAGAAAGCGAGCTTGAAACGCCC
CCGAAGGAAAGGGAGGCCGCAGACTCTCTCTACGCCCCCATGGTGCTCTA
AGATAGACCGGACGCAACCATCTCTCATCCGATCGCGACAGGCGATGAAC
TGGATGCGGGTTTCTGTGCAATGGAGGCGGAACCTCGAGCTAGA
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Coding sequence (CDS) from alignment at F-serratus_M_contig818:72320..78463-

>mRNA_F-serratus_M_contig818.19588.1 ID=mRNA_F-serratus_M_contig818.19588.1|Name=mRNA_F-serratus_M_contig818.19588.1|organism=Fucus serratus male|type=CDS|length=2826bp|location=Sequence derived from alignment at F-serratus_M_contig818:72320..78463- (Fucus serratus male)
ATGGTGTCGTCGCTATTGATTGGGAAGACCAGAGTTTGGGAACCCTCGAC
AACTACAGTCGCCTCAATCAAACTCGACTGTGCGCGACCAGGCGGCTCAT
GCAGTGGCCGCCACAGATCCCGCCGATCCGGTACAAGAATAGCAGATCCC
GCTGGACACTGCACCCGGACAGCTTGTCTCGCGTTGATGGTCTTTGTGCT
GCTAGGGGAGAGAACGTCTGGGAGGATGGTGTCGTCGCTATTGATTGGGA
AGACCAGAGTTTGGGAACCCTCGACAACTACAGTCGCCTCAATCAAACTC
GACTGTGCGCGACCAGGCGGCTCATGCAGTGGCCGCCACAGATCCCGCCG
ATCCGGTACAAGAATAGCAGATCCCGCTGGACACTGCACCCGGACAGCTT
GTCTCGCGTTGATGGTCTTTGTGCTGCTAGGGGAGAGAACGTCTGGGAGG
TCATCATCGTCATTCACGCCGCGAGCTGACACCAACATTGGCAGAACGGC
GTGGCGAGGCAGCCAGCAGCAGTGGCAACGGCGACCCCAGCACGAAGGAG
CGTGGCAGCTCTTGGCGTGGTCGCCGAACGTGGGTGCTGCGCCTACTATA
CCCACGCGTCGCTCTACCTCAACACTACATCGCAGCGCAAAGGCGCCGCT
CCCCTCCCCCAGGAGTCATAGCTGTCGATCCGAGGTGGTTTGCGCGGTAG
CCGGCGGCTCGACCGGTTCGGCTAGCAGAGGTTTAAGCCCCGCAGCGGCC
GCCTCCGCTCCTGCCCAGCTGTACAGAGTGAGGCGACCTCGGGGCCAGGA
TCAAGGGCAGGGACAGCTAGGGGGGGTAGGGCAGGGGTTATCATCGCTCG
AAGCCGAAGCAGCCACCGCGCGAGATACCCTGCGTTCGCCGAGATCCGCC
ATCGGTGATGACGGTCGCGATTACCCCGAAAGCCTGAATGCGTATTCCGT
CTCTGACTCCACGGTTACCACTGTATCGCCCGTTGCGGCCGAGGAGCTCA
GAGCTGAGACTGGAGTAGAAGCGGCGGTTGCGGTGGAGGTAGGCGGGGTC
GAGCGACCAGCGCTGCCAGAACTGACGGAGGAGGAACTCACGCAGCTCCG
CTTGGGGCAAAGGGTGCAAAAGCAGACGCGAGACGGGGGTTCGGGTTCGG
GCAGCGTGGTGTTGGACGTACGAGCGGACCCCGACGTGGTACTGGGGCTG
CTGACGAAGTACGAGAAGTACGCGGAGATGATCGACACGGTGCGGGAATG
CGAGGTGTTTCCGCAAGAAGGGCAAGATAAGCGGAAGTCATCATCGTCAT
TCACGCCGCGAGCTGACACCAACATTGGCAGAACGGCGTGGCGAGGCAGC
CAGCAGCAGTGGCAACGGCGACCCCAGCACGAAGGAGCGTGGCAGCTCTT
GGCGTGGTCGCCGAACGTGGGTGCTGCGCCTACTATACCCACGCGTCGCT
CTACCTCAACACTACATCGCAGCGCAAAGGCGCCGCTCCCCTCCCCCAGG
AGTCATAGCTGTCGATCCGAGGTGGTTTGCGCGGTAGCCGGCGGCTCGAC
CGGTTCGGCTAGCAGAGGTTTAAGCCCCGCAGCGGCCGCCTCCGCTCCTG
CCCAGCTGTACAGAGTGAGGCGACCTCGGGGCCAGGATCAAGGGCAGGGA
CAGCTAGGGGGGGTAGGGCAGGGGTTATCATCGCTCGAAGCCGAAGCAGC
CACCGCGCGAGATACCCTGCGTTCGCCGAGATCCGCCATCGGTGATGACG
GTCGCGATTACCCCGAAAGCCTGAATGCGTATTCCGTCTCTGACTCCACG
GTTACCACTGTATCGCCCGTTGCGGCCGAGGAGCTCAGAGCTGAGACTGG
AGTAGAAGCGGCGGTTGCGGTGGAGGTAGGCGGGGTCGAGCGACCAGCGC
TGCCAGAACTGACGGAGGAGGAACTCACGCAGCTCCGCTTGGGGCAAAGG
GTGCAAAAGCAGACGCGAGACGGGGGTTCGGGTTCGGGCAGCGTGGTGTT
GGACGTACGAGCGGACCCCGACGTGGTACTGGGGCTGCTGACGAAGTACG
AGAAGTACGCGGAGATGATCGACACGGTGCGGGAATGCGAGGTGTTTCCG
CAAGAAGGGCAAGATAAGCGGAAGGTGGAGGTGACAGTCAGCAGATTTCG
CCTACACATACGCGTAGTGATGTCCTTTCTGAGGGATCGAAACATGGTGC
AGTTCGAGCTGGACCCGGACTGCACCAAGGCGGGTCGTGCGGTACTGCGG
GAGGCGACGGGATTCTTCTTCGTGGAGTCGCCGCCCGACAGGCCGGGCTA
CTCGCGCGTCTGGTTGTGCGCCGAGGTGGACGTGAACCGCTTCGTGCCGG
GGGTGATCGTCGATTACGCCGCGGGCCGCGCGCTGCCTCGAGCCTCGAAC
TGGTTAAAGCCCACGTGCGAGGCCGCGCAGCGAAAAAGACTTCGTGAGCT
GGCTTCGACGAAGGGGCGCGCATGAGTGGAGGTGACAGTCAGCAGATTTC
GCCTACACATACGCGTAGTGATGTCCTTTCTGAGGGATCGAAACATGGTG
CAGTTCGAGCTGGACCCGGACTGCACCAAGGCGGGTCGTGCGGTACTGCG
GGAGGCGACGGGATTCTTCTTCGTGGAGTCGCCGCCCGACAGGCCGGGCT
ACTCGCGCGTCTGGTTGTGCGCCGAGGTGGACGTGAACCGCTTCGTGCCG
GGGGTGATCGTCGATTACGCCGCGGGCCGCGCGCTGCCTCGAGCCTCGAA
CTGGTTAAAGCCCACGTGCGAGGCCGCGCAGCGAAAAAGACTTCGTGAGC
TGGCTTCGACGAAGGGGCGCGCATGA
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